Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10l18
(197 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 24 0.20
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 0.80
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 19 4.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 19 4.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 19 4.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 19 4.3
DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 19 5.7
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 19 5.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 19 5.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 5.7
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 19 5.7
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 19 7.5
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 19 7.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 19 7.5
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 19 7.5
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 19 7.5
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 19 7.5
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 18 9.9
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 18 9.9
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 18 9.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 18 9.9
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 18 9.9
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 18 9.9
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.8 bits (49), Expect = 0.20
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 110 YGQKIIERSIKNYGTFWPSRGAE 42
Y +++ +KN TFW +RG +
Sbjct: 196 YRSAALDQEMKNVLTFWMNRGVD 218
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 0.80
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 197 EKATHILSNIEHHEADYPAVCRGRVCH-TRYGQKIIERSIKNY 72
+KA + + HHE DY + RG + Q II I NY
Sbjct: 756 KKARSVNHLLTHHEYDY-ELSRGYIDEKILENQNIITHMILNY 797
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 19.4 bits (38), Expect = 4.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 55 PEGLKHKIRRP 23
P LKHKIR P
Sbjct: 456 PYTLKHKIRVP 466
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.4 bits (38), Expect = 4.3
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +2
Query: 101 SAHSECDKRGHDKQQDNQLHG 163
S E + RGH Q + HG
Sbjct: 387 SDSGENNSRGHSGQSSSHHHG 407
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 19.4 bits (38), Expect = 4.3
Identities = 5/12 (41%), Positives = 9/12 (75%)
Frame = +2
Query: 50 LGMAKMCRSF*W 85
+G+A C++F W
Sbjct: 286 MGVASFCKAFPW 297
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 19.4 bits (38), Expect = 4.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 19 CKVFESCVSAPRDG 60
CKV S VSA +G
Sbjct: 595 CKVIASSVSAGEEG 608
>DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein.
Length = 152
Score = 19.0 bits (37), Expect = 5.7
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 147 IISFMVFYIRQYM 185
+I ++ F+I QYM
Sbjct: 121 VIDYVKFHITQYM 133
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 19.0 bits (37), Expect = 5.7
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 135 SWPRLSHSLWAENH 94
+W + +SLW EN+
Sbjct: 417 AWGFVGNSLWWENN 430
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.0 bits (37), Expect = 5.7
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 197 EKATHILSNIEHH 159
EKA H + I+HH
Sbjct: 452 EKALHNVMFIQHH 464
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.0 bits (37), Expect = 5.7
Identities = 7/22 (31%), Positives = 8/22 (36%)
Frame = -1
Query: 161 HEADYPAVCRGRVCHTRYGQKI 96
H DY V RY K+
Sbjct: 683 HSGDYTCVAANPAAEVRYTAKL 704
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 19.0 bits (37), Expect = 5.7
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +3
Query: 78 FNGSLNDFLPIASVTNAATTNSRIIS 155
F G +N F + +T T+N+ +I+
Sbjct: 479 FIGIVNQFHILQFITKNGTSNNYLIN 504
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 18.6 bits (36), Expect = 7.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 100 KSLRDPLKTTAHFGHPEGLKHKI 32
K L P + G PEG+++K+
Sbjct: 598 KMLGFPERLILPRGKPEGMRYKM 620
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 18.6 bits (36), Expect = 7.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 100 KSLRDPLKTTAHFGHPEGLKHKI 32
K L P + G PEG+++K+
Sbjct: 598 KMLGFPERLILPRGKPEGMRYKM 620
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 18.6 bits (36), Expect = 7.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -3
Query: 90 EIH*KLRHILAIPRG*NTRFEDL 22
EIH + +P+G TR E L
Sbjct: 289 EIHLAYNGLRDLPKGIFTRLEQL 311
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 18.6 bits (36), Expect = 7.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 69 AVVFNGSLNDFLPIASVTNAATTN 140
AVVF SL+ + + TTN
Sbjct: 32 AVVFGLSLHHIIDVDEKNQILTTN 55
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 18.6 bits (36), Expect = 7.5
Identities = 5/23 (21%), Positives = 12/23 (52%)
Frame = +1
Query: 1 ICLRVCCKVFESCVSAPRDGQNV 69
+CL + C+ S + + +N+
Sbjct: 9 VCLSIACQDVTSAIHQRKSSKNL 31
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 18.6 bits (36), Expect = 7.5
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +3
Query: 60 PKCAVVFNGSLNDFLPIASVTNAATTNSRIISFMVFYI 173
P + F L +LP S + +S ++S VF++
Sbjct: 259 PCVGITFLTVLVFYLPSDSGEKVSLCSSILLSLTVFFL 296
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 67 VP*FLMDLSMIFCP 108
+P FLM + + FCP
Sbjct: 341 LPFFLMYVIVPFCP 354
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 67 VP*FLMDLSMIFCP 108
+P FLM + + FCP
Sbjct: 341 LPFFLMYVIVPFCP 354
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 18.2 bits (35), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 60 PKCAVVFNGSLNDFLPIASVTNAATTNSRIISFMVFYI 173
P + F L +LP S + S +IS VF++
Sbjct: 254 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFL 291
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 18.2 bits (35), Expect = 9.9
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 60 PKCAVVFNGSLNDFLPIASVTNAATTNSRIISFMVFYI 173
P + F L +LP S + S +IS VF++
Sbjct: 254 PCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFL 291
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 18.2 bits (35), Expect = 9.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 67 VP*FLMDLSMIFCP 108
+P FLM + + FCP
Sbjct: 341 LPFFLMYVIVPFCP 354
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 18.2 bits (35), Expect = 9.9
Identities = 6/23 (26%), Positives = 10/23 (43%)
Frame = -1
Query: 110 YGQKIIERSIKNYGTFWPSRGAE 42
Y + +KN FW +G +
Sbjct: 203 YRNSDVREEMKNIMKFWLDKGID 225
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,444
Number of Sequences: 438
Number of extensions: 1022
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used: 2668491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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