Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10m13
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 51 9e-07
Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical pr... 51 1e-06
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 44 2e-04
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 43 3e-04
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 35 0.065
AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical ... 34 0.15
AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 31 1.4
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC006611-1|AAK85455.2| 348|Caenorhabditis elegans Vacuolar h at... 29 3.2
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 29 4.3
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 29 4.3
AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical ... 29 4.3
AF039051-6|AAB94266.2| 448|Caenorhabditis elegans Hypothetical ... 29 5.7
Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical pr... 28 9.9
Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical pr... 28 9.9
AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical ... 28 9.9
AF039051-4|AAB94264.1| 539|Caenorhabditis elegans Hypothetical ... 28 9.9
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Frame = -2
Query: 840 GVAMYGRGWTGVTKXYE-----WQLFSGTGNGPVSGT-WEDGVVDYRQIQKDLNNYVYTF 679
GV YGR W V + W+ + T + GT +E G V +R + + + F
Sbjct: 271 GVPFYGRFWKNVGDAVDSTDDMWRTATATNS---EGTKFEGGDVQWRDLHEKFDTTKTKF 327
Query: 678 DSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLLNAMN 505
S ++ +++ + + +++ +S+ KV Y+ N +GG+ W ID D+ G LLN+
Sbjct: 328 HSGSKTPFIWLSEQKTFVGYENAESLKHKVDYIVENNIGGVMIWAIDFDDDQGTLLNSAA 387
Query: 504 AQ 499
A+
Sbjct: 388 AE 389
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Frame = -2
Query: 858 PXK*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSGTWEDGVVDYRQIQKD-LNNYVYT 682
P + GV YGR W V + + P +G +E G V +R ++K+ N T
Sbjct: 1197 PSQLTMGVPFYGRYWKNVLEPIDASDNMWRTAAPQNGKYEGGYVGWRNLEKEGWNKGSAT 1256
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLLNAM 508
+ + Y+ + + F++ S+ K+ Y LGGL W +D D+ LLN +
Sbjct: 1257 WHKKTKTPYIMNNGARMFLGFENERSLKEKMDYATNRNLGGLMIWALDLDDDADTLLNLV 1316
Query: 507 NA 502
++
Sbjct: 1317 SS 1318
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 51.2 bits (117), Expect = 9e-07
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 3/116 (2%)
Frame = -2
Query: 840 GVAMYGRGWTGVTKXYEWQLFSGTGNGPVSGTWEDGVVDYRQIQKD-LNNYVYTFDSAAQ 664
GV YGR W V + P +G +E G V +R + K+ N ++ +
Sbjct: 1740 GVPFYGRYWKNVLGPIDKSDNMWRTAAPQNGKYEGGYVGWRNLAKEGWNKGSASWHEKTK 1799
Query: 663 ASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLLNAMNA 502
Y+ + + F++ S+ K+KY LGGL W +D D+ LLN +++
Sbjct: 1800 TPYIMNNGAKKFLGFENERSLKEKMKYATDRNLGGLMIWALDLDDDADTLLNLVSS 1855
>Z81062-8|CAD59145.1| 808|Caenorhabditis elegans Hypothetical
protein F15A4.8b protein.
Length = 808
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLLNAM 508
+D+ + S+++DK+K ++ +S S+ K KYV KLGG++ W +D D+ G LLNA
Sbjct: 343 WDTETKTSFLWDKNKNTFVTLESDRSIREKKKYVCDMKLGGVWIWTVDMDDSAGSLLNAS 402
Query: 507 NAQ 499
+A+
Sbjct: 403 SAR 405
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAM 508
+D + SY+++ +L++F++ S+ K KY+ R +GG+ W +D D+G LL A+
Sbjct: 742 WDETTKTSYIWNPETKELLTFETDRSINEKTKYIKRVNIGGVCLWAVDMDDGTLLEAV 799
>Z81062-7|CAB02942.1| 755|Caenorhabditis elegans Hypothetical
protein F15A4.8a protein.
