Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10j23
(392 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 75 2e-14
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 34 0.042
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 34 0.042
AC024202-6|AAF36035.1| 199|Caenorhabditis elegans Mediator prot... 33 0.096
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 32 0.13
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 31 0.39
AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical ... 31 0.39
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 31 0.39
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 30 0.51
Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical p... 29 1.2
Z70780-12|CAA94820.2| 329|Caenorhabditis elegans Hypothetical p... 29 1.2
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 29 1.2
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 29 1.2
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 1.6
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 29 1.6
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 1.6
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 28 2.1
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 28 2.1
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 28 2.7
U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical pr... 28 2.7
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 28 2.7
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 28 2.7
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 27 3.6
U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical p... 27 3.6
AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical... 27 3.6
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 27 4.8
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 27 4.8
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 27 4.8
U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical p... 27 4.8
U00036-4|AAK29850.1| 217|Caenorhabditis elegans Ribosomal prote... 27 4.8
AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical ... 27 4.8
Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 27 6.3
Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 27 6.3
AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP ... 27 6.3
AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical ... 27 6.3
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 26 8.4
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 26 8.4
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 26 8.4
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 26 8.4
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 26 8.4
U53332-1|AAK31529.2| 580|Caenorhabditis elegans Hypothetical pr... 26 8.4
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 26 8.4
DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein. 26 8.4
AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical ... 26 8.4
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 26 8.4
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 26 8.4
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 26 8.4
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 74.9 bits (176), Expect = 2e-14
Identities = 33/39 (84%), Positives = 35/39 (89%)
Frame = -3
Query: 294 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQ 178
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQ
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQ 39
Score = 43.2 bits (97), Expect = 7e-05
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = -3
Query: 171 AIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIK 10
A Y+K H AIRAD S K+ K S KR ++LT ERK R+ KKA ++
Sbjct: 237 ATYQKVHSAIRADASPAAKKAAKPS---KRHTAKRLTYDERKQRVADKKALLLQ 287
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 33.9 bits (74), Expect = 0.042
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = -3
Query: 270 NKQYFKRYQVKFKRRREGKTDYY-----ARKRLVVQIEAIYKKAHEAIRADPSHKKKELK 106
NKQYF Y +K K + + KR+ + + +K E KK+E K
Sbjct: 95 NKQYFAFYYIKTKEDGPARDAWKNHKPDGMKRIYISFKKGDEKGDEKKDEKKEEKKEEKK 154
Query: 105 KDSVKQKRWNKRKLTLAERKNRIKQKK 25
++ + K+ +K++ E+K K++K
Sbjct: 155 EEKKEDKKDDKKEAKKEEKKEEKKEEK 181
Score = 26.2 bits (55), Expect = 8.4
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = -3
Query: 255 KRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 76
KR + FK+ E + K+ E ++ E + D KKE KK+ K+++
Sbjct: 125 KRIYISFKKGDEKGDEKKDEKK-----EEKKEEKKEEKKEDKKDDKKEAKKEEKKEEKKE 179
Query: 75 KRKLTLAERKNRIKQKK 25
++K E K K+++
Sbjct: 180 EKKEEKKEEKKEEKKEE 196
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical protein
C34F11.5 protein.
Length = 894
Score = 33.9 bits (74), Expect = 0.042
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = -3
Query: 282 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADP--SHKKKEL 109
+VV+ KR + K++ K K++ EA K+ + IR S KKE
Sbjct: 801 RVVRKLLMVKRARRTLKKKMRKKVKQQMLKKME---EAAAKENEKEIRKTKKKSKDKKEG 857
Query: 108 KKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 7
+K+ K+K K K + R+ + QKKA K+
Sbjct: 858 RKEESKEKAHKKSKPKKSNRRGHMNQKKAKRTKK 891
>AC024202-6|AAF36035.1| 199|Caenorhabditis elegans Mediator protein
19 protein.
