Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10k08
(807 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 35 0.001
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 27 0.20
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 27 0.20
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 27 0.20
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 26 0.47
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 25 0.62
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 0.83
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 25 1.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.4
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 2.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 2.5
S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor prot... 23 3.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.8
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 5.8
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 5.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 7.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 7.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 7.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 7.7
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 7.7
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 7.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 7.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 7.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 7.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 7.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 7.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 7.7
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 34.7 bits (76), Expect = 0.001
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRY-YQYNNNCNFIYINV 1
++S LS+K + N Y Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNCKKLYYNI 111
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.20
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 1
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.20
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 1
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 27.1 bits (57), Expect = 0.20
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 1
++S LS+K + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNKTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 25.8 bits (54), Expect = 0.47
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 6/36 (16%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYY------QYNNNCNFIYINV 1
++S LS++ + N Y YNNNC +Y N+
Sbjct: 81 IISSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYNI 116
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.4 bits (53), Expect = 0.62
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYYQYNNNCNFIYIN 4
++S LS+K + N Y YNN + IN
Sbjct: 303 IISSLSNKTIHNNNNYNNYNNKKLYYNIN 331
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 0.83
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYYQYNNNCNFIYINV 1
++S LS+K + N Y YN + IN+
Sbjct: 314 IISSLSNKTIHNNNNYKNYNKKLYYNIINI 343
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 80 CDTTQKQNKLANFFKKPFTSFTLQQVNN 163
CD +K+N+ F K+P T VNN
Sbjct: 12 CDLLKKRNENDPFLKRPITGDEKWVVNN 39
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
++ N YNNNC +Y N+
Sbjct: 339 NNNNYNNNYNNNCKKLYYNI 358
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.9
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = -3
Query: 385 SECKVCFDREKSVCFMPCRHL------AVCTECSRRCKRCCVCNAKIMQR 254
S+ K CF ++ +C +H EC++RC C +++QR
Sbjct: 442 SKTKCCFAQDDGLCPYTLKHKIRVPPGTPIYECNKRCNCDIDCINRVVQR 491
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYYQYNNN 25
++S LS+ + N Y YNNN
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNN 101
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYYQYNNN 25
++S LS+ + N Y YNNN
Sbjct: 80 IISSLSNNTIHNNNYKYNYNNN 101
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYYQYNNN 25
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYYQYNNN 25
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYYQYNNN 25
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.5
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 90 VVSHLSDKDDSDGNRYYQYNNN 25
++S LS+ + N Y YNNN
Sbjct: 81 IISSLSNNTIHNNNYKYNYNNN 102
>S76959-1|AAB33934.1| 85|Apis mellifera olfactory receptor
protein.
Length = 85
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 138 VLLCSRLIIFLSYNAIIINSLFLKN 212
V++ S LII +SY I+ N L + +
Sbjct: 18 VVIVSSLIILISYALILFNILHMSS 42
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 726 KNHLRVLKNLGVSLHHNPWS 667
+ +L VLKN H PW+
Sbjct: 447 RRYLPVLKNFPTRYIHEPWN 466
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 5.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 466 ILAADLSPPQLSVKPSAPPAEPLTQHVSECKVCFDR 359
+L+ S +V P PP PL+ C +C DR
Sbjct: 82 LLSTSPSGQNKAVAPY-PPNHPLSGSKHLCSICGDR 116
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 5.8
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 466 ILAADLSPPQLSVKPSAPPAEPLTQHVSECKVCFDR 359
+L+ S +V P PP PL+ C +C DR
Sbjct: 82 LLSTSPSGQNKAVAPY-PPNHPLSGSKHLCSICGDR 116
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 86 SNNYNYNNYNNNYKPLYYNI 105
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.8 bits (44), Expect = 7.7
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 180 AIIINSLFLKNVVVICN 230
AI++N+L +++ +CN
Sbjct: 40 AIVVNTLISNDILPVCN 56
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 7.7
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = +3
Query: 180 AIIINSLFLKNVVVICN 230
AI++N+L +++ +CN
Sbjct: 78 AIVVNTLISNDILPVCN 94
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 319 SNNYNYNNYNNNYKPLYYNI 338
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 7.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 60 SDGNRYYQYNNNCNFIYINV 1
S+ Y YNNN +Y N+
Sbjct: 308 SNNYNYNNYNNNYKPLYYNI 327
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 7.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 599 ASGTT*MAGFAKIIETATSQHVNDHGL 679
++GTT + +++ SQH HGL
Sbjct: 178 STGTTTTSTGTRLLHGILSQHPQQHGL 204
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,936
Number of Sequences: 438
Number of extensions: 4326
Number of successful extensions: 38
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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