Length = 755
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLLNAM 508
+D+ + S+++DK+K ++ +S S+ K KYV KLGG++ W +D D+ G LLNA
Sbjct: 320 WDTETKTSFLWDKNKNTFVTLESDRSIREKKKYVCDMKLGGVWIWTVDMDDSAGSLLNAS 379
Query: 507 NAQ 499
+A+
Sbjct: 380 SAR 382
Score = 48.8 bits (111), Expect = 5e-06
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAM 508
+D + SY+++ +L++F++ S+ K KY+ R +GG+ W +D D+G LL A+
Sbjct: 689 WDETTKTSYIWNPETKELLTFETDRSINEKTKYIKRVNIGGVCLWAVDMDDGTLLEAV 746
>Z54342-3|CAA91154.1| 394|Caenorhabditis elegans Hypothetical
protein C08H9.6 protein.
Length = 394
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Frame = -2
Query: 729 VDYRQIQKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFA 550
+ +R+ KD N + + ++++SY +D ++F++ S+ KV YV +GGL
Sbjct: 290 IGWRKFIKDRRNTIPQWHDSSKSSYAWDPKSKIFLAFENEKSLSEKVIYVRNKNIGGLVI 349
Query: 549 WEIDADNGD--LLNAMNA 502
W +D D+ D LLNA+ +
Sbjct: 350 WNVDQDDNDNSLLNALTS 367
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/72 (29%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Frame = -2
Query: 711 QKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDAD 532
QK + + Y++D+A ++SY++ + ++F++ S+ K++YV+ LGG++ W +D D
Sbjct: 345 QKGIELFPYSWDNATKSSYIWKPKEKTFLTFENERSIEKKLQYVNEMNLGGVWIWSVDMD 404
Query: 531 N--GDLLNAMNA 502
+ LL+A+++
Sbjct: 405 DRINTLLDAVSS 416
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 48.0 bits (109), Expect = 9e-06
Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = -2
Query: 687 YTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN--GDLLN 514
Y+FD+A + +++++ S ++F++ S++ K++YV + LGG+ W +D D+ LN
Sbjct: 350 YSFDNATRNAFIYNSSTKIYLTFETDQSIVAKIEYVSEHLLGGICIWTVDKDDEGNSQLN 409
Query: 513 AMN 505
A++
Sbjct: 410 AIS 412
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 46.4 bits (105), Expect = 3e-05
Identities = 16/62 (25%), Positives = 37/62 (59%)
Frame = -2
Query: 714 IQKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDA 535
+QK N Y +D ++ +++++ + + ++F+ S+ K+ YV LGG++ W++D
Sbjct: 360 LQKGYNLSSYNYDDLSETAFIYNSTTKEYLTFEVKRSIAAKLDYVQNMNLGGVWIWQMDM 419
Query: 534 DN 529
D+
Sbjct: 420 DD 421
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = -2
Query: 840 GVAMYGRGWTGVTKXYEWQLFSGTGNGPVSGTW---EDGVVDYRQIQKDLNNYVYTF-DS 673
G+ YGRGWT + GT P T E GV Y + + L N + DS
Sbjct: 298 GMPTYGRGWTLNNAS---AINPGTSGSPAKITQYVQEAGVGAYFEFCEMLANGATRYWDS 354
Query: 672 AAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
+Q Y+ ++ S+D +S K+ YV R GG F W +D D+
Sbjct: 355 QSQVPYLVQGNQW--WSYDDEESFANKMAYVKREGYGGAFVWTLDFDD 400
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = -2
Query: 723 YRQIQKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWE 544
Y +D+ ++D+A Q YV D ++++ S+ K+ YV++ LGG++ W
Sbjct: 344 YTVEHEDMELSPESWDNATQTPYVLDLKTRTFFTYENEKSIKVKLDYVNKMDLGGVWIWS 403
Query: 543 IDADNGDLLNAM 508
+D D D LN +
Sbjct: 404 VDMD--DRLNTL 413