Length = 199
Score = 32.7 bits (71), Expect = 0.096
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -3
Query: 255 KRYQVKFKRRREGKTDYYARKRLVVQIEAIYKK-AHEAIRADPSHKKKELKKDSVKQKRW 79
+RY+ F+RR+E Y+ K ++++ Y + + KK KK K+++
Sbjct: 119 ERYRHLFERRKEEPNLAYSEKLNLIRVRQQYDAYGFDDDETEKGFPKKHKKKKKDKKRKK 178
Query: 78 NKRKLTLAERKNRIKQKKASF 16
K +L AE++ R + F
Sbjct: 179 EKEELGDAEKRKRAADEPMEF 199
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 32.3 bits (70), Expect = 0.13
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = -3
Query: 273 KNKQYFKRYQVKFKRRREGKTDYYA----RKRLVVQIEAIYKKAHEAIRA-DPSHKKKEL 109
KN+Q K YQ++ + R+ K D A R +EA ++ EA + K+ EL
Sbjct: 1646 KNQQIIKEYQIECEEARQAKEDIAALLREADRKFRAVEAEREQLREANEGLMQARKQLEL 1705
Query: 108 KKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQ 1
+ D +++ R ++ +E K R++ K A + L+
Sbjct: 1706 ENDELEELRAKGGGIS-SEEKRRLEAKIAQLEEELE 1740
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 30.7 bits (66), Expect = 0.39
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = -3
Query: 174 EAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIK 10
E + KK E R K+KE +KD K+K K K + K R K+K IK
Sbjct: 356 EKVVKKNKEKEREKEKDKEKEKEKDKEKEKEKEKEK-EKDKEKEREKRKSKEKIK 409
>AC006810-1|AAF59633.1| 182|Caenorhabditis elegans Hypothetical
protein Y5H2B.3 protein.
Length = 182
Score = 30.7 bits (66), Expect = 0.39
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = -3
Query: 282 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKK 103
K+ + K+ +V ++E K K L+ + ++ KK EA K +E KK
Sbjct: 67 KLERKKKALANQKVTDPAKKEHKEHEQEAKDLIKKEKSEQKK--EAKEQVNKEKSEEKKK 124
Query: 102 DSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 7
+SVK+K K + + KN Q+ IK+
Sbjct: 125 ESVKRKSSEKLEAPSKKAKNSEDQENQVAIKK 156
Score = 26.6 bits (56), Expect = 6.3
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = -3
Query: 255 KRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 76
KR K +R+++ + + + ++A + I+ + S +KKE K+ K+K
Sbjct: 62 KRILKKLERKKKALANQKVTDPAKKEHKEHEQEAKDLIKKEKSEQKKEAKEQVNKEKSEE 121
Query: 75 KRKLTLAERKNRIKQKKAS 19
K+K ++ +RK+ K + S
Sbjct: 122 KKKESV-KRKSSEKLEAPS 139
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 30.7 bits (66), Expect = 0.39
Identities = 25/79 (31%), Positives = 42/79 (53%)
Frame = -3
Query: 255 KRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 76
KR ++K RR+E K + A + + + ++ E+ D KKK+ K S K K+ +
Sbjct: 250 KREELKEDRRKEKKREMRAVRNVSEDDSSTSSESEES---DFEQKKKKKVKKSKKSKK-D 305
Query: 75 KRKLTLAERKNRIKQKKAS 19
K+K E+K + K KKA+
Sbjct: 306 KKK----EKKEKKKSKKAN 320
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -3
Query: 255 KRYQVKFKRRREGKTDYYARKRLVVQIEAIYKK--AHEAIRADPSHKKKELKKDSVKQKR 82
+R+Q + + +G + + +I YK A E I+A+ K++ELK+D K+K+
Sbjct: 205 RRFQ-RVNIQADGLNNIWGHSPTHEEIHDTYKLRVAAEEIQAENEKKREELKEDRRKEKK 263
Query: 81 WNKR 70
R
Sbjct: 264 REMR 267
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -3
Query: 162 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
KK + + KKKE KK+ K K+ NK K ER+ R +Q+K
Sbjct: 293 KKKVKKSKKSKKDKKKE-KKEKKKSKKANKEK---EERRARREQRK 334
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = -3
Query: 291 GF-VKVVKNKQYF-KRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKK 118
GF V+V+KN F K+ V R E ++R Q+E K+ E +R + K+
Sbjct: 174 GFAVRVIKNHSRFPKQIPVAISTREE-----LQQQRHKQQLEEYEKRNQEILRREEEIKQ 228
Query: 117 KELKKDSVKQKRWNKRKLTLAERKNRIKQK 28
+ +++ + KRK +R+ +KQ+
Sbjct: 229 QNQEREKQINDDFEKRKQEKLQREEEMKQQ 258
>Z79755-7|CAB02103.1| 466|Caenorhabditis elegans Hypothetical
protein F43G9.10 protein.
