Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10l07
         (852 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075413-1|AAL68236.1|  218|Drosophila melanogaster LD35371p pro...   159   4e-39
AE014134-1862|AAF52933.1|  218|Drosophila melanogaster CG5108-PA...   159   4e-39

>AY075413-1|AAL68236.1|  218|Drosophila melanogaster LD35371p
           protein.
          Length = 218

 Score =  159 bits (386), Expect = 4e-39
 Identities = 70/108 (64%), Positives = 85/108 (78%)
 Frame = -2

Query: 842 KKPKIELNPKDXLYKAVENCKPLLQLQPIKRGGITYQVPGPITEKRSLFLAIKWLLETTD 663
           +K  I  NP+  L +AVENC+PLLQ+  IKRGG+TYQVP PIT KRS FLA+KWLLE   
Sbjct: 110 EKTTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKRSYFLAMKWLLEAAR 169

Query: 662 EKERTVHFPEQFAWELLEASNNTGKVVKRKQDLHRQCEANRAYAHYRW 519
           EKER V  PE+ AWE+L+A++  G+V+KRK DLHR CE+NRAYAHYRW
Sbjct: 170 EKERKVSLPEKLAWEILDAAHGQGRVIKRKDDLHRLCESNRAYAHYRW 217


>AE014134-1862|AAF52933.1|  218|Drosophila melanogaster CG5108-PA
           protein.
          Length = 218

 Score =  159 bits (386), Expect = 4e-39
 Identities = 70/108 (64%), Positives = 85/108 (78%)
 Frame = -2

Query: 842 KKPKIELNPKDXLYKAVENCKPLLQLQPIKRGGITYQVPGPITEKRSLFLAIKWLLETTD 663
           +K  I  NP+  L +AVENC+PLLQ+  IKRGG+TYQVP PIT KRS FLA+KWLLE   
Sbjct: 110 EKTTINTNPETLLKQAVENCRPLLQVTAIKRGGVTYQVPVPITTKRSYFLAMKWLLEAAR 169

Query: 662 EKERTVHFPEQFAWELLEASNNTGKVVKRKQDLHRQCEANRAYAHYRW 519
           EKER V  PE+ AWE+L+A++  G+V+KRK DLHR CE+NRAYAHYRW
Sbjct: 170 EKERKVSLPEKLAWEILDAAHGQGRVIKRKDDLHRLCESNRAYAHYRW 217


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,936,428
Number of Sequences: 53049
Number of extensions: 692613
Number of successful extensions: 1461
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)