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/58 (31%), Positives = 36/58 (62%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAM 508
+D ++SY ++ + ++F++ S+ K+KYV LGG++ W +DA N LL+++
Sbjct: 330 WDEETRSSYTWNPDTRNFVTFETDKSIQEKMKYVKEKNLGGVWIWHVDA-NEKLLDSV 386
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 41.1 bits (92), Expect = 0.001
Identities = 15/52 (28%), Positives = 33/52 (63%)
Frame = -2
Query: 684 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
TF+S +A++ ++ + ++F++ D++ K+ YV LGG++ W +D D+
Sbjct: 293 TFNSEIRAAFKYNATTETFLTFETNDTIAAKIDYVKDRILGGVWIWGVDMDD 344
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 40.3 bits (90), Expect = 0.002
Identities = 14/52 (26%), Positives = 32/52 (61%)
Frame = -2
Query: 684 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADN 529
++D+ + S +++ S ++F++ S+ K++YV LGG++ W +D D+
Sbjct: 326 SWDTLTETSSMYNNSTKTFLAFETEKSIHAKIEYVMNKNLGGVWIWSVDMDD 377
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = -2
Query: 753 SGTWEDGVVDYRQIQKDL---NNYVY---TFDSAAQASYVFDKSKGDLISFDSVDSVLGK 592
+ T++ GVV + + L Y + T++ +A++ ++ + ++F++ D++ K
Sbjct: 341 NATFQGGVVGETSMSRKLVQEEGYDFSNPTYNPEIRAAFKYNATTETFLTFETNDTIAAK 400
Query: 591 VKYVDRNKLGGLFAWEIDADNGDLLNAMN 505
+ YV LGG++ W +D D+ D N +N
Sbjct: 401 IDYVKDRILGGVWIWAVDMDD-DSNNLLN 428
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/89 (24%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = -2
Query: 753 SGTWEDGVVDYRQIQKDL---NNYVY---TFDSAAQASYVFDKSKGDLISFDSVDSVLGK 592
+ T++ GVV + + L Y + T++ +A++ ++ + ++F++ D++ K
Sbjct: 339 NATFQGGVVGETSMSRKLVQEEGYDFSNPTYNPEIRAAFKYNATTETFLTFETNDTIAAK 398
Query: 591 VKYVDRNKLGGLFAWEIDADNGDLLNAMN 505
+ YV LGG++ W +D D+ D N +N
Sbjct: 399 IDYVKDRILGGVWIWAVDMDD-DSNNLLN 426
>Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical
protein R09D1.5 protein.
Length = 429
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDAD--NGDLLNAM 508
+D + YV+++ G+ ++F++ S+ K+ Y + LGG++ +D D N +LL A+
Sbjct: 352 WDDVTKTPYVWNQETGNFLTFENKKSIEAKLAYAIEHNLGGVWIHLVDKDNENEELLRAV 411
Query: 507 NAQFKLRDEL*KQVSFVC 454
++ E +V++ C
Sbjct: 412 ASKKFCASESENKVTYDC 429
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 37.1 bits (82), Expect = 0.016
Identities = 25/122 (20%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = -2
Query: 858 PXK*LWGVAMYGRGWTGVTKXYEWQLFSGTGNGPVSGTWEDGVVDYRQIQ-KDLNNYVYT 682
P K ++ YGR W V ++F ++G + V ++ + + +
Sbjct: 323 PSKLNMALSFYGRYWENVNDNVPDEMFKEADL--INGKAQGMFVAWKNLAGRGWDKSEAL 380
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDAD--NGDLLNAM 508
+ Q Y+++ + F++ S+ K+ Y + +GG++ W + AD N LLN +
Sbjct: 381 WHEETQIPYIWNSEERKFFVFENERSLQAKMDYAADHNIGGVYIWALGADDNNDTLLNVV 440
Query: 507 NA 502
++
Sbjct: 441 SS 442
>Z78412-8|CAB01653.1| 400|Caenorhabditis elegans Hypothetical
protein M176.8 protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.028
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -2
Query: 684 TFDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAM 508