Length = 466
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = -3
Query: 231 RRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 52
RRR + + Y R+R V + E + K E+ + ++ E K++ +++R R+L L E
Sbjct: 91 RRRHRRHEDYGRRRQVEKPEVLGKVEDESSENEQESEEDEEKQEE-RRERARMRRLELHE 149
Query: 51 RKNRIKQKK 25
NR K ++
Sbjct: 150 -NNREKDEE 157
>Z70780-13|CAD18872.2| 368|Caenorhabditis elegans Hypothetical
protein F46B6.3b protein.
Length = 368
Score = 29.1 bits (62), Expect = 1.2
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = -3
Query: 273 KNKQYFKRYQVKFKRRRE--GKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKD 100
K + Y R Q + ++R E K D + + + V+ I + K + + KK+LKK+
Sbjct: 175 KRRDYDARRQRRDEKRAEKRDKVDKFEKHKNVLDI--LMKPSVPMASTSATTSKKDLKKE 232
Query: 99 ---SVKQK-RWNKRKLTLAERKNRIKQK 28
+ K+K RW K+ ER KQK
Sbjct: 233 KPMTEKEKERWEKQDAKRKERNMIRKQK 260
>Z70780-12|CAA94820.2| 329|Caenorhabditis elegans Hypothetical
protein F46B6.3a protein.
Length = 329
Score = 29.1 bits (62), Expect = 1.2
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = -3
Query: 273 KNKQYFKRYQVKFKRRRE--GKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKD 100
K + Y R Q + ++R E K D + + + V+ I + K + + KK+LKK+
Sbjct: 175 KRRDYDARRQRRDEKRAEKRDKVDKFEKHKNVLDI--LMKPSVPMASTSATTSKKDLKKE 232
Query: 99 ---SVKQK-RWNKRKLTLAERKNRIKQK 28
+ K+K RW K+ ER KQK
Sbjct: 233 KPMTEKEKERWEKQDAKRKERNMIRKQK 260
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = -3
Query: 129 SHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 7
S +KK+L+K+ ++ + +KRK +ER+ + + K+ + K+
Sbjct: 70 SRRKKKLRKEKSRKSQRSKRKKRESERRKKERSKRIARSKK 110
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 29.1 bits (62), Expect = 1.2
Identities = 29/89 (32%), Positives = 41/89 (46%)
Frame = -3
Query: 291 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKE 112
G VK K K+ K K +++ E K + +K+ + E KK + KKKE
Sbjct: 165 GEVKSEK-KEEKKEEAKKEEKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKE 223
Query: 111 LKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
KKD K K+ K K E+K+ K KK
Sbjct: 224 DKKDK-KDKKDKKDKKDKKEKKDDKKSKK 251
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = -3
Query: 231 RRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 52
++ E K + K+ + E +K + KKK+ KK+ K K+ K K +
Sbjct: 180 KKEEKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKDKKDKKDKKDKKD 239
Query: 51 RKNRIKQKKASFIKR 7
+K + KK+ K+
Sbjct: 240 KKEKKDDKKSKKNKK 254
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 28.7 bits (61), Expect = 1.6
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = -3
Query: 282 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKK 103
K K + K + K K+++E K A+++ QIE +K+A E ++ K+++
Sbjct: 130 KQQKIDDFVKTFTDKIKQKQEEKE---AQRQ--EQIEK-WKQASEKLQQQREELKQQI-- 181
Query: 102 DSVKQKRWNKRKLTLAERKNRIKQKK 25
D+ KQK +RK L E K + Q K
Sbjct: 182 DAAKQKLDERRKQKLEELKTDLAQVK 207
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 135 DPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
D +KKE KKD ++K+ K++ E+K K++K
Sbjct: 160 DKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEK 196
