Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10i24
(822 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein. 36 0.18
BC045732-1|AAH45732.1| 209|Homo sapiens LOC339742 protein protein. 35 0.41
BC012191-1|AAH12191.1| 377|Homo sapiens hypothetical protein MG... 35 0.41
M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel al... 33 0.94
M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel al... 33 0.94
AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel, voltag... 33 0.94
AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel, voltag... 33 0.94
AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel, voltag... 33 0.94
AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel, voltag... 33 0.94
AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel, voltag... 33 0.94
AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel, voltag... 33 0.94
AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel, voltag... 33 0.94
AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel, voltag... 33 0.94
CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein. 32 2.2
BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein. 32 2.2
BC052249-1|AAH52249.1| 582|Homo sapiens CSAD protein protein. 32 2.2
BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein. 32 2.2
BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein. 32 2.2
AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain prote... 32 2.2
BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 32 2.9
AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protei... 32 2.9
AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 32 2.9
AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 32 2.9
AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein. 32 2.9
AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein. 32 2.9
BC009326-1|AAH09326.2| 595|Homo sapiens SCARF2 protein protein. 31 3.8
BC000584-1|AAH00584.2| 243|Homo sapiens SCARF2 protein protein. 31 3.8
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 31 3.8
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 31 3.8
L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor prot... 31 5.0
AL772202-3|CAI16741.1| 235|Homo sapiens chromosome 9 open readi... 31 6.7
AK127745-1|BAC87111.1| 451|Homo sapiens . protein. 31 6.7
AF063601-1|AAG43160.1| 647|Homo sapiens brain my043 protein pro... 31 6.7
BC013376-1|AAH13376.1| 401|Homo sapiens MARVEL domain containin... 30 8.8
BC011893-1|AAH11893.1| 401|Homo sapiens MARVEL domain containin... 30 8.8
BC005052-1|AAH05052.1| 242|Homo sapiens MARVELD3 protein protein. 30 8.8
AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens ... 30 8.8
AK056842-1|BAB71294.1| 410|Homo sapiens protein ( Homo sapiens ... 30 8.8
>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
Length = 1134
Score = 35.9 bits (79), Expect = 0.18
Identities = 31/96 (32%), Positives = 38/96 (39%), Gaps = 7/96 (7%)
Frame = +2
Query: 506 PPPLRCDSGSVRQGKQAPAVH------KRP*GRDPSARTHAGPRRTHSARHRAPPADRVR 667
PPP + R +Q P +R R PS GPR T AR R P+ R
Sbjct: 1005 PPPQTRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTPQARRRPRPSPRRL 1064
Query: 668 SRAP-DLAGPSCMVRPEAGARVARGRLRDAPCHRAW 772
R+P L P P A R R R +P R+W
Sbjct: 1065 LRSPHSLCSPRLRPGPRADPR--RERASTSPPPRSW 1098
>BC045732-1|AAH45732.1| 209|Homo sapiens LOC339742 protein protein.
Length = 209
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/52 (44%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Frame = +2
Query: 584 RDPSARTHAGP------RRTHSARH--RAPPADRVRSRAPDLAGPSCMVRPE 715
R P+AR A P RTHS RH APP R P AG SC+ PE
Sbjct: 1 RSPAARQVAPPGGPSSLARTHSRRHPDHAPPPVRPSCSRPLCAGSSCLATPE 52
>BC012191-1|AAH12191.1| 377|Homo sapiens hypothetical protein
MGC4655 protein.
Length = 377
Score = 34.7 bits (76), Expect = 0.41
Identities = 23/57 (40%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +2
Query: 584 RDPSARTHAGPRRT-HSARHRAPPADRVRSRAPDLAGPSCMVRPEAGARVARGRLRD 751
R +AR RR RHR PP D RS P P RP G R RLRD
Sbjct: 2 RSATARPRRRARREGEGGRHRGPPPDPARSSYPTRVQPR---RPTKGTHRRRPRLRD 55
>M94173-1|AAA51898.1| 2237|Homo sapiens N-type calcium channel alpha-1
subunit protein.
Length = 2237
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 889 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 945
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 946 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 991
>M94172-1|AAA51897.1| 2339|Homo sapiens N-type calcium channel alpha-1
subunit protein.
Length = 2339
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 889 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 945
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 946 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 991
>AL772363-4|CAI17142.1| 2337|Homo sapiens calcium channel,
voltage-dependent, N type, alphar), member 6 protein.
Length = 2337
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 889 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 945
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 946 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 991
>AL772363-3|CAI17144.1| 2339|Homo sapiens calcium channel,
voltage-dependent, N type, alpha protein.
Length = 2339
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 889 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 945
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 946 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 991
>AL772363-2|CAI17143.1| 2338|Homo sapiens calcium channel,
voltage-dependent, N type, alpha protein.
