Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10k21
(810 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022481-1|AAY54897.1| 163|Drosophila melanogaster IP06044p pro... 31 2.5
AE013599-2368|AAF57937.2| 163|Drosophila melanogaster CG6435-PA... 31 2.5
BT022757-1|AAY55173.1| 1257|Drosophila melanogaster LD10349p pro... 29 7.5
AY070977-1|AAL48599.1| 308|Drosophila melanogaster RE07468p pro... 29 7.5
AY060994-1|AAL28542.1| 623|Drosophila melanogaster HL01216p pro... 29 7.5
AF195189-1|AAF27818.1| 229|Drosophila melanogaster yippee inter... 29 7.5
AF145313-1|AAF08394.1| 308|Drosophila melanogaster 26S proteaso... 29 7.5
AE014134-2292|AAF53254.1| 1257|Drosophila melanogaster CG16974-P... 29 7.5
AE014134-869|AAF52215.1| 308|Drosophila melanogaster CG18174-PA... 29 7.5
BT024325-1|ABC86387.1| 399|Drosophila melanogaster IP10749p pro... 29 9.9
AY268066-1|AAQ56702.1| 617|Drosophila melanogaster UDP-GalNAc:p... 29 9.9
AE013599-1354|AAF58610.1| 384|Drosophila melanogaster CG13190-P... 29 9.9
>BT022481-1|AAY54897.1| 163|Drosophila melanogaster IP06044p
protein.
Length = 163
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 588 SSTFLSDDTFLLMPCTNPPAHTSNCYNNSIYKEGRWVANTDSSQCIDFSNYKEL 427
+ T LS+D F C N P +N N ++K G+ + C+DF +L
Sbjct: 71 TDTALSEDAFT--NCVNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKL 122
>AE013599-2368|AAF57937.2| 163|Drosophila melanogaster CG6435-PA
protein.
Length = 163
Score = 30.7 bits (66), Expect = 2.5
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 588 SSTFLSDDTFLLMPCTNPPAHTSNCYNNSIYKEGRWVANTDSSQCIDFSNYKEL 427
+ T LS+D F C N P +N N ++K G+ + C+DF +L
Sbjct: 71 TDTALSEDAFT--NCVNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKL 122
>BT022757-1|AAY55173.1| 1257|Drosophila melanogaster LD10349p
protein.
Length = 1257
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 134 LRFLTIQYKNKITINTITKVAT*PNMNEVNLAAN 235
LR+L++Q K+T T A PN+ E+ LA N
Sbjct: 478 LRYLSVQQNRKLTYLPATLFANTPNIRELLLAEN 511
>AY070977-1|AAL48599.1| 308|Drosophila melanogaster RE07468p
protein.
Length = 308
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/47 (23%), Positives = 29/47 (61%)
Frame = +1
Query: 616 QTLVHLGHGNYQVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNMHQ 756
QT +LGH VQ +++ ++ + +++++++ ++LLN+H+
Sbjct: 174 QTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHK 220
>AY060994-1|AAL28542.1| 623|Drosophila melanogaster HL01216p
protein.
Length = 623
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 134 LRFLTIQYKNKITINTITKVAT*PNMNEVNLAAN 235
LR+L++Q K+T T A PN+ E+ LA N
Sbjct: 200 LRYLSVQQNRKLTYLPATLFANTPNIRELLLAEN 233
>AF195189-1|AAF27818.1| 229|Drosophila melanogaster yippee
interacting protein 5 protein.
Length = 229
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/47 (23%), Positives = 29/47 (61%)
Frame = +1
Query: 616 QTLVHLGHGNYQVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNMHQ 756
QT +LGH VQ +++ ++ + +++++++ ++LLN+H+
Sbjct: 95 QTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHK 141
>AF145313-1|AAF08394.1| 308|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p37B protein.
Length = 308
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/47 (23%), Positives = 29/47 (61%)
Frame = +1
Query: 616 QTLVHLGHGNYQVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNMHQ 756
QT +LGH VQ +++ ++ + +++++++ ++LLN+H+
Sbjct: 174 QTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHK 220
>AE014134-2292|AAF53254.1| 1257|Drosophila melanogaster CG16974-PA
protein.
Length = 1257
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 134 LRFLTIQYKNKITINTITKVAT*PNMNEVNLAAN 235
LR+L++Q K+T T A PN+ E+ LA N
Sbjct: 478 LRYLSVQQNRKLTYLPATLFANTPNIRELLLAEN 511
>AE014134-869|AAF52215.1| 308|Drosophila melanogaster CG18174-PA
protein.
Length = 308
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/47 (23%), Positives = 29/47 (61%)
Frame = +1
Query: 616 QTLVHLGHGNYQVVQHIVYLVDMRMHQLNVHFQQIVFVHQLLLNMHQ 756
QT +LGH VQ +++ ++ + +++++++ ++LLN+H+
Sbjct: 174 QTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHK 220
>BT024325-1|ABC86387.1| 399|Drosophila melanogaster IP10749p
protein.
Length = 399
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 225 WRPIRLQPWK*CRSDWCRRRQTWCSPWWL*DCFFVG 332
W ++++P R DW +T WW+ CF +G
Sbjct: 248 WVDLQIRPMFMSRLDWPEHNRTEALKWWV-KCFLLG 282
>AY268066-1|AAQ56702.1| 617|Drosophila melanogaster
UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
protein.
Length = 617
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Frame = -1
Query: 576 LSDDTFLLMPCTNPPAHTSNCYNNS-----IYK-EGRWVANTDSSQCI 451
+SDD L +N P + C+N +Y E +W+ +T+S QC+
Sbjct: 535 MSDDLCLDASSSNGPVNMVRCHNMGGNQEWVYDAEEKWIRHTNSGQCL 582
>AE013599-1354|AAF58610.1| 384|Drosophila melanogaster CG13190-PA
protein.
Length = 384
Score = 28.7 bits (61), Expect = 9.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 225 WRPIRLQPWK*CRSDWCRRRQTWCSPWWL*DCFFVG 332
W ++++P R DW +T WW+ CF +G
Sbjct: 233 WVDLQIRPMFMSRLDWPEHNRTEALKWWV-KCFLLG 267
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,975,777
Number of Sequences: 53049
Number of extensions: 715073
Number of successful extensions: 2999
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2947
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3798466620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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