Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10j12
(292 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 24 0.33
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 1.3
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 1.3
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 1.3
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 1.8
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 2.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 2.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 4.1
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 4.1
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 20 5.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 20 5.4
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 20 5.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 7.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 7.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 20 7.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 20 7.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 20 7.1
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 19 9.4
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 19 9.4
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 24.2 bits (50), Expect = 0.33
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 163 FLTILRREAP*RVPYLPVIP 222
FL ++ P VPY PVIP
Sbjct: 639 FLVVISSSNPLNVPYGPVIP 658
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 1.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 243 GQTYQKGWNYWQIWHTL 193
G+ W+Y+ I+HTL
Sbjct: 165 GKNITTPWDYYYIYHTL 181
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 1.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 243 GQTYQKGWNYWQIWHTL 193
G+ W+Y+ I+HTL
Sbjct: 180 GKNITTPWDYYYIYHTL 196
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.2 bits (45), Expect = 1.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 243 GQTYQKGWNYWQIWHTL 193
G+ W+Y+ I+HTL
Sbjct: 68 GKNITTPWDYYYIYHTL 84
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.8 bits (44), Expect = 1.8
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 69 SLTRPDADTRTFHSILTTK*ASILCVL 149
+ TRP T TFH IL K A+ L VL
Sbjct: 334 TFTRPCGITLTFHEIL--KRANTLFVL 358
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 2.3
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = -3
Query: 203 GTRYGASLRKMVKKMEVTQHAKYTCSFCGK 114
G + S + V T YTC CGK
Sbjct: 210 GKGFTCSKQLKVHTRTHTGEKPYTCDICGK 239
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 2.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 196 RVPYLPVIPTFLV 234
R+P LP+IP + V
Sbjct: 784 RIPILPMIPVYCV 796
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 4.1
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = -1
Query: 256 GLPKWPNVPKRLELLANMAHVTVPL 182
G+P PN+P + + M + P+
Sbjct: 428 GMPPLPNMPGSMPTMPTMPSMAGPI 452
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 4.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 168 DHFT*RGTVTCAIFASNSNLFGTFGHFGK 254
D+F V A+FA S+ + F FG+
Sbjct: 596 DNFGPLSNVRFAVFALGSSAYPNFCAFGR 624
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 20.2 bits (40), Expect = 5.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 276 VNFCIGEVYQNGQT 235
VN+ +G +QNG T
Sbjct: 167 VNYTLGHHHQNGAT 180
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.2 bits (40), Expect = 5.4
Identities = 6/8 (75%), Positives = 6/8 (75%)
Frame = -3
Query: 137 YTCSFCGK 114
YTC CGK
Sbjct: 372 YTCDVCGK 379
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.2 bits (40), Expect = 5.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 83 RCRHKNVS*HPYHK 124
+CR+ N S PY+K
Sbjct: 435 QCRYPNASVTPYNK 448
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.8 bits (39), Expect = 7.1
Identities = 7/28 (25%), Positives = 15/28 (53%)
Frame = +1
Query: 82 QMPTQERFIASLPQNEQVYFACWVTSIF 165
Q+P FI + + + ++C+V + F
Sbjct: 1325 QLPEGSLFIKEVDRTDAGEYSCYVENTF 1352
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 19.8 bits (39), Expect = 7.1
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 146 HAKYTCSFCG 117
H +YTC CG
Sbjct: 480 HDEYTCMDCG 489
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 7.1
Identities = 5/9 (55%), Positives = 5/9 (55%)
Frame = -2
Query: 228 KGWNYWQIW 202
K WN W W
Sbjct: 694 KSWNKWNDW 702
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 7.1
Identities = 5/9 (55%), Positives = 5/9 (55%)
Frame = -2
Query: 228 KGWNYWQIW 202
K WN W W
Sbjct: 694 KSWNKWNDW 702
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 7.1
Identities = 5/9 (55%), Positives = 5/9 (55%)
Frame = -2
Query: 228 KGWNYWQIW 202
K WN W W
Sbjct: 694 KSWNKWNDW 702
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 19.4 bits (38), Expect = 9.4
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = +1
Query: 31 ENTQAPPATVLLHRLQDQMPTQERFIASLPQNEQVYFACWVTSI 162
E+ P + + + QDQ F+A ++ + F WV+++
Sbjct: 417 EHRPFEPKSTAVQKYQDQDYQPIYFVADSFEDAKEKFRRWVSTM 460
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 19.4 bits (38), Expect = 9.4
Identities = 9/36 (25%), Positives = 16/36 (44%)
Frame = -3
Query: 110 AMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 3
A +C GI S + + + WV + ++ RS
Sbjct: 111 AKNENCSGITSAYKIEIDMCDRLWVLDSGLINNVRS 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,747
Number of Sequences: 438
Number of extensions: 2192
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5869407
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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