Length = 2338
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 890 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 946
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 947 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 992
>AL772363-1|CAI17141.1| 2237|Homo sapiens calcium channel,
voltage-dependent, N type, alpha7a (RPL7A) protein.
Length = 2237
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 889 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 945
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 946 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 991
>AL591424-4|CAI40688.1| 2337|Homo sapiens calcium channel,
voltage-dependent, N type, alpha(TBP)-associated factor,
100kD protein.
Length = 2337
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 889 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 945
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 946 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 991
>AL591424-3|CAI40687.1| 2339|Homo sapiens calcium channel,
voltage-dependent, N type, alphabeta family protein.
Length = 2339
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 889 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 945
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 946 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 991
>AL591424-2|CAI40686.1| 2338|Homo sapiens calcium channel,
voltage-dependent, N type, alphaate 3A protein.
Length = 2338
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 890 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 946
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 947 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 992
>AL591424-1|CAI40685.1| 2237|Homo sapiens calcium channel,
voltage-dependent, N type, alpha, alpha protein.
Length = 2237
Score = 33.5 bits (73), Expect = 0.94
Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Frame = +2
Query: 476 HREAHRNVAYPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHSARHRAPPA 655
HR + A PP R + G + H+R P PRR + RH+ P
Sbjct: 889 HRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRG---SPEEAAEREPRRHRAHRHQDPSK 945
Query: 656 D--------RVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
+ R R R AGP E AR R R + P H A
Sbjct: 946 ECAGAKGERRARHRGGPRAGPREAESGEEPARRHRARHKAQPAHEA 991
>CR457211-1|CAG33492.1| 615|Homo sapiens LMO6 protein.
Length = 615
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 491 RNVAYPPPLRCDSGSVRQGKQAPAVHKRP*G--RDPSARTHAGPRRTHSARHRAPPADRV 664
R+V PPP ++R A P RDP + GPRRT SA PPA R
Sbjct: 444 RSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPLV-SEGGPRRTLSA----PPAQRR 498
Query: 665 RSRAPDLAGPS 697
R R+P PS
Sbjct: 499 RPRSPPPRAPS 509
>BT007423-1|AAP36091.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 491 RNVAYPPPLRCDSGSVRQGKQAPAVHKRP*G--RDPSARTHAGPRRTHSARHRAPPADRV 664
R+V PPP ++R A P RDP + GPRRT SA PPA R
Sbjct: 444 RSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPLV-SEGGPRRTLSA----PPAQRR 498
Query: 665 RSRAPDLAGPS 697
R R+P PS
Sbjct: 499 RPRSPPPRAPS 509
>BC052249-1|AAH52249.1| 582|Homo sapiens CSAD protein protein.
Length = 582
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2
Query: 644 APPADRVRSRAPDLAGPSCMVRPEAGARVARGRLRDAPCHRA 769
A P+ R R+ LA P+C RP AG+ AR RL AP H A
Sbjct: 8 ALPSVRTTLRSLGLA-PTCQARPPAGSLAAR-RLLQAPAHPA 47
>BC016856-1|AAH16856.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 491 RNVAYPPPLRCDSGSVRQGKQAPAVHKRP*G--RDPSARTHAGPRRTHSARHRAPPADRV 664
R+V PPP ++R A P RDP + GPRRT SA PPA R
Sbjct: 444 RSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPLV-SEGGPRRTLSA----PPAQRR 498
Query: 665 RSRAPDLAGPS 697
R R+P PS
Sbjct: 499 RPRSPPPRAPS 509
>BC002468-1|AAH02468.1| 615|Homo sapiens LIM domain only 6 protein.
Length = 615
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 491 RNVAYPPPLRCDSGSVRQGKQAPAVHKRP*G--RDPSARTHAGPRRTHSARHRAPPADRV 664
R+V PPP ++R A P RDP + GPRRT SA PPA R
Sbjct: 444 RSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPLV-SEGGPRRTLSA----PPAQRR 498
Query: 665 RSRAPDLAGPS 697
R R+P PS
Sbjct: 499 RPRSPPPRAPS 509
>AJ011654-1|CAA09726.1| 615|Homo sapiens triple LIM domain protein
protein.
Length = 615
Score = 32.3 bits (70), Expect = 2.2
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 491 RNVAYPPPLRCDSGSVRQGKQAPAVHKRP*G--RDPSARTHAGPRRTHSARHRAPPADRV 664
R+V PPP ++R A P RDP + GPRRT SA PPA R
Sbjct: 444 RSVPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPLV-SEGGPRRTLSA----PPAQRR 498
Query: 665 RSRAPDLAGPS 697
R R+P PS
Sbjct: 499 RPRSPPPRAPS 509
>BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 458 RRSGGRHREAHRNVA--YPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 631
RRS + R++ R+ P++ S GK+ + +RP GR P R+ + R S
Sbjct: 305 RRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRP-GRSPKRRSLSPKPRDKS 363
Query: 632 ARHRAPPADRVRSR 673
R R+P + RS+
Sbjct: 364 RRSRSPLLNDRRSK 377
>AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protein
kinase protein.
