Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10n15
(842 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025214-1|ABF17905.1| 431|Drosophila melanogaster FI01031p pro... 30 3.5
BT001812-1|AAN71567.1| 431|Drosophila melanogaster RH35726p pro... 30 3.5
AE014298-992|AAF46234.1| 431|Drosophila melanogaster CG3032-PA ... 30 3.5
AF125384-1|AAD28508.1| 1270|Drosophila melanogaster L82A protein. 29 6.0
AE014297-212|ABI31139.1| 1314|Drosophila melanogaster CG32464-PP... 29 6.0
AE014297-211|AAZ52515.1| 1270|Drosophila melanogaster CG32464-PN... 29 6.0
AE014297-210|AAN13270.1| 1270|Drosophila melanogaster CG32464-PL... 29 6.0
AE014297-209|AAN13269.1| 1270|Drosophila melanogaster CG32464-PJ... 29 6.0
AE014297-208|AAF52045.2| 1270|Drosophila melanogaster CG32464-PB... 29 6.0
>BT025214-1|ABF17905.1| 431|Drosophila melanogaster FI01031p
protein.
Length = 431
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -2
Query: 700 KRPFNADRCIKNFSLLGNEY----HVLVSSLQRVLNDQLMCLLKDIFTNKFDYKIKRRLN 533
KRPF D+C K +S +G Y V +R DQ C + I+T++ + +RL
Sbjct: 183 KRPFQCDQCEKAYSFMGGLYTHIREVHAPKERRHPCDQPGC--ERIYTSRIAMQKHKRLK 240
Query: 532 HLKR 521
H R
Sbjct: 241 HSPR 244
>BT001812-1|AAN71567.1| 431|Drosophila melanogaster RH35726p
protein.
Length = 431
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -2
Query: 700 KRPFNADRCIKNFSLLGNEY----HVLVSSLQRVLNDQLMCLLKDIFTNKFDYKIKRRLN 533
KRPF D+C K +S +G Y V +R DQ C + I+T++ + +RL
Sbjct: 183 KRPFQCDQCEKAYSFMGGLYTHIREVHAPKERRHPCDQPGC--ERIYTSRIAMQKHKRLK 240
Query: 532 HLKR 521
H R
Sbjct: 241 HSPR 244
>AE014298-992|AAF46234.1| 431|Drosophila melanogaster CG3032-PA
protein.
Length = 431
Score = 30.3 bits (65), Expect = 3.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -2
Query: 700 KRPFNADRCIKNFSLLGNEY----HVLVSSLQRVLNDQLMCLLKDIFTNKFDYKIKRRLN 533
KRPF D+C K +S +G Y V +R DQ C + I+T++ + +RL
Sbjct: 183 KRPFQCDQCEKAYSFMGGLYTHIREVHAPKERRHPCDQPGC--ERIYTSRIAMQKHKRLK 240
Query: 532 HLKR 521
H R
Sbjct: 241 HSPR 244
>AF125384-1|AAD28508.1| 1270|Drosophila melanogaster L82A protein.
Length = 1270
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 654 RSEKFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYALVISICSANLTKS 833
+S+K +RS++ F+ R +KN+ KDS + ++ S S TP + I S ++
Sbjct: 65 KSDKSQKRRSSIAVSFLRRDSSKNSTKDSYESAVRSEKSDGSGTPTSPEIVYSSEENIRA 124
Query: 834 NS 839
+S
Sbjct: 125 SS 126
>AE014297-212|ABI31139.1| 1314|Drosophila melanogaster CG32464-PP,
isoform P protein.
Length = 1314
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 654 RSEKFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYALVISICSANLTKS 833
+S+K +RS++ F+ R +KN+ KDS + ++ S S TP + I S ++
Sbjct: 65 KSDKSQKRRSSIAVSFLRRDSSKNSTKDSYESAVRSEKSDGSGTPTSPEIVYSSEENIRA 124
Query: 834 NS 839
+S
Sbjct: 125 SS 126
>AE014297-211|AAZ52515.1| 1270|Drosophila melanogaster CG32464-PN,
isoform N protein.
Length = 1270
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 654 RSEKFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYALVISICSANLTKS 833
+S+K +RS++ F+ R +KN+ KDS + ++ S S TP + I S ++
Sbjct: 65 KSDKSQKRRSSIAVSFLRRDSSKNSTKDSYESAVRSEKSDGSGTPTSPEIVYSSEENIRA 124
Query: 834 NS 839
+S
Sbjct: 125 SS 126
>AE014297-210|AAN13270.1| 1270|Drosophila melanogaster CG32464-PL,
isoform L protein.
Length = 1270
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 654 RSEKFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYALVISICSANLTKS 833
+S+K +RS++ F+ R +KN+ KDS + ++ S S TP + I S ++
Sbjct: 65 KSDKSQKRRSSIAVSFLRRDSSKNSTKDSYESAVRSEKSDGSGTPTSPEIVYSSEENIRA 124
Query: 834 NS 839
+S
Sbjct: 125 SS 126
>AE014297-209|AAN13269.1| 1270|Drosophila melanogaster CG32464-PJ,
isoform J protein.
Length = 1270
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 654 RSEKFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYALVISICSANLTKS 833
+S+K +RS++ F+ R +KN+ KDS + ++ S S TP + I S ++
Sbjct: 65 KSDKSQKRRSSIAVSFLRRDSSKNSTKDSYESAVRSEKSDGSGTPTSPEIVYSSEENIRA 124
Query: 834 NS 839
+S
Sbjct: 125 SS 126
>AE014297-208|AAF52045.2| 1270|Drosophila melanogaster CG32464-PB,
isoform B protein.
Length = 1270
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 654 RSEKFLMQRSALKGRFIMRTLTKNTLKDSGAVVILTQLSVYSSTPYALVISICSANLTKS 833
+S+K +RS++ F+ R +KN+ KDS + ++ S S TP + I S ++
Sbjct: 65 KSDKSQKRRSSIAVSFLRRDSSKNSTKDSYESAVRSEKSDGSGTPTSPEIVYSSEENIRA 124
Query: 834 NS 839
+S
Sbjct: 125 SS 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,253,392
Number of Sequences: 53049
Number of extensions: 699838
Number of successful extensions: 1730
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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