Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10l23
(420 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.46
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.46
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.46
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 1.1
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 23 1.8
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 23 1.8
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 23 1.8
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 23 1.8
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 22 3.2
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 21 4.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 21 4.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 4.3
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 21 4.3
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 4.3
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 5.6
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 7.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 20 9.9
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 20 9.9
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 20 9.9
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 20 9.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 20 9.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 9.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 9.9
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.46
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 226 HVPLFERVRNKQYI 267
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.46
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 226 HVPLFERVRNKQYI 267
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.46
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +1
Query: 226 HVPLFERVRNKQYI 267
HVP+F+R N++YI
Sbjct: 365 HVPIFDRYINREYI 378
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 1.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 156 NRHCNTSHLQLHCNFSNMY 212
N++CN L + NF+N Y
Sbjct: 92 NKNCNAGSLTVKKNFANKY 110
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 22.6 bits (46), Expect = 1.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +3
Query: 174 SHLQLHCNFSNMYYKCISRPA 236
SH +L C+ + +Y C+ A
Sbjct: 83 SHTRLSCDCDDKFYDCLKNSA 103
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.6 bits (46), Expect = 1.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +3
Query: 174 SHLQLHCNFSNMYYKCISRPA 236
SH +L C+ + +Y C+ A
Sbjct: 88 SHTRLSCDCDDKFYDCLKNSA 108
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.6 bits (46), Expect = 1.8
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -1
Query: 141 VLDRNQLQNTDMEVLESLEYTSDNVELLCKKVCVIVDNYNQVLP 10
V D + M + +E+T + E + VCV+ + NQ P
Sbjct: 576 VCDNQTYTSLQMAMKNPIEFTDLSNERKYEDVCVLKTDTNQSCP 619
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 22.6 bits (46), Expect = 1.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +3
Query: 174 SHLQLHCNFSNMYYKCISRPA 236
SH +L C+ + +Y C+ A
Sbjct: 88 SHTRLSCDCDDKFYDCLKNSA 108
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 21.8 bits (44), Expect = 3.2
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 187 YTVIFQICIINVFHVPLFERVRN-KQYI 267
+T + +ICI + L E +RN +YI
Sbjct: 323 FTTVHRICIGETMPMELIENLRNHPEYI 350
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.4 bits (43), Expect = 4.3
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 327 GLFFAQPGILCVTPHSSHSI 386
GL G++CV S HSI
Sbjct: 67 GLKLLSDGLMCVEKDSIHSI 86
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.4 bits (43), Expect = 4.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 252 PNALKKRDVKYIYNTYLKNYSVIEGAMCCNGDCLAV 145
P A + K +Y+ L NY+ + + N D L V
Sbjct: 13 PGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTV 48
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 4.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 174 SHLQLHCNFSNMYY 215
S L CN+SN YY
Sbjct: 305 SSLSNSCNYSNNYY 318
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 21.4 bits (43), Expect = 4.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 314 LYRPRFIFCATRHFVRH 364
+YRP + T+ F+RH
Sbjct: 6 VYRPTIVKKRTKKFIRH 22
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 4.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 152 KQSPLQHIAPSITL 193
+QSP QH+ P TL
Sbjct: 1007 QQSPQQHVLPGKTL 1020
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.0 bits (42), Expect = 5.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 231 DVKYIYNTYLKNYSVIEGAMCCNGDCLAVVVLDRNQLQNTDMEVLESLEYTS 76
D K +Y+ L NY+ + + N D + VV L Q D+ + + + T+
Sbjct: 20 DAKRLYDDLLSNYNRLIRPVSNNNDTV-VVKLGLRLSQLIDLNLKDQILTTN 70
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 20.6 bits (41), Expect = 7.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 131 RSNTTTAKQSPLQHIAPSITL*FFKYVL 214
RSN T+ QS IA + F YVL
Sbjct: 258 RSNANTSSQSAEIRIAKAAITICFLYVL 285
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 119 IPVPIYCGNFPPRPMGP 135
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 119 IPVPIYCGNFPPRPMGP 135
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 119 IPVPIYCGNFPPRPMGP 135
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPIYCGNFPPRPMGP 137
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 121 IPVPVYCGNFPPRPMGP 137
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 354 IPVPVYCGNFPPRPMGP 370
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 9.9
Identities = 6/17 (35%), Positives = 9/17 (52%)
Frame = +3
Query: 102 LPCPCFAADFGPTPQRP 152
+P P + +F P P P
Sbjct: 354 IPVPVYCGNFPPRPMGP 370
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,552
Number of Sequences: 438
Number of extensions: 3155
Number of successful extensions: 31
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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