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = -3
Query: 282 KVVKNKQYFKRYQVKF---KRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKE 112
KV + K+ K + K K++ E K D ++K + + I K + +++ KK E
Sbjct: 65 KVEEKKEEKKEEEKKADDEKKKTEEKDDKKSKK--TEEKDKISVKKTQETKSERKDKKDE 122
Query: 111 LKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+D K++ K K ++K+ +K KK
Sbjct: 123 KKEDEKKEESKEKSK-DEEKKKDEVKDKK 150
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -3
Query: 162 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
+K E + D +KK+ KKD K+K +K + +++ + K++K
Sbjct: 124 EKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREK 169
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 171 AIYKKAH--EAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIK 10
+ YK +H E +R + K+E K +VKQ W++ K TL ++ + K+ I+
Sbjct: 426 SFYKVSHDSEVLRCEFETVKEEYNK-TVKQSEWDEMKATLNTLRSMNRSLKSEKIR 480
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 171 AIYKKAH--EAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIK 10
+ YK +H E +R + K+E K +VKQ W++ K TL ++ + K+ I+
Sbjct: 426 SFYKVSHDSEVLRCEFETVKEEYNK-TVKQSEWDEMKATLNTLRSMNRSLKSEKIR 480
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = -3
Query: 198 RKRLVVQIEAIYKKAHEAIRADPSHKK-KE---LKKDSVKQKRWNKRKLTLAERKNRIKQ 31
+K +V Q E + KK + SHK+ KE + K+ V++K+ K++ E+K + +
Sbjct: 314 KKGVVDQTEKVIKKKEVELAEGKSHKETKEVTKVSKEIVEEKKEEKKEEKKEEKKEKYED 373
Query: 30 KK 25
K
Sbjct: 374 DK 375
>U97006-5|AAC47967.1| 222|Caenorhabditis elegans Hypothetical
protein C13F10.7 protein.
Length = 222
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+K+LKK + K+K+ +KL ERK K+K+
Sbjct: 131 KEKKLKKKAKKEKK-KAKKLEKKERKKERKEKR 162
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 27.9 bits (59), Expect = 2.7
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = -3
Query: 162 KKAHEAIRADPSHKKKELKKDSVKQKR--WNKRKLTLAERK-NRIKQKKAS 19
KK E +AD + KK+ KKD+ K+K+ +K+K A++K + KQ+ AS
Sbjct: 53 KKRKERKKADKA--KKKTKKDAAKRKKKSKDKKKKQKAQKKAEKPKQQPAS 101
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 27.9 bits (59), Expect = 2.7
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 KNKQYFKRYQVKFK--RRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKD 100
K K+ +R K + +++E K K+ + E + K R +KKE K+
Sbjct: 132 KEKKEKERLDKKLEEDKKKEEKRKEAEEKKKKDEEEKMKKDEERNKRKKEEEEKKEAKRR 191
Query: 99 SVKQKRWNKRK--LTLAERKNRIKQKKASFIKRLQ 1
++K+ KRK + ERK R A F +++
Sbjct: 192 EDEEKKEAKRKEEEAIEERKRRQSALFAKFFSKVE 226
Score = 26.2 bits (55), Expect = 8.4
Identities = 22/79 (27%), Positives = 40/79 (50%)
Frame = -3
Query: 282 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKK 103
++++ K+ K + KR + K + ++RL ++E KK + A+ KK E +K
Sbjct: 112 RILEEKRLEKDKLAEEKRLDKEKKE---KERLDKKLEEDKKKEEKRKEAEEKKKKDEEEK 168
Query: 102 DSVKQKRWNKRKLTLAERK 46
++R NKRK E+K
Sbjct: 169 MKKDEER-NKRKKEEEEKK 186
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKAS 19
KKK+ KK+ K+K+ K K + E+K + K +S
Sbjct: 763 KKKKDKKEKEKKKKSKKSKKSKKEKKTKRKHSSSS 797
>U64598-15|AAK39219.1| 1336|Caenorhabditis elegans Hypothetical
protein C52B9.8 protein.
