Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10l04
(777 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 36 4e-04
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 35 7e-04
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 27 0.26
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 27 0.26
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 26 0.45
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 24 1.8
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 24 1.8
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 3.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 7.3
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 9.7
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 9.7
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 35.9 bits (79), Expect = 4e-04
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = -1
Query: 696 LVSAVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKNNPQNI---TLYA 526
+ A++ H+ IVH ++ P++I M+ FGS N Y
Sbjct: 164 ITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTD--FGSSVLIGAPNEIDKFYGTPGYT 221
Query: 525 APEQIKKVY-TPENDMYSLGIVLFELI 448
APE IK+ TP D+YSLGIV ++++
Sbjct: 222 APEVIKQNRPTPAADIYSLGIVAWQML 248
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 35.1 bits (77), Expect = 7e-04
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = -1
Query: 696 LVSAVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKN-NPQNITLYAAP 520
+V A + +HS NI++ ++ PE++ + + V F K Y AP
Sbjct: 475 VVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAP 534
Query: 519 EQI-KKVYTPENDMYSLGIVLFELI 448
E I K + D +SLG+++FEL+
Sbjct: 535 EVILNKGHDISADYWSLGVLMFELL 559
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 26.6 bits (56), Expect = 0.26
Identities = 15/84 (17%), Positives = 39/84 (46%)
Frame = -1
Query: 702 VDLVSAVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKNNPQNITLYAA 523
+D++ + +HS +VH ++ +++ + + F + + + + ++ A
Sbjct: 704 LDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGF-CITEVMMLGSIVGTPVHMA 762
Query: 522 PEQIKKVYTPENDMYSLGIVLFEL 451
PE + Y D+Y+ GI+ + L
Sbjct: 763 PELLSGHYDSSVDVYAFGILFWYL 786
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 26.6 bits (56), Expect = 0.26
Identities = 15/84 (17%), Positives = 39/84 (46%)
Frame = -1
Query: 702 VDLVSAVEAIHSVNIVHHNINPEDIFMTGPDFDLYVGGMFGSLYKTFIKNNPQNITLYAA 523
+D++ + +HS +VH ++ +++ + + F + + + + ++ A
Sbjct: 742 LDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGF-CITEVMMLGSIVGTPVHMA 800
Query: 522 PEQIKKVYTPENDMYSLGIVLFEL 451
PE + Y D+Y+ GI+ + L
Sbjct: 801 PELLSGHYDSSVDVYAFGILFWYL 824
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 25.8 bits (54), Expect = 0.45
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = -1
Query: 543 NITLYAAPEQIKKVYTPENDMYSLGIVLFELIMPFKTALERETTLTNFRNNVQQMPASLS 364
N+TL A E+ K ++ S G +++ PF ER + T +N SLS
Sbjct: 296 NLTL-AKMEKTSKPLPMVDNPESTGNLVYIYNNPFSDVEERRVSKTAMNSNQIVSDNSLS 354
Query: 363 QSHPKLTEIVCKL 325
S KL + + L
Sbjct: 355 SSEEKLKQDILNL 367
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 112 YGQKIIERSIKNYGTFWPSRGAE 44
Y +++ +KN TFW +RG +
Sbjct: 196 YRSAALDQEMKNVLTFWMNRGVD 218
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 23.8 bits (49), Expect = 1.8
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Frame = -1
Query: 696 LVSAVEAIHSVNIVHHNINPEDIFMTG---------PDFDLYVGGMFGSLYKTF-IKNNP 547
++ +V H +VH ++ PE++ + DF L + + G F P
Sbjct: 18 ILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAI-EVQGEAQAWFGFAGTP 76
Query: 546 QNITLYAAPEQIKK-VYTPENDMYSLGIVLFELIMPF 439
Y +PE +KK Y D+++ G++L+ L++ +
Sbjct: 77 G----YLSPEVLKKEPYGKPVDIWACGVILYILLVGY 109
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = -1
Query: 744 LKFLQIFGFYISKFVDLVSAVEAIHSV 664
+ F ++FG Y+S FV + +++ ++V
Sbjct: 114 MAFFRMFGLYLSSFVLVCISMDRYYAV 140
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 563 NVLYRLPNMPPTYKSKSGPVMKISSG--LILWCT 658
NV+YR P T K + GP ++G I+ CT
Sbjct: 395 NVVYRPGENPVTQKREGGPPTGATTGPNEIVTCT 428
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 563 NVLYRLPNMPPTYKSKSGPVMKISSG--LILWCT 658
NV+YR P T K + GP ++G I+ CT
Sbjct: 415 NVVYRPGENPVTQKREGGPPTGATTGPNEIVTCT 448
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 563 NVLYRLPNMPPTYKSKSGPVMKISSG--LILWCT 658
NV+YR P T K + GP ++G I+ CT
Sbjct: 364 NVVYRPGENPVTQKREGGPPTGATTGPNEIVTCT 397
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.8 bits (44), Expect = 7.3
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +1
Query: 7 SSWFVVRSSNLVFQPLGMAKMCRSF*WISQ*FSAHSECDKRGHDKQQDNQLHGVLYSTIY 186
+S F SS +G+A C++F W H D+ Q + GV + I+
Sbjct: 271 TSLFRPLSSEATDLRMGVASFCKAFPW-------HFVVDR-----QLELVQLGVGFMRIF 318
Query: 187 GSLLNRLVPKTLFYSFFRTRC 249
G LNRL + Y F C
Sbjct: 319 GHHLNRLGREISTYFTFTRPC 339
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 681 EAIHSVNIVHHNINPEDIF 625
+A+H+V + H+I +D F
Sbjct: 453 KALHNVMFIQHHIQRQDEF 471
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 9.7
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = -2
Query: 572 TKHLSKTTLKI*LCTLHQNKSKKCTPPKMTC 480
T H+ + + + NKSK T P C
Sbjct: 288 TAHIKDSLIVLTSALQEMNKSKSITEPPKNC 318
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 622 HENIFGINIVVHDIYGMNR 678
HE+IFGI + +++ +R
Sbjct: 1114 HEDIFGITLRTAEVHNRSR 1132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,208
Number of Sequences: 438
Number of extensions: 5581
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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