Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10l08
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22178-4|CAA80156.1| 359|Caenorhabditis elegans Hypothetical pr... 115 5e-26
Z68319-5|CAA92703.1| 261|Caenorhabditis elegans Hypothetical pr... 113 1e-25
Z75525-7|CAH10769.1| 573|Caenorhabditis elegans Hypothetical pr... 87 2e-17
Z75525-6|CAA99765.2| 623|Caenorhabditis elegans Hypothetical pr... 87 2e-17
AF003925-1|AAB61344.1| 573|Caenorhabditis elegans mRNA capping ... 87 2e-17
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 41 0.001
AC026301-12|AAK68892.1| 227|Caenorhabditis elegans Hypothetical... 40 0.003
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 39 0.004
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 39 0.004
U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division c... 39 0.004
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 39 0.004
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 39 0.004
AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14 phosph... 39 0.004
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 39 0.004
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 39 0.004
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 39 0.004
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 39 0.004
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 39 0.004
AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protei... 34 0.11
AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN phosphat... 34 0.11
AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein. 34 0.11
AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dau... 34 0.11
U41534-8|AAD31049.1| 221|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z82096-1|CAB05030.2| 229|Caenorhabditis elegans Hypothetical pr... 31 1.4
U41007-16|AAA82276.1| 288|Caenorhabditis elegans Hypothetical p... 30 1.9
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 30 2.5
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 30 2.5
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 30 2.5
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 30 2.5
AL022716-3|CAA18771.1| 272|Caenorhabditis elegans Hypothetical ... 30 2.5
U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical pr... 29 5.7
U40939-1|AAA81700.1| 186|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 28 7.5
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 28 7.5
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 28 7.5
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 28 7.5
AF100659-7|AAC68967.1| 688|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 28 7.5
Z81486-6|CAB03988.2| 309|Caenorhabditis elegans Hypothetical pr... 28 9.9
>Z22178-4|CAA80156.1| 359|Caenorhabditis elegans Hypothetical
protein F54C8.4 protein.
Length = 359
Score = 115 bits (276), Expect = 5e-26
Identities = 54/147 (36%), Positives = 91/147 (61%), Gaps = 6/147 (4%)
Frame = -1
Query: 770 VLKTPLQPELFAYVTSEEDVWTTE---QIVKQNPSIGAIIDLTNTSKYYDGVHFLRAGLL 600
V KTP+ +L + E+ T + Q+ ++ +G ++DL++T +YYD +
Sbjct: 29 VFKTPINSQLSTKIHKEQRFTTNDLFRQLSERGQYLGLVVDLSDTDRYYDKKDITGMCVQ 88
Query: 599 YKKIQVPGQT-LPSESIVQEFIDTVEEFTEKC--PGMLVGVHCTHGINRTGYMVCRYLMH 429
Y+K+ PG+ + + V+ F ++++T+KC P L+GVHCT+GINR GY++CR+L+
Sbjct: 89 YEKVNCPGRGFIERDDCVESFHQVIQDYTDKCDDPDALIGVHCTNGINRCGYLICRFLID 148
Query: 428 TLGIAPQEAINRFEKARGHKIERQNYV 348
LG + EAI+ FE+ARG+ IE+ YV
Sbjct: 149 RLGWSSHEAIDAFEQARGYSIEKGAYV 175
>Z68319-5|CAA92703.1| 261|Caenorhabditis elegans Hypothetical
protein T23G7.5a protein.
Length = 261
Score = 113 bits (273), Expect = 1e-25
Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 8/146 (5%)
Frame = -1
Query: 764 KTPLQPELF----AYVTSEEDVWTTEQIVKQ-NPSIGAIIDLTNTSKYYDGVHFLRAGLL 600
KTPL F V + V T + +Q N IG +IDLTNT +YY + G+
Sbjct: 76 KTPLDSSFFDGKNMPVELQFGVKTLISLAQQANKQIGLVIDLTNTDRYYKKTEWADHGVK 135
Query: 599 YKKIQVPGQTLPS-ESIVQEFIDTVEEFT--EKCPGMLVGVHCTHGINRTGYMVCRYLMH 429
Y K+ PG + E +VQ+FI+ V+EF ++ G L+GVHCTHG+NRTGY++CRY++
Sbjct: 136 YLKLNCPGHEVNEREDLVQDFINAVKEFVNDKENDGKLIGVHCTHGLNRTGYLICRYMID 195
Query: 428 TLGIAPQEAINRFEKARGHKIERQNY 351
+ +AI+ FE RGH +ER++Y
Sbjct: 196 VDNYSASDAISMFEYYRGHPMEREHY 221
>Z75525-7|CAH10769.1| 573|Caenorhabditis elegans Hypothetical
protein C03D6.3b protein.