++D+ Y+ D ++F+ S+ K Y + LGG++ W +D D D LN++
Sbjct: 322 SWDNLTMTPYILDLKAKTFLTFEDKRSIKIKTDYAKKMDLGGVWLWSVDMD--DRLNSL 378
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 36.3 bits (80), Expect = 0.028
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = -2
Query: 837 VAMYGRGWTGVTKXYEWQLFSGTGNGPVSGTWEDGVVDYRQIQKDLNNYVYTFDSAAQAS 658
+ Y R W V + + + N + DGV + D + ++D+
Sbjct: 314 IPFYARYWNNVQEAVDPRT-EVFRNAEIRNNRADGVPYMDRSSADYK--MASWDNLTSTP 370
Query: 657 YVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEID-ADNGD-LLNAMNAQ 499
Y++ + +F++ S+ K +Y LGG++ W +D D+G+ LL+A+ +Q
Sbjct: 371 YIWKPDERRFFTFENQKSIAIKTRYAIDMNLGGVWIWSVDMGDHGNVLLSAVASQ 425
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 35.1 bits (77), Expect = 0.065
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 523
F + + SY++ ++ + S+ K +YV + +GG+ W ID D+GD
Sbjct: 379 FHNLTKTSYMWIPGSSLFLTLEDEQSLRVKNRYVADHNIGGITMWTIDQDDGD 431
>AF024500-2|AAB70360.1| 467|Caenorhabditis elegans Hypothetical
protein K06H6.4 protein.
Length = 467
Score = 33.9 bits (74), Expect = 0.15
Identities = 32/108 (29%), Positives = 51/108 (47%)
Frame = -3
Query: 410 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVEDYLKLTPANYHFTTDQF 231
+R+ + E T++ YLD I +A + L RVK +++DNN TP Y D+
Sbjct: 276 ERLEIRNEQFKTVVDYLDSIHNASIANLRFRVKW-VIKDNN-------TPERYE--NDKQ 325
Query: 230 ICNYLGITDHPMTPYLVPLLSFGKASCAFFNKCIPEDVRIVTLNRPLT 87
I + + + T L F + C PE+V I+T++ PLT
Sbjct: 326 ITDEMLFHKYQNTSQLGNF--FDQPKCII----RPENVAIMTIHGPLT 367
>AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical
protein H04J21.1 protein.
Length = 1032
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -2
Query: 765 NGPVSGTWEDGVVDYRQIQKDLNNYVYTFDSAAQASYVFDKSKGDLISFDSVDSVLGKV 589
N V G W + + + I DL+N + DS + DK+ +++ F S+ S LGK+
Sbjct: 432 NDAVDGQWNN-IANALTILNDLDNALKAVDSFL--GFRSDKASTEIVQFQSLSSKLGKL 487
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 627 ISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 523
++ + S+ K +YV + +GG+ W ID D+GD
Sbjct: 400 MTLEDEKSLREKNRYVADHNIGGITMWTIDQDDGD 434
>Z54342-6|CAA91148.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.11 protein.
Length = 459
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -2
Query: 711 QKDLNNYVYTFDSAAQASYVFDKSKGD-LISFDSVDSVLGKVKYVDRNKLGGLFAWEIDA 535
Q++ N F + + SY++ ++ + S+ K +YV + +GG+ W ID
Sbjct: 370 QRNWNLTDIKFHNLTKTSYIWIPGPPTWFLTLEDEKSLREKNRYVADHNIGGITMWTIDQ 429
Query: 534 DNGD 523
D+ D
Sbjct: 430 DDDD 433
>Z54342-4|CAA91150.1| 447|Caenorhabditis elegans Hypothetical
protein C08H9.7 protein.
Length = 447
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 714 IQKDLNNYVYTFDSAAQASYVFDKSKGD-LISFDSVDSVLGKVKYVDRNKLGGLFAWEID 538
+Q+ N F + + SY++ ++ + S+ K KYV +GG+ W ID
Sbjct: 357 LQQKWNLEDIKFHNLTKTSYIWIPGPPTWFMTLEDKRSLREKTKYVADYNIGGITMWTID 416
Query: 537 ADNGD 523
D+ D
Sbjct: 417 QDDDD 421
>AC006611-1|AAK85455.2| 348|Caenorhabditis elegans Vacuolar h
atpase protein 16 protein.