Length = 1336
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = -3
Query: 255 KRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 76
K + K ++ +E TD + K L +IEA +K +PS K +++ ++ K++ +
Sbjct: 1063 KEKEKKKEKEQEKSTD--SEKDLKRKIEAPIEKIRIKFSGEPSEKYRKINEEPPKKEHRD 1120
Query: 75 KRKLTLAERKNR 40
K + K+R
Sbjct: 1121 KGRKEEKSHKHR 1132
>AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical
protein Y75B8A.29 protein.
Length = 340
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASF 16
KKK+ +K + + K+++ L + K IK+K A+F
Sbjct: 135 KKKDQRKHAEIRSNQIKKRIQLLKNKTAIKEKNANF 170
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 27.1 bits (57), Expect = 4.8
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = -3
Query: 255 KRYQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 76
K+ ++ + R+ + + AR + +++ IY++ + KKKE + K +
Sbjct: 543 KQRKILEEEARKKQEEEEARLKAEEELK-IYEEEKRKKELEEERKKKEELEIKRKAEEEK 601
Query: 75 KRKLTLAERKNRIKQKKA 22
K+K E+K +I ++KA
Sbjct: 602 KKKALEEEKKRKIAEEKA 619
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 135 DPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
D S K+ ++DS + RW + ++KN ++K+
Sbjct: 30 DNSGSNKKAQEDSAELARWEEENRRFEKQKNEAREKR 66
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -3
Query: 135 DPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
D S K+ ++DS + RW + ++KN ++K+
Sbjct: 735 DNSGSNKKAQEDSAELARWEEENRRFEKQKNEAREKR 771
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -2
Query: 124 QEERVKERLGQTEALEQTQANIGREEKQNQAKEG 23
+EE K+ + EA E+ + +EEK+ ++KEG
Sbjct: 80 KEEEKKDATKKEEAKEEKKEEERKEEKKEESKEG 113
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 27.1 bits (57), Expect = 4.8
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = -3
Query: 162 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 7
K A E + KK+ KKD K ++ +++K + K K KK+ KR
Sbjct: 120 KDADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKR 171
>U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical
protein F26B1.1 protein.
Length = 304
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = -3
Query: 186 VVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNR 40
V+ +E KK E+ + + K+++ +S+KQK+ R RK++
Sbjct: 39 VIGLECAKKKKKESKKRKKTQKEEDCDSESIKQKKKKARVKKKEVRKSK 87
>U00036-4|AAK29850.1| 217|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 6 protein.
Length = 217
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = -3
Query: 297 NMGFVKVVK--NKQYFKRYQVKFKRRRE----GKTDYYARKRLVVQIEAIYKKAHEAIRA 136
N+ VK+ + N +YFKR K + GKT+Y ++ I+ + AI+
Sbjct: 130 NVSGVKIPEHINDEYFKRKSTAQKTGKNIFASGKTEYTVSEQRKKDIKTVDAPILAAIKK 189
Query: 135 DPSHK 121
P HK
Sbjct: 190 HPEHK 194
>AF101315-5|AAM34816.1| 457|Caenorhabditis elegans Hypothetical
protein T22H9.1 protein.
Length = 457
Score = 27.1 bits (57), Expect = 4.8
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = -3
Query: 282 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRL-------VVQIEA-IYKKAHEAIRADPS 127
K + K + + + K R E + RK L +++ EA I++ + R D
Sbjct: 358 KAERLKNTLHKMETREKTRAEKRRHAETRKELHDDNIERMLRGEAPIFRTKAQVRRIDAE 417
Query: 126 HKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKA 22
K +ELKKD+ K ++ +RK +K KQKKA
Sbjct: 418 KKYEELKKDN-KLDKYLQRK----AKKESAKQKKA 447
>Z77132-6|CAB00861.3| 1406|Caenorhabditis elegans Hypothetical
protein F54D1.5 protein.