Length = 1007
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 458 RRSGGRHREAHRNVA--YPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 631
RRS + R++ R+ P++ S GK+ + +RP GR P R+ + R S
Sbjct: 305 RRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRP-GRSPKRRSLSPKPRDKS 363
Query: 632 ARHRAPPADRVRSR 673
R R+P + RS+
Sbjct: 364 RRSRSPLLNDRRSK 377
>AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 458 RRSGGRHREAHRNVA--YPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 631
RRS + R++ R+ P++ S GK+ + +RP GR P R+ + R S
Sbjct: 305 RRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRP-GRSPKRRSLSPKPRDKS 363
Query: 632 ARHRAPPADRVRSR 673
R R+P + RS+
Sbjct: 364 RRSRSPLLNDRRSK 377
>AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 458 RRSGGRHREAHRNVA--YPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 631
RRS + R++ R+ P++ S GK+ + +RP GR P R+ + R S
Sbjct: 305 RRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRP-GRSPKRRSLSPKPRDKS 363
Query: 632 ARHRAPPADRVRSR 673
R R+P + RS+
Sbjct: 364 RRSRSPLLNDRRSK 377
>AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein.
Length = 1007
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 458 RRSGGRHREAHRNVA--YPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 631
RRS + R++ R+ P++ S GK+ + +RP GR P R+ + R S
Sbjct: 305 RRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRP-GRSPKRRSLSPKPRDKS 363
Query: 632 ARHRAPPADRVRSR 673
R R+P + RS+
Sbjct: 364 RRSRSPLLNDRRSK 377
>AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein.
Length = 1028
Score = 31.9 bits (69), Expect = 2.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 458 RRSGGRHREAHRNVA--YPPPLRCDSGSVRQGKQAPAVHKRP*GRDPSARTHAGPRRTHS 631
RRS + R++ R+ P++ S GK+ + +RP GR P R+ + R S
Sbjct: 326 RRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENRSPSRRP-GRSPKRRSLSPKPRDKS 384
Query: 632 ARHRAPPADRVRSR 673
R R+P + RS+
Sbjct: 385 RRSRSPLLNDRRSK 398
>BC009326-1|AAH09326.2| 595|Homo sapiens SCARF2 protein protein.
Length = 595
Score = 31.5 bits (68), Expect = 3.8
Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Frame = +2
Query: 428 QVSGVHTVRARRSGGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAV-HKRP*GRDPSART 604
+VS +H + + GR + P K A V H P RDP+ R
Sbjct: 393 KVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRP 452
Query: 605 HAGPRRTHSARHRAPPADRVRSRAPDLAGPSCMVRPEAGARVARGRL 745
P + +PP R R R P L P+ P A A L
Sbjct: 453 PGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASML 499
>BC000584-1|AAH00584.2| 243|Homo sapiens SCARF2 protein protein.
Length = 243
Score = 31.5 bits (68), Expect = 3.8
Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Frame = +2
Query: 428 QVSGVHTVRARRSGGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAV-HKRP*GRDPSART 604
+VS +H + + GR + P K A V H P RDP+ R
Sbjct: 41 KVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRP 100
Query: 605 HAGPRRTHSARHRAPPADRVRSRAPDLAGPSCMVRPEAGARVARGRL 745
P + +PP R R R P L P+ P A A L
Sbjct: 101 PGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASML 147
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 31.5 bits (68), Expect = 3.8
Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Frame = +2
Query: 428 QVSGVHTVRARRSGGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAV-HKRP*GRDPSART 604
+VS +H + + GR + P K A V H P RDP+ R
Sbjct: 664 KVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRP 723
Query: 605 HAGPRRTHSARHRAPPADRVRSRAPDLAGPSCMVRPEAGARVARGRL 745
P + +PP R R R P L P+ P A A L
Sbjct: 724 PGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASML 770
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 31.5 bits (68), Expect = 3.8
Identities = 28/107 (26%), Positives = 37/107 (34%), Gaps = 1/107 (0%)
Frame = +2
Query: 428 QVSGVHTVRARRSGGRHREAHRNVAYPPPLRCDSGSVRQGKQAPAV-HKRP*GRDPSART 604
+VS +H + + GR + P K A V H P RDP+ R
Sbjct: 664 KVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRP 723
Query: 605 HAGPRRTHSARHRAPPADRVRSRAPDLAGPSCