Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10l02
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK090988-1|BAC03563.1|  151|Homo sapiens protein ( Homo sapiens ...    31   1.7  
J04029-1|AAA60544.1|  561|Homo sapiens keratin 10 protein.             29   9.1  

>AK090988-1|BAC03563.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33669 fis, clone BRAMY2028740. ).
          Length = 151

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = -1

Query: 300 APKSEKLEFVYNCSDLDINEEDLKSLCLTKNIAYF 196
           A +S+   F++NC +L ++ + +K +C  +N+ Y+
Sbjct: 104 ASQSDDFIFIFNCINLHLDNDFVKGVCCVQNLRYW 138


>J04029-1|AAA60544.1|  561|Homo sapiens keratin 10 protein.
          Length = 561

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -1

Query: 378 IDKMLCIAADIKGQVEQLELVNQYLDAPKSEKLEFVYNCSDLDINEE 238
           +D++    AD++ Q+E L     YL   + E+++ + N S  D+N E
Sbjct: 252 LDELTLTQADLEMQIESLTEELAYLKKNREEEMKHLRNVSTGDVNVE 298


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,078,183
Number of Sequences: 237096
Number of extensions: 1147813
Number of successful extensions: 2537
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2537
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)