Length = 573
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = -1
Query: 674 IGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTL-PSESIVQEFIDTVEEFTEKCPGM 498
IG IDLTNT +YY +Y K+++ G+ + P++ FI V+EF +K P
Sbjct: 59 IGLWIDLTNTDRYYFREEVTEHECIYHKMKMAGRGVSPTQEDTDNFIKLVQEFHKKYPDR 118
Query: 497 LVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKARGHKIERQNYVQD 342
+VGVHCTHG NRTG+++ YL AI F + R I +Q+Y+ D
Sbjct: 119 VVGVHCTHGFNRTGFLIAAYLFQVEEYGLDAAIGEFAENRQKGIYKQDYIDD 170
>Z75525-6|CAA99765.2| 623|Caenorhabditis elegans Hypothetical
protein C03D6.3a protein.
Length = 623
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = -1
Query: 674 IGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTL-PSESIVQEFIDTVEEFTEKCPGM 498
IG IDLTNT +YY +Y K+++ G+ + P++ FI V+EF +K P
Sbjct: 71 IGLWIDLTNTDRYYFREEVTEHECIYHKMKMAGRGVSPTQEDTDNFIKLVQEFHKKYPDR 130
Query: 497 LVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKARGHKIERQNYVQD 342
+VGVHCTHG NRTG+++ YL AI F + R I +Q+Y+ D
Sbjct: 131 VVGVHCTHGFNRTGFLIAAYLFQVEEYGLDAAIGEFAENRQKGIYKQDYIDD 182
>AF003925-1|AAB61344.1| 573|Caenorhabditis elegans mRNA capping
enzyme protein.
Length = 573
Score = 87.0 bits (206), Expect = 2e-17
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = -1
Query: 674 IGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTL-PSESIVQEFIDTVEEFTEKCPGM 498
IG IDLTNT +YY +Y K+++ G+ + P++ FI V+EF +K P
Sbjct: 59 IGLWIDLTNTDRYYFREEVTEHECIYHKMKMAGRGVSPTQEDTDNFIKLVQEFHKKYPDR 118
Query: 497 LVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKARGHKIERQNYVQD 342
+VGVHCTHG NRTG+++ YL AI F + R I +Q+Y+ D
Sbjct: 119 VVGVHCTHGFNRTGFLIAAYLFQVEEYGLDAAIGEFAENRQKGIYKQDYIDD 170
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/97 (20%), Positives = 46/97 (47%)
Frame = -1
Query: 635 YDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTG 456
YD + +R G+ + +P + + + + + V+ + VHC G RTG
Sbjct: 129 YDPENLMRNGIYHYNFPLPDFQACTPNRLLDIVKVVDFALSHGK---IAVHCHAGHGRTG 185
Query: 455 YMVCRYLMHTLGIAPQEAINRFEKARGHKIERQNYVQ 345
++ ++M+ LG++P +A++ R ++ + V+
Sbjct: 186 MVIAAWMMYALGMSPSQAVDTVRSRRAKAVQSKEQVK 222
>AC026301-12|AAK68892.1| 227|Caenorhabditis elegans Hypothetical
protein Y54F10BM.13 protein.
Length = 227
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = -1
Query: 599 YKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGM--LVGVHCTHGINRTGYMVCRYLMHT 426
++ +Q+ LP I+ ++ + V EF +K +V +HC GI+R+ V YLM
Sbjct: 127 FEYLQIDILDLPETRII-DYFERVFEFIDKVRQNEGIVFIHCNAGISRSATFVVAYLMKN 185
Query: 425 LGIAPQEAINRFEKAR 378
L I+ +EA+++ + R
Sbjct: 186 LKISCREAMDKCRETR 201
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division
cycle related protein14, isoform e protein.
