Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10j02
         (777 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122125-1|AAM52637.1|  910|Drosophila melanogaster GH21728p pro...   147   2e-35
AE013599-2527|AAF57818.1|  910|Drosophila melanogaster CG4954-PA...   147   2e-35
AY095032-1|AAM11360.1|  676|Drosophila melanogaster LD18186p pro...    29   9.4  
AE013599-3409|AAF46858.4|  676|Drosophila melanogaster CG12489-P...    29   9.4  

>AY122125-1|AAM52637.1|  910|Drosophila melanogaster GH21728p protein.
          Length = 910

 Score =  147 bits (356), Expect = 2e-35
 Identities = 69/100 (69%), Positives = 87/100 (87%), Gaps = 1/100 (1%)
 Frame = -2

Query: 773  IREESLRTYLFTYAHVYASLSLRSLADMFELPRQRVHSLVSKMIINEELLASLDDPSECA 594
            I+EESLRTYLFTY++VY S+S+ SLA M+ELP  +VHS++SKMIINEEL+ASLDDPSE  
Sbjct: 749  IKEESLRTYLFTYSNVYTSISIPSLAQMYELPVPKVHSIISKMIINEELMASLDDPSETV 808

Query: 593  ILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSFF 477
             +HRSEP+R+QALA+Q  DKV NLVD NE++F+ KQG+FF
Sbjct: 809  GMHRSEPSRLQALAMQFVDKVTNLVDVNEKVFDMKQGNFF 848


>AE013599-2527|AAF57818.1|  910|Drosophila melanogaster CG4954-PA
            protein.
          Length = 910

 Score =  147 bits (356), Expect = 2e-35
 Identities = 69/100 (69%), Positives = 87/100 (87%), Gaps = 1/100 (1%)
 Frame = -2

Query: 773  IREESLRTYLFTYAHVYASLSLRSLADMFELPRQRVHSLVSKMIINEELLASLDDPSECA 594
            I+EESLRTYLFTY++VY S+S+ SLA M+ELP  +VHS++SKMIINEEL+ASLDDPSE  
Sbjct: 749  IKEESLRTYLFTYSNVYTSISIPSLAQMYELPVPKVHSIISKMIINEELMASLDDPSETV 808

Query: 593  ILHRSEPTRMQALALQLADKVGNLVDSNERIFE-KQGSFF 477
             +HRSEP+R+QALA+Q  DKV NLVD NE++F+ KQG+FF
Sbjct: 809  GMHRSEPSRLQALAMQFVDKVTNLVDVNEKVFDMKQGNFF 848


>AY095032-1|AAM11360.1|  676|Drosophila melanogaster LD18186p
           protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 508 SFESTKFPTLSASCSARACIRVGSERCKIAHSLGSSNDAKSSSLMIILDTR 660
           S + +   + SAS SA A     +  C   HS  SS+   +SS    LD R
Sbjct: 214 SLQPSPSASASASASASASASASTSACSQTHSNSSSSSPSNSSSQTGLDER 264


>AE013599-3409|AAF46858.4|  676|Drosophila melanogaster CG12489-PA
           protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 508 SFESTKFPTLSASCSARACIRVGSERCKIAHSLGSSNDAKSSSLMIILDTR 660
           S + +   + SAS SA A     +  C   HS  SS+   +SS    LD R
Sbjct: 214 SLQPSPSASASASASASASASASTSACSQTHSNSSSSSPSNSSSQTGLDER 264


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,882,843
Number of Sequences: 53049
Number of extensions: 541195
Number of successful extensions: 1614
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)