Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10m13
(865 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058589-1|AAL13818.1| 484|Drosophila melanogaster LD28264p pro... 48 2e-05
AE014296-349|AAF47562.1| 484|Drosophila melanogaster CG2054-PA ... 48 2e-05
AY071559-1|AAL49181.1| 462|Drosophila melanogaster RE62779p pro... 48 2e-05
AE013599-3118|AAF46664.2| 462|Drosophila melanogaster CG3986-PA... 48 2e-05
AY051988-1|AAK93412.1| 1013|Drosophila melanogaster LD45559p pro... 43 5e-04
AE014296-558|AAF47714.2| 983|Drosophila melanogaster CG1869-PA ... 43 5e-04
AY069744-1|AAL39889.1| 257|Drosophila melanogaster LP07267p pro... 42 8e-04
AE013599-3119|AAF46665.3| 368|Drosophila melanogaster CG10531-P... 42 8e-04
AY118784-1|AAM50644.1| 268|Drosophila melanogaster GH13872p pro... 41 0.003
AE013599-3116|AAF46663.2| 476|Drosophila melanogaster CG9357-PA... 41 0.003
AY089362-1|AAL90100.1| 470|Drosophila melanogaster AT18578p pro... 38 0.013
AE013599-3117|AAM68191.1| 470|Drosophila melanogaster CG30293-P... 37 0.031
BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro... 33 0.38
AY119021-1|AAM50881.1| 688|Drosophila melanogaster LP04696p pro... 33 0.38
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P... 33 0.38
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA... 31 2.0
AJ276482-1|CAB81549.1| 769|Drosophila melanogaster putative Sec... 30 4.7
>AY058589-1|AAL13818.1| 484|Drosophila melanogaster LD28264p
protein.
Length = 484
Score = 48.0 bits (109), Expect = 2e-05
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Frame = -2
Query: 858 PXK*LWGVAMYGRGWTGVTKXYEWQLFSGTG-NGPVSGTWEDGVVDYRQIQKDLNNYV-- 688
P K + G+ YGR + + + + G G GP T EDG + Y +I + L+N
Sbjct: 273 PEKLVMGLPFYGRTFKTLASGFLNDVSEGVGFKGPY--TREDGFLGYNEICQTLSNQTSG 330
Query: 687 YTFDSAAQASYVFDKSKGDL-------ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+T + Q S V KS+ ++ +++DS S+ KV + +L G+ W +D D+
Sbjct: 331 WTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSVDTDD 390
>AE014296-349|AAF47562.1| 484|Drosophila melanogaster CG2054-PA
protein.
Length = 484
Score = 48.0 bits (109), Expect = 2e-05
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Frame = -2
Query: 858 PXK*LWGVAMYGRGWTGVTKXYEWQLFSGTG-NGPVSGTWEDGVVDYRQIQKDLNNYV-- 688
P K + G+ YGR + + + + G G GP T EDG + Y +I + L+N
Sbjct: 273 PEKLVMGLPFYGRTFKTLASGFLNDVSEGVGFKGPY--TREDGFLGYNEICQTLSNQTSG 330
Query: 687 YTFDSAAQASYVFDKSKGDL-------ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+T + Q S V KS+ ++ +++DS S+ KV + +L G+ W +D D+
Sbjct: 331 WTREWDPQTSQVLAKSERNVFTQEINVVTYDSSRSIANKVLFAMSKRLAGVMVWSVDTDD 390
>AY071559-1|AAL49181.1| 462|Drosophila melanogaster RE62779p
protein.
Length = 462
Score = 47.6 bits (108), Expect = 2e-05
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG-TWEDGVVDYRQIQKDLNNYVYTFD 676
K + G+ YG + W + G G T E+G + Y +I LNN+ FD
Sbjct: 248 KLILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEIC--LNNWQTVFD 305
Query: 675 SAAQASYVFDKSKGDL-ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
A Y F +GD I +D+ +S+ K++ V+ LGG W I+ D+
Sbjct: 306 QENGAPYAF---QGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDD 352
>AE013599-3118|AAF46664.2| 462|Drosophila melanogaster CG3986-PA
protein.
Length = 462
Score = 47.6 bits (108), Expect = 2e-05
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG-TWEDGVVDYRQIQKDLNNYVYTFD 676
K + G+ YG + W + G G T E+G + Y +I LNN+ FD
Sbjct: 248 KLILGIGFYGHSYQMSDSSQNWPGAACIGPGTAGVYTRENGFLGYHEIC--LNNWQTVFD 305
Query: 675 SAAQASYVFDKSKGDL-ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
A Y F +GD I +D+ +S+ K++ V+ LGG W I+ D+
Sbjct: 306 QENGAPYAF---QGDQWIGYDNPESIQLKMQLVESRNLGGAMMWSIETDD 352
>AY051988-1|AAK93412.1| 1013|Drosophila melanogaster LD45559p
protein.
Length = 1013
Score = 43.2 bits (97), Expect = 5e-04
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -2
Query: 840 GVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG-TWEDGVVDYRQI-QKDLNNYVYTFDSAA 667
G+ YGR +T +G G T E G + Y +I + LN VY +D
Sbjct: 366 GMPTYGRSFTLANPDKHGPNAPASGGGREGVYTKEGGFLAYYEICEMLLNGAVYVWDDEM 425
Query: 666 QASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ Y+ D + + FD ++ K+ ++ N GG W ID D+
Sbjct: 426 KVPYLVDGDQW--VGFDDERAIRNKMHWIKSNGFGGAMVWTIDMDD 469
Score = 37.5 bits (83), Expect = 0.024
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG--TWEDGVVDYRQIQKDL--NNYVY 685
K L G+ YGR + V ++ + S + G +G T E G + Y ++ L +N
Sbjct: 791 KLLIGMPTYGRSFELVNDT-QFDIGSPSSGGGKAGKFTNEAGFLSYYEVCSFLAADNTTL 849
Query: 684 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+DS Q + + ++ + FD S+ K +++ GG+ W ID D+
Sbjct: 850 VWDSEQQVPFAYRGNQW--VGFDDERSLKTKTEWLKEQGFGGIMVWSIDMDD 899
>AE014296-558|AAF47714.2| 983|Drosophila melanogaster CG1869-PA
protein.
Length = 983
Score = 43.2 bits (97), Expect = 5e-04
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = -2
Query: 840 GVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG-TWEDGVVDYRQI-QKDLNNYVYTFDSAA 667
G+ YGR +T +G G T E G + Y +I + LN VY +D
Sbjct: 366 GMPTYGRSFTLANPDKHGPNAPASGGGREGVYTKEGGFLAYYEICEMLLNGAVYVWDDEM 425
Query: 666 QASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ Y+ D + + FD ++ K+ ++ N GG W ID D+
Sbjct: 426 KVPYLVDGDQW--VGFDDERAIRNKMHWIKSNGFGGAMVWTIDMDD 469
Score = 37.5 bits (83), Expect = 0.024
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG--TWEDGVVDYRQIQKDL--NNYVY 685
K L G+ YGR + V ++ + S + G +G T E G + Y ++ L +N
Sbjct: 791 KLLIGMPTYGRSFELVNDT-QFDIGSPSSGGGKAGKFTNEAGFLSYYEVCSFLAADNTTL 849
Query: 684 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+DS Q + + ++ + FD S+ K +++ GG+ W ID D+
Sbjct: 850 VWDSEQQVPFAYRGNQW--VGFDDERSLKTKTEWLKEQGFGGIMVWSIDMDD 899
>AY069744-1|AAL39889.1| 257|Drosophila melanogaster LP07267p
protein.
Length = 257
Score = 42.3 bits (95), Expect = 8e-04
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = -2
Query: 840 GVAMYGRGWTGVTKXYEWQLFSGTGNGPV-SGTWEDGVVDYRQIQKDLNNYVYTFDSAAQ 664
GV YGR + W G G S T G + Y +I ++ + V+ +D+AA
Sbjct: 136 GVGTYGRSFQLSDSSQNWPGAPCRGEGSAGSYTGSTGYLGYNEICQNNWHTVFDYDNAAP 195
Query: 663 ASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+Y D+ +SFD+V SV K+ + L G W ++ D+
Sbjct: 196 YAYSGDQ----WVSFDNVLSVQYKMDFALSKGLAGAMIWSLETDD 236
>AE013599-3119|AAF46665.3| 368|Drosophila melanogaster CG10531-PA
protein.
Length = 368
Score = 42.3 bits (95), Expect = 8e-04
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = -2
Query: 840 GVAMYGRGWTGVTKXYEWQLFSGTGNGPV-SGTWEDGVVDYRQIQKDLNNYVYTFDSAAQ 664
GV YGR + W G G S T G + Y +I ++ + V+ +D+AA
Sbjct: 247 GVGTYGRSFQLSDSSQNWPGAPCRGEGSAGSYTGSTGYLGYNEICQNNWHTVFDYDNAAP 306
Query: 663 ASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+Y D+ +SFD+V SV K+ + L G W ++ D+
Sbjct: 307 YAYSGDQ----WVSFDNVLSVQYKMDFALSKGLAGAMIWSLETDD 347
>AY118784-1|AAM50644.1| 268|Drosophila melanogaster GH13872p
protein.
