Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10n09
(836 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1288|AAN12044.1| 923|Drosophila melanogaster CG14837-P... 31 2.0
BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p pro... 30 3.4
AY058244-1|AAL13473.1| 796|Drosophila melanogaster GH01087p pro... 30 3.4
AE014297-1919|AAF55113.1| 796|Drosophila melanogaster CG7262-PA... 30 3.4
AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA... 30 3.4
AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD... 30 3.4
AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE... 30 3.4
AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB... 30 3.4
AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC... 30 3.4
AE013599-2370|AAF57935.1| 394|Drosophila melanogaster CG6472-PA... 29 7.9
>AE014296-1288|AAN12044.1| 923|Drosophila melanogaster CG14837-PB,
isoform B protein.
Length = 923
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/88 (21%), Positives = 48/88 (54%)
Frame = -2
Query: 775 NQFLELSNVMTGVRNQNVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQL 596
N+F S+ + + L L+TAK+ + T + + +E+ ++ + T LD+ ++
Sbjct: 183 NKFGRTSHYYNNKPHASETLTTTLDTAKETVGTAVAGITTELGNAFKEGTQALDEAKHKV 242
Query: 595 LEAINTMQQTQRNELNNTNSILTNLASS 512
+E ++ +++ Q +E + T+ + ++SS
Sbjct: 243 MEGLH-LEEPQVSE-SKTDPVEATMSSS 268
>BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p protein.
Length = 887
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -2
Query: 727 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 548
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 799 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 858
Query: 547 NTNSILTNLASS 512
N NS+LT+ A++
Sbjct: 859 NNNSLLTSTAAT 870
>AY058244-1|AAL13473.1| 796|Drosophila melanogaster GH01087p
protein.
Length = 796
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = -2
Query: 691 DVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAI-----NTMQQTQRNELNNTNSILT 527
DV+L + L E+ LPD+ + ++A++ + + ++++QTQ +L L+
Sbjct: 711 DVVLGNVKQLSGEVIKVLPDVIVAAMEIAQKQYKQLKAGSGSSLEQTQMQQLRQRAKALS 770
Query: 526 NLASS 512
N+A++
Sbjct: 771 NMAAT 775
>AE014297-1919|AAF55113.1| 796|Drosophila melanogaster CG7262-PA
protein.
Length = 796
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Frame = -2
Query: 691 DVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAI-----NTMQQTQRNELNNTNSILT 527
DV+L + L E+ LPD+ + ++A++ + + ++++QTQ +L L+
Sbjct: 711 DVVLGNVKQLSGEVIKVLPDVIVAAMEIAQKQYKQLKAGSGSSLEQTQMQQLRQRAKALS 770
Query: 526 NLASS 512
N+A++
Sbjct: 771 NMAAT 775
>AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA,
isoform A protein.
Length = 887
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -2
Query: 727 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 548
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 799 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 858
Query: 547 NTNSILTNLASS 512
N NS+LT+ A++
Sbjct: 859 NNNSLLTSTAAT 870
>AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD,
isoform D protein.
Length = 983
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -2
Query: 727 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 548
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 895 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 954
Query: 547 NTNSILTNLASS 512
N NS+LT+ A++
Sbjct: 955 NNNSLLTSTAAT 966
>AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE,
isoform E protein.
Length = 898
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -2
Query: 727 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 548
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 810 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 869
Query: 547 NTNSILTNLASS 512
N NS+LT+ A++
Sbjct: 870 NNNSLLTSTAAT 881
>AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB,
isoform B protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -2
Query: 727 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 548
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 763 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 822
Query: 547 NTNSILTNLASS 512
N NS+LT+ A++
Sbjct: 823 NNNSLLTSTAAT 834
>AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC,
isoform C protein.
Length = 833
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -2
Query: 727 NVQLLAALETAKDVILTRLNTLLSEITDSLPDLTLMLDKLAEQLLEAINTMQQTQRNELN 548
N +LL E+ V E ++ D+ L+ D +A + I+ ++Q LN
Sbjct: 745 NGKLLVDFESTNTVPAVANGNGHIENVNNKNDINLLQDVVAPVATQLIDLSIESQDLHLN 804
Query: 547 NTNSILTNLASS 512
N NS+LT+ A++
Sbjct: 805 NNNSLLTSTAAT 816
>AE013599-2370|AAF57935.1| 394|Drosophila melanogaster CG6472-PA
protein.
Length = 394
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 199 PSKRCAPQQMFLLCRTTGRVPFF 131
P++RC P MF +CR G P F
Sbjct: 287 PAQRCEPSDMFGICREPGGGPAF 309
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,991,664
Number of Sequences: 53049
Number of extensions: 665364
Number of successful extensions: 2300
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2289
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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