Length = 1406
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 255 KRYQVKFKR-RREGKTDYYARKRLVVQIEAIYKKAHEAI 142
+ ++ K+ R +R ++ Y+ RKR +VQ E KK+ + I
Sbjct: 591 RSFKGKYDRYKRINQSSYFHRKRKIVQKELFKKKSDDQI 629
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -3
Query: 201 ARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRK 67
A ++++ + +A+ K H+ + K E + K+K+ KRK
Sbjct: 152 AHQKVITEFDALAHKVHDYSNKEKDKLKTEFAEYKAKEKKLLKRK 196
>Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical
protein F49E2.2b protein.
Length = 517
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -3
Query: 201 ARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRK 67
A ++++ + +A+ K H+ + K E + K+K+ KRK
Sbjct: 98 AHQKVITEFDALAHKVHDYSNKEKDKLKTEFAEYKAKEKKLLKRK 142
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -3
Query: 201 ARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRK 67
A ++++ + +A+ K H+ + K E + K+K+ KRK
Sbjct: 98 AHQKVITEFDALAHKVHDYSNKEKDKLKTEFAEYKAKEKKLLKRK 142
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 192 RLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKN 43
RL+ +I+ KKA + + + KK L+K + K K+ K + E ++
Sbjct: 3 RLIKKIDKRKKKADKKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARD 52
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 192 RLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKN 43
RL+ +I+ KKA + + + KK L+K + K K+ K + E ++
Sbjct: 3 RLIKKIDKRKKKADKKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARD 52
>AJ276018-1|CAC81666.1| 1122|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1122
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 255 KRYQVKFKR-RREGKTDYYARKRLVVQIEAIYKKAHEAI 142
+ ++ K+ R +R ++ Y+ RKR +VQ E KK+ + I
Sbjct: 307 RSFKGKYDRYKRINQSSYFHRKRKIVQKELFKKKSDDQI 345
>AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical
protein C48E7.11 protein.
Length = 100
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -3
Query: 162 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 4
K+ +EA+ K++E + K K TL ERK QK+ SF+K +
Sbjct: 25 KRNNEAVNRTRQKKRQEENDTAEKVDELKKENETL-ERKVEQLQKELSFLKEM 76
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 26.2 bits (55), Expect = 8.4
Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = -3
Query: 294 MGFVKVVKNKQYFKRYQVKFKRRREG----KTDYYARKRLVVQIEAIYKKAHEAIRADPS 127
M +K+ ++++ KR + + K++++ K D +K+ + E E +
Sbjct: 387 MSTLKMERDERRTKRKEEEEKKKKDAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAED 446
Query: 126 HKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKAS 19
KKK+ + K+ K+K E+K +++K S
Sbjct: 447 EKKKDAGDEKKKKDAGEKKKKDAEEKKKVAEEEKKS 482
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 249 YQVKFKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVKQ 88
+QV R+R+ TD K +V + +Y +R P K++EL + + K+
Sbjct: 355 FQVLSTRKRKNATDDNGVKVVVFLFDLLYFNGEPLVR-KPLRKRRELLRTNFKK 407
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+KE K++ K+K + K ER+ R ++KK
Sbjct: 794 KRKETKEERNKRKEMERAKRLEDERQERKREKK 826
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+KE K++ K+K + K ER+ R ++KK
Sbjct: 1085 KRKETKEERNKRKEMERAKRLEDERQERKREKK 1117
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+KE K++ K+K + K ER+ R ++KK
Sbjct: 1100 KRKETKEERNKRKEMERAKRLEDERQERKREKK 1132
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+KE K++ K+K + K ER+ R ++KK
Sbjct: 1100 KRKETKEERNKRKEMERAKRLEDERQERKREKK 1132
>Z68119-1|CAA92191.1| 523|Caenorhabditis elegans Hypothetical
protein T18D3.1 protein.
