Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10m16
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029690-1|ABL75747.1|  145|Drosophila melanogaster IP17407p pro...    31   1.5  
BT029644-1|ABL75703.1|  145|Drosophila melanogaster IP17207p pro...    31   1.5  
AY226547-1|AAO47373.1|  511|Drosophila melanogaster pickpocket 1...    30   3.4  
AE014297-4408|AAF56913.2|  511|Drosophila melanogaster CG18287-P...    30   3.4  
AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA...    30   3.4  
BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p pro...    30   4.5  
AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-P...    30   4.5  
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    30   4.5  
AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA...    29   5.9  

>BT029690-1|ABL75747.1|  145|Drosophila melanogaster IP17407p
           protein.
          Length = 145

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = -3

Query: 484 AFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQLANRMADI 329
           AF    +  A+++++     L+ +   L  A+T L +A++    L NR+AD+
Sbjct: 79  AFTRSFVLSASKQLVTTDQMLIKSQHSLQSAHTSLQQAQKNAQDLQNRVADV 130


>BT029644-1|ABL75703.1|  145|Drosophila melanogaster IP17207p
           protein.
          Length = 145

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = -3

Query: 484 AFASESLAEANEKIIHFANALVTANAGLVQANTMLNEARRETAQLANRMADI 329
           AF    +  A+++++     L+ +   L  A+T L +A++    L NR+AD+
Sbjct: 79  AFTRSFVLSASKQLVTTDQMLIKSQHSLQSAHTSLQQAQKNAQDLQNRVADV 130


>AY226547-1|AAO47373.1|  511|Drosophila melanogaster pickpocket 19
           protein.
          Length = 511

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +2

Query: 8   CNLTFRHARLHGIDELFSSQVLQQRDL---VVLGFVLVSRQRFFNFVKHVH 151
           CN +F H+ +HG+  +F  Q L QR L   +VLG V+      +  + H H
Sbjct: 34  CN-SFAHSNIHGMQHVFGEQHLWQRCLWLAIVLGAVITGFS-LYTVLMHRH 82


>AE014297-4408|AAF56913.2|  511|Drosophila melanogaster CG18287-PA
           protein.
          Length = 511

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +2

Query: 8   CNLTFRHARLHGIDELFSSQVLQQRDL---VVLGFVLVSRQRFFNFVKHVH 151
           CN +F H+ +HG+  +F  Q L QR L   +VLG V+      +  + H H
Sbjct: 34  CN-SFAHSNIHGMQHVFGEQHLWQRCLWLAIVLGAVITGFS-LYTVLMHRH 82


>AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA
           protein.
          Length = 275

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 621 LLFIISWITPSLVMSTVCGC 680
           + FI+ W  P L + TVCGC
Sbjct: 210 IYFILDWERPGLAIGTVCGC 229


>BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p
           protein.
          Length = 1215

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 532 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 407
           KM+ NY  I+    +  F  +S  E  E I+H  NA+V   A
Sbjct: 586 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 627


>AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-PB,
           isoform B protein.
          Length = 1170

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 532 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 407
           KM+ NY  I+    +  F  +S  E  E I+H  NA+V   A
Sbjct: 541 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 582


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
           isoform A protein.
          Length = 2190

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 532 KMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANA 407
           KM+ NY  I+    +  F  +S  E  E I+H  NA+V   A
Sbjct: 548 KMNPNYNSIDFTEVEHLFEDQSPREPGESILHIRNAMVRHEA 589


>AE014296-583|AAF47729.2| 1427|Drosophila melanogaster CG14964-PA
            protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = -3

Query: 577  VIPQVLCTGKYAPA-VKMDTNYGVIEELNKKLAFASESLAEANEKIIHFANALVTANAGL 401
            ++P         P+ +KMD   G+    ++    A+E   EANE+I   +N L   NA  
Sbjct: 1050 IVPPTATVANSNPSTLKMDLAKGIKSFFSRDKRSATEKNTEANEEI---SNPLERTNAAA 1106

Query: 400  VQANTMLNEARRETAQLANR 341
            + A+  +    +E  +L  +
Sbjct: 1107 IAADLEVKRKAKEEEELRRK 1126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,619,715
Number of Sequences: 53049
Number of extensions: 803651
Number of successful extensions: 2404
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2400
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)