Length = 707
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14
phosphatase isoform E protein.
Length = 707
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = -1
Query: 644 SKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGIN 465
+K YD F +AG + + + PS+ I+ +FI V+ V VHC G+
Sbjct: 246 AKNYDASKFTKAGFDHVDLFFIDGSTPSDEIMLKFIKVVDNTKGG-----VAVHCKAGLG 300
Query: 464 RTGYMVCRYLMHTLGIAPQEAI 399
RTG ++ ++M G+ E +
Sbjct: 301 RTGTLIACWMMKEYGLTAGECM 322
>AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protein
protein.
Length = 962
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 566 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMH 429
PS ++ F +E+ E ++ VHC G RTG M+C L++
Sbjct: 141 PSLELMAPFCREAKEWLEADDKHVIAVHCKAGKGRTGVMICALLIY 186
>AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN
phosphatidylinositol 3' phosphatasehomolog DAF-18
protein.
Length = 962
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 566 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMH 429
PS ++ F +E+ E ++ VHC G RTG M+C L++
Sbjct: 141 PSLELMAPFCREAKEWLEADDKHVIAVHCKAGKGRTGVMICALLIY 186
>AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein.
Length = 962
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 566 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMH 429
PS ++ F +E+ E ++ VHC G RTG M+C L++
Sbjct: 141 PSLELMAPFCREAKEWLEADDKHVIAVHCKAGKGRTGVMICALLIY 186
>AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dauer
formation protein 18 protein.
Length = 962
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 566 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMH 429
PS ++ F +E+ E ++ VHC G RTG M+C L++
Sbjct: 141 PSLELMAPFCREAKEWLEADDKHVIAVHCKAGKGRTGVMICALLIY 186
>U41534-8|AAD31049.1| 221|Caenorhabditis elegans Hypothetical
protein C16A3.2 protein.
Length = 221
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = -1
Query: 560 ESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIN 396
+ I++E + + + K G+LV HC G++R+ +V YL+ L I ++A++
Sbjct: 108 DGIIEEAVRIIHDSRSKEEGVLV--HCFLGVSRSATLVAFYLISALSINWRDAVD 160
>Z82096-1|CAB05030.2| 229|Caenorhabditis elegans Hypothetical
protein ZK909.3 protein.
Length = 229
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -1
Query: 683 NPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKIQVPGQTLPSESIVQEFIDTVEEFTEKC 507
N IG + LTN +K YD V L A +L+ ++ +T P E I QEF + V + ++C
Sbjct: 86 NHPIGVMYILTNEAKVYDPV-TLAAAVLHDVVE-DTKTTP-EEIQQEFGNEVFQVVKEC 141
>U41007-16|AAA82276.1| 288|Caenorhabditis elegans Hypothetical
protein C33H5.16 protein.
Length = 288
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -1
Query: 566 PSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMV 447
P++++V+E + +E PG + VHC+ GI RTG +V
Sbjct: 178 PTKAVVKETVLIIEG-----PGGPIAVHCSAGIGRTGSVV 212
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 EFTEKC--PGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKAR 378
EF EKC G +HC GI+R+ + Y+M + + +A R+ K R
Sbjct: 91 EFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGSDDAY-RYVKER 140
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 EFTEKC--PGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKAR 378
EF EKC G +HC GI+R+ + Y+M + + +A R+ K R
Sbjct: 195 EFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGSDDAY-RYVKER 244
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 EFTEKC--PGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKAR 378
EF EKC G +HC GI+R+ + Y+M + + +A R+ K R
Sbjct: 246 EFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGSDDAY-RYVKER 295
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 EFTEKC--PGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAINRFEKAR 378
EF EKC G +HC GI+R+ + Y+M + + +A R+ K R
Sbjct: 246 EFLEKCRRAGKKCLIHCLAGISRSPTLAISYIMRYMKMGSDDAY-RYVKER 295
>AL022716-3|CAA18771.1| 272|Caenorhabditis elegans Hypothetical
protein C24F3.2 protein.