Length = 523
Score = 26.2 bits (55), Expect = 8.4
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -3
Query: 228 RREGKTDYYARKRLVVQ-IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 52
+ E K + ARK + E KK + R + KKK+ K ++ +++ KRK +
Sbjct: 430 KHETKEERKARKEKERERAEKKAKKEKDGHREEEKPKKKDKKHETEEERAERKRKEKKEK 489
Query: 51 RKNRIKQKK 25
+ K+K+
Sbjct: 490 ERQERKEKE 498
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+KE K++ K+K + K ER+ R ++KK
Sbjct: 794 KRKETKEERNKRKEMERAKRLEDERQERKREKK 826
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+KE K++ K+K + K ER+ R ++KK
Sbjct: 1085 KRKETKEERNKRKEMERAKRLEDERQERKREKK 1117
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+KE K++ K+K + K ER+ R ++KK
Sbjct: 1100 KRKETKEERNKRKEMERAKRLEDERQERKREKK 1132
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 25
K+KE K++ K+K + K ER+ R ++KK
Sbjct: 1100 KRKETKEERNKRKEMERAKRLEDERQERKREKK 1132
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 26.2 bits (55), Expect = 8.4
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = -3
Query: 228 RREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELKKDSVK-QKRWNKRKLTLAE 52
++EG+T +K +V+ + + + R + +KK+ KKD K +K+ K++ E
Sbjct: 200 KKEGETKGEVKKDALVENPIVTEMSD---RDEKKEEKKDDKKDEKKDEKKEAKKEEKKEE 256
Query: 51 RKNRIKQKK 25
+K K++K
Sbjct: 257 KKEEKKEEK 265
>U53332-1|AAK31529.2| 580|Caenorhabditis elegans Hypothetical
protein F59G1.4 protein.
Length = 580
Score = 26.2 bits (55), Expect = 8.4
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -3
Query: 165 YKKAHEAI---RADPSHKKKELKKDSVKQKRWNKRKLTLAERK 46
YKKA + I + D +KKK+ K+ K+K R + L RK
Sbjct: 433 YKKAQDEITRKKEDEENKKKKEKEKVEKEKMKALRHIQLTSRK 475
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTL--AERKNRIKQKKASFIKRL 4
K+KEL+K + +K + +L AERKN+++ + + I+ L
Sbjct: 512 KQKELEKLNAAKKEEERMELEKLDAERKNKLRMARRTIIRYL 553
>DQ178637-1|ABD75716.1| 580|Caenorhabditis elegans F59G1.4 protein.
Length = 580
Score = 26.2 bits (55), Expect = 8.4
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -3
Query: 165 YKKAHEAI---RADPSHKKKELKKDSVKQKRWNKRKLTLAERK 46
YKKA + I + D +KKK+ K+ K+K R + L RK
Sbjct: 433 YKKAQDEITRKKEDEENKKKKEKEKVEKEKMKALRHIQLTSRK 475
>AL032636-4|CAA21606.1| 123|Caenorhabditis elegans Hypothetical
protein Y40B1B.7 protein.
Length = 123
Score = 26.2 bits (55), Expect = 8.4
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 KNKQYFKRYQVK----FKRRREGKTDYYARKRLVVQIEAIYKKAHEAIRADPSHKKKELK 106
K KQ K ++K K + K + A+K +V +++ ++ R + KKE K
Sbjct: 21 KTKQEKKHSEIKKVKTLKSTWDKKMELKAKKDMVKRVQDNIREKQVQERQE----KKERK 76
Query: 105 KDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQ 1
+ K++ N+RK + ++ +I + K + ++L+
Sbjct: 77 VEQEKRRLENERKAEIVQKITKIHKLKKTKKRQLR 111
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/41 (21%), Positives = 26/41 (63%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQ 1
+KK+ +++ KQK+ ++ L E++ ++K+K+ ++ +
Sbjct: 216 EKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAE 256
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/41 (21%), Positives = 26/41 (63%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQ 1
+KK+ +++ KQK+ ++ L E++ ++K+K+ ++ +
Sbjct: 252 EKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAE 292
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/41 (21%), Positives = 26/41 (63%)
Frame = -3
Query: 123 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQ 1
+KK+ +++ KQK+ ++ L E++ ++K+K+ ++ +
Sbjct: 252 EKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARKAE 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,688,348
Number of Sequences: 27780
Number of extensions: 166882
Number of successful extensions: 910
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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