Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10k19
         (187 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022875-1|AAY55291.1|  929|Drosophila melanogaster IP12847p pro...    27   4.6  
BT022839-1|AAY55255.1|  929|Drosophila melanogaster IP12947p pro...    27   4.6  
BT015239-1|AAT94468.1| 1241|Drosophila melanogaster RE02133p pro...    27   4.6  
AE014298-188|AAF45612.1|  151|Drosophila melanogaster CG14770-PA...    27   4.6  
AE013599-3940|AAG22200.3| 1241|Drosophila melanogaster CG33988-P...    27   4.6  
BT012479-1|AAS93750.1|  465|Drosophila melanogaster RE13884p pro...    26   6.0  
AE014134-1343|AAF52560.1|  465|Drosophila melanogaster CG14536-P...    26   6.0  

>BT022875-1|AAY55291.1|  929|Drosophila melanogaster IP12847p
           protein.
          Length = 929

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 99  NRKCGYGNFWKSSAYCLVE*NYKFIYVYRY 10
           N K   G  W  +A C    NY+F Y Y Y
Sbjct: 882 NSKDPSGLQWSRAAGCTRTRNYRFFYYYNY 911


>BT022839-1|AAY55255.1|  929|Drosophila melanogaster IP12947p
           protein.
          Length = 929

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 99  NRKCGYGNFWKSSAYCLVE*NYKFIYVYRY 10
           N K   G  W  +A C    NY+F Y Y Y
Sbjct: 882 NSKDPSGLQWSRAAGCTRTRNYRFFYYYNY 911


>BT015239-1|AAT94468.1| 1241|Drosophila melanogaster RE02133p protein.
          Length = 1241

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 99   NRKCGYGNFWKSSAYCLVE*NYKFIYVYRY 10
            N K   G  W  +A C    NY+F Y Y Y
Sbjct: 1194 NSKDPSGLQWSRAAGCTRTRNYRFFYYYNY 1223


>AE014298-188|AAF45612.1|  151|Drosophila melanogaster CG14770-PA
           protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +3

Query: 69  SKSFHSHISYF-PVHHSEH 122
           S+S H H  Y  PVHHSEH
Sbjct: 125 SESHHEHGHYEEPVHHSEH 143


>AE013599-3940|AAG22200.3| 1241|Drosophila melanogaster CG33988-PA
            protein.
          Length = 1241

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 99   NRKCGYGNFWKSSAYCLVE*NYKFIYVYRY 10
            N K   G  W  +A C    NY+F Y Y Y
Sbjct: 1194 NSKDPSGLQWSRAAGCTRTRNYRFFYYYNY 1223


>BT012479-1|AAS93750.1|  465|Drosophila melanogaster RE13884p
           protein.
          Length = 465

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 12  IDTRK*IYNSILLNSKQTISKSFHSHISYFPVHHSEH 122
           I  +K IY+  LL+  Q IS+   S+   +  HH  H
Sbjct: 70  IQDQKLIYSGKLLDDSQKISEVIRSYKDVYQQHHIFH 106


>AE014134-1343|AAF52560.1|  465|Drosophila melanogaster CG14536-PA,
           isoform A protein.
          Length = 465

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 12  IDTRK*IYNSILLNSKQTISKSFHSHISYFPVHHSEH 122
           I  +K IY+  LL+  Q IS+   S+   +  HH  H
Sbjct: 70  IQDQKLIYSGKLLDDSQKISEVIRSYKDVYQQHHIFH 106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,982,143
Number of Sequences: 53049
Number of extensions: 128421
Number of successful extensions: 376
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 24,988,368
effective HSP length: 42
effective length of database: 22,760,310
effective search space used: 432445890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)