Length = 348
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = -2
Query: 783 LFSGTGNGPVSGTWEDGVVDYRQIQKDLNNYVYTF 679
LF G+GNGP T ED ++ +++ ++++Y++ F
Sbjct: 274 LFEGSGNGPGEKTLEDKFFEH-EVKLNVHSYLHQF 307
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGD-LISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 523
F + + SY++ ++ + S+ K +YV + +GG+ W ID D+ D
Sbjct: 386 FHNLTKTSYIWIPGPPTRFLTLEDEQSLREKNRYVADHNIGGITMWTIDQDDDD 439
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +2
Query: 728 TTPSSHVPDTGPLPVPENSCHSXNFV-TPVQPRPYMATPH 844
TTP H P V + N V PVQP+PY+A H
Sbjct: 324 TTPIPHRPFVPETFVEQVEAGQANLVPAPVQPQPYVAPAH 363
>AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical
protein T08E11.8 protein.
Length = 534
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -2
Query: 654 VFDKSKGDLISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGDLLNAMNAQFKLRDEL* 475
V DK+ D+ D + ++L + K+V+ K+ ++ + D D D +N + QFK+ +
Sbjct: 65 VKDKNYIDMACED-LFNILSEAKFVEDLKIRIIYGFG-DVDEVDTVNRVCEQFKIHSQTT 122
Query: 474 KQVSFVCSCY 445
K +V S Y
Sbjct: 123 KSPIYVHSLY 132
>AF039051-6|AAB94266.2| 448|Caenorhabditis elegans Hypothetical
protein C14C6.8 protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 410 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVEDY 276
+R+ + E T++ YLD I +A V L RVK + +N Y
Sbjct: 257 ERLEIRNEQFKTVVDYLDSIHNASVANLHFRVKWVMKHNNTPARY 301
>Z71259-1|CAA95789.1| 360|Caenorhabditis elegans Hypothetical
protein F13G3.1 protein.
Length = 360
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +3
Query: 615 CQTKSNRLYFYRKRTTLERRCQTCTHNC*DLFEFDDNLQHRPPTCPTPARC 767
C + S+R KRT RCQ C+ + + ++ H T P RC
Sbjct: 163 CSSDSDRCIISEKRTVFY-RCQLCSFEDERVSVLNSHVSHLHNTSPCVCRC 212
>Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical
protein C08H9.12 protein.
Length = 460
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -2
Query: 681 FDSAAQASYVFDKSKGD-LISFDSVDSVLGKVKYVDRNKLGGLFAWEIDADNGD 523
F + + SY++ ++ + S+ K +YV + +GG+ W ID D+ D
Sbjct: 381 FHNLTKTSYIWIPGPPTRFMTLEEERSLREKNRYVADHNIGGITMWTIDQDDDD 434
>AL021474-2|CAA16309.3| 655|Caenorhabditis elegans Hypothetical
protein Y32F6A.3 protein.
Length = 655
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 479 SSSLSLNCAFIALSKSPLSASISQANKPPNLFRSTYLT 592
+SS+ +A K+PLSAS+S N+P + T L+
Sbjct: 532 TSSVPTTPTGLAAPKTPLSASVSATNEPDSTTNGTPLS 569
>AF039051-4|AAB94264.1| 539|Caenorhabditis elegans Hypothetical
protein C14C6.6 protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 410 KRIRLPLEIIDTILQYLDPISHAKVVGLTTRVKCRLLRDNNVEDY 276
+RI + E T+ YLD I ++ + L RVK L +N Y
Sbjct: 328 ERIEIRSENFKTVTSYLDSIHNSSISNLHFRVKWVLKHNNTPATY 372
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,448,725
Number of Sequences: 27780
Number of extensions: 451010
Number of successful extensions: 1458
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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