Length = 268
Score = 40.7 bits (91), Expect = 0.003
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSGTW--EDGVVDYRQIQKDLNNYVYT- 682
K + GV YGR +T T G G ++G + E GV+ Y ++ + + +T
Sbjct: 64 KLILGVPFYGRSFTLATAEGNQPGAPHIGKG-IAGNYSREPGVLGYNELCEMMEREEWTQ 122
Query: 681 -FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+++ Q Y + + + + ++ S+ K +YV N LGG+ W +++D+
Sbjct: 123 KWEATQQVPYAYRQRQW--VGYEDPRSLALKAQYVMDNHLGGIMIWSLESDD 172
>AE013599-3116|AAF46663.2| 476|Drosophila melanogaster CG9357-PA
protein.
Length = 476
Score = 40.7 bits (91), Expect = 0.003
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSGTW--EDGVVDYRQIQKDLNNYVYT- 682
K + GV YGR +T T G G ++G + E GV+ Y ++ + + +T
Sbjct: 272 KLILGVPFYGRSFTLATAEGNQPGAPHIGKG-IAGNYSREPGVLGYNELCEMMEREEWTQ 330
Query: 681 -FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+++ Q Y + + + + ++ S+ K +YV N LGG+ W +++D+
Sbjct: 331 KWEATQQVPYAYRQRQW--VGYEDPRSLALKAQYVMDNHLGGIMIWSLESDD 380
>AY089362-1|AAL90100.1| 470|Drosophila melanogaster AT18578p
protein.
Length = 470
Score = 38.3 bits (85), Expect = 0.013
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 735 GVVDYRQIQKDLNNYVYTFDSAAQASYVFDKSKGDL-ISFDSVDSVLGKVKYVDRNKLGG 559
G + Y + + + FD A+ Y ++GD +S++S S+ K+ + +KLGG
Sbjct: 290 GFMTYNEWCVQQSKWSRMFDQLAKVPYA---TRGDQWVSYESPRSIWAKMHLLQEHKLGG 346
Query: 558 LFAWEIDADN 529
AW ID D+
Sbjct: 347 AMAWTIDVDD 356
>AE013599-3117|AAM68191.1| 470|Drosophila melanogaster CG30293-PA
protein.
Length = 470
Score = 37.1 bits (82), Expect = 0.031
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = -2
Query: 735 GVVDYRQIQKDLNNYVYTFDSAAQASYVFDKSKGDL-ISFDSVDSVLGKVKYVDRNKLGG 559
G + Y + + + FD A+ Y ++GD +S+++ S+ K+ + +KLGG
Sbjct: 290 GFMTYNEWCVQQSKWSRMFDQLAKVPYA---TRGDQWVSYENPRSIWAKMHLLQEHKLGG 346
Query: 558 LFAWEIDADN 529
AW ID D+
Sbjct: 347 AMAWTIDVDD 356
>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p protein.
Length = 2286
Score = 33.5 bits (73), Expect = 0.38
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG-TWEDGVVDYRQI-QKDLNN--YVY 685
K + G+ MYG+ +T + G G T DG + Y +I +K +N+ V
Sbjct: 2145 KLVMGMPMYGQTFTLADQNRRSLNDKTVGPGKAGTFTRADGFLAYYEICEKVVNDDWKVV 2204
Query: 684 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ SY + S IS+D V ++ K +++ +LGG W +D D+
Sbjct: 2205 RDEEGIFGSYAY--SGNQWISYDDVTTIRRKSQFIKSLQLGGGMIWALDLDD 2254
Score = 33.1 bits (72), Expect = 0.51
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG--TWEDGVVDYRQIQKDLNNYVYTF 679
K + G+ +YG+ ++ + + + QL + T G +G T G + Y +I + ++ +
Sbjct: 1645 KLVMGIPLYGQSFS-LAETTKHQLNAPTYGGGEAGEATRARGFLAYYEICLKIRHHRWNV 1703
Query: 678 DSAAQASYVFDKSKGDL-ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ GD +SFD V + K +Y+ LGG W +D D+
Sbjct: 1704 VRDTKGRIGPFAYHGDQWVSFDDVPMIRHKSEYIKAMGLGGAMIWALDLDD 1754
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 627 ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+S+DS D V K V KLGG W +D D+
Sbjct: 1279 VSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDD 1311
>AY119021-1|AAM50881.1| 688|Drosophila melanogaster LP04696p
protein.