Length = 272
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = -1
Query: 590 IQVPGQTLPSESIVQEFIDTVEEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAP 411
+ +P + + +I++ + + E EK VGVHC ++R+ + YLM+
Sbjct: 58 LDMPDEPILDNAILETAVLYINEGVEKEEN--VGVHCLAAVSRSVSICAAYLMYKNQWPV 115
Query: 410 QEAINRFEKAR 378
++A+ E R
Sbjct: 116 EKALKMIESVR 126
>U41264-1|AAA82421.1| 929|Caenorhabditis elegans Hypothetical
protein F10E7.8 protein.
Length = 929
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 97 AITGQKTYVESQKHKRNIDAANIVVENIRPNPTVDWNNATD 219
AI Q Y+ Q K N+D + + +R T DW A+D
Sbjct: 779 AIKMQSRYLGRQWRKSNMDIISAIYSRVRHRMTDDWAFASD 819
>U40939-1|AAA81700.1| 186|Caenorhabditis elegans Hypothetical
protein F13D11.3 protein.
Length = 186
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -1
Query: 593 KIQVPGQTLPSESIVQEFIDTVEEFTE-KCPGMLVGVHCTHGINRTGYMVCRYLMHTLGI 417
+I+VP I Q F V+ + K G ++C G++R+ + YLM T +
Sbjct: 55 RIEVPVDDNTLAKITQYFEPVVKYIEDAKQQGHNTVIYCAAGVSRSATLTIVYLMVTENL 114
Query: 416 APQEAINRFEKAR 378
+ +EA + + R
Sbjct: 115 SLEEAYLQVNQVR 127
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 640 NIMMVCTFCGRACYTKKFKYLARLCRLKASF 548
N +C F GR K+ + + R CRLK F
Sbjct: 129 NRQYLCRFEGRCAIAKEHRNVCRACRLKQCF 159
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 640 NIMMVCTFCGRACYTKKFKYLARLCRLKASF 548
N +C F GR K+ + + R CRLK F
Sbjct: 129 NRQYLCRFEGRCAIAKEHRNVCRACRLKQCF 159
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 640 NIMMVCTFCGRACYTKKFKYLARLCRLKASF 548
N +C F GR K+ + + R CRLK F
Sbjct: 103 NRQYLCRFEGRCAIAKEHRNVCRACRLKQCF 133
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 640 NIMMVCTFCGRACYTKKFKYLARLCRLKASF 548
N +C F GR K+ + + R CRLK F
Sbjct: 68 NRQYLCRFEGRCAIAKEHRNVCRACRLKQCF 98
>AF100659-7|AAC68967.1| 688|Caenorhabditis elegans Hypothetical
protein F58E2.4 protein.
Length = 688
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 840 KMFPARGHNYLQCGQVIKDXNLICFKNTF 754
K+FP R NYL+ V D N++ K +F
Sbjct: 6 KLFPTRDTNYLEATYVHHDLNVVWLKLSF 34
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = -1
Query: 767 LKTPLQPELFAYVTSEEDVWTTEQIVKQNPSIGAIIDLTNTSKYYDGVHFLRAGLLYKKI 588
L+TPL+ E + + W T Q+ K NP+ A +T K + +R GLL
Sbjct: 278 LETPLRVERLQILDIRHETWKTVQLEKWNPADPAPFPRFHTRK--TKLILIRDGLLL--- 332
Query: 587 QVPGQTLPSE 558
+ G+ +P +
Sbjct: 333 -ITGELIPQD 341
>Z81486-6|CAB03988.2| 309|Caenorhabditis elegans Hypothetical
protein C53A5.8 protein.
Length = 309
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 543 FLNDAFRRQSLARYLNFFV*QARPQKVHTII-IFRRVG*IDYCSNTGVLFYYLFCGPHIF 719
FL+ + R + L +L FF A +H I + VG ++ + L+Y + CG IF
Sbjct: 96 FLSISSRGKFLFFHLQFFT--ALSMNIHRISSVTHPVGHGEFWTKYFKLYYVILCGISIF 153
Query: 720 FAS 728
F S
Sbjct: 154 FTS 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,011,723
Number of Sequences: 27780
Number of extensions: 436311
Number of successful extensions: 1389
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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