Length = 688
Score = 33.5 bits (73), Expect = 0.38
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG-TWEDGVVDYRQI-QKDLNN--YVY 685
K + G+ MYG+ +T + G G T DG + Y +I +K +N+ V
Sbjct: 547 KLVMGMPMYGQTFTLADQNRRSLNDKTVGPGKAGTFTRADGFLAYYEICEKVVNDDWKVV 606
Query: 684 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ SY + S IS+D V ++ K +++ +LGG W +D D+
Sbjct: 607 RDEEGIFGSYAY--SGNQWISYDDVTTIRRKSQFIKSLQLGGGMIWALDLDD 656
Score = 33.1 bits (72), Expect = 0.51
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG--TWEDGVVDYRQIQKDLNNYVYTF 679
K + G+ +YG+ ++ + + + QL + T G +G T G + Y +I + ++ +
Sbjct: 47 KLVMGIPLYGQSFS-LAETTKHQLNAPTYGGGEAGEATRARGFLAYYEICLKIRHHRWNV 105
Query: 678 DSAAQASYVFDKSKGDL-ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ GD +SFD V + K +Y+ LGG W +D D+
Sbjct: 106 VRDTKGRIGPFAYHGDQWVSFDDVPMIRHKSEYIKAMGLGGAMIWALDLDD 156
>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
protein.
Length = 2286
Score = 33.5 bits (73), Expect = 0.38
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG-TWEDGVVDYRQI-QKDLNN--YVY 685
K + G+ MYG+ +T + G G T DG + Y +I +K +N+ V
Sbjct: 2145 KLVMGMPMYGQTFTLADQNRRSLNDKTVGPGKAGTFTRADGFLAYYEICEKVVNDDWKVV 2204
Query: 684 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ SY + S IS+D V ++ K +++ +LGG W +D D+
Sbjct: 2205 RDEEGIFGSYAY--SGNQWISYDDVTTIRRKSQFIKSLQLGGGMIWALDLDD 2254
Score = 33.1 bits (72), Expect = 0.51
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = -2
Query: 852 K*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSG--TWEDGVVDYRQIQKDLNNYVYTF 679
K + G+ +YG+ ++ + + + QL + T G +G T G + Y +I + ++ +
Sbjct: 1645 KLVMGIPLYGQSFS-LAETTKHQLNAPTYGGGEAGEATRARGFLAYYEICLKIRHHRWNV 1703
Query: 678 DSAAQASYVFDKSKGDL-ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ GD +SFD V + K +Y+ LGG W +D D+
Sbjct: 1704 VRDTKGRIGPFAYHGDQWVSFDDVPMIRHKSEYIKAMGLGGAMIWALDLDD 1754
Score = 29.1 bits (62), Expect = 8.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 627 ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+S+DS D V K V KLGG W +D D+
Sbjct: 1279 VSYDSPDMVRKKSLLVRSLKLGGGMVWALDLDD 1311
>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
protein.
Length = 4498
Score = 31.1 bits (67), Expect = 2.0
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = -2
Query: 840 GVAMYGRGWTGVTKXYEWQLFSGTGNGPVS-GTWEDGVVDYRQIQKDLNN----YVYTFD 676
G+ YGR +T + + G G T E G + Y +I + L + V +
Sbjct: 300 GIPTYGRSYTLINEESTELGAPAEGPGEQGDATREKGYLAYYEICQTLKDDPEWTVVQPN 359
Query: 675 SAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+ Y + +++ + +D V K +YV LGG+ W ID D+
Sbjct: 360 ANVMGPYAYRRNQW--VGYDDEAIVRKKAEYVVAQGLGGIMFWAIDNDD 406
>AJ276482-1|CAB81549.1| 769|Drosophila melanogaster putative Sec23
protein protein.
Length = 769
Score = 29.9 bits (64), Expect = 4.7
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = -3
Query: 428 TKRARAKRIRLPLEIIDTILQY---LDPISHAKVVGLTTRVKCRLLRDNNVE-DY-LKLT 264
+ R A R+ +PL + L+ L PI + V L TR CR + + + DY KL
Sbjct: 26 SSRIEASRLVVPLACLYQPLKERPDLPPIQYEPV--LCTRSNCRAILNPLCQVDYRAKLW 83
Query: 263 PANYHFTTDQFICNYLGITDHPMTPYLVP 177
N+ F +QF Y I++ L+P
Sbjct: 84 VCNFCFQRNQFPPQYAAISEQHQPAELIP 112
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,406,842
Number of Sequences: 53049
Number of extensions: 857719
Number of successful extensions: 2698
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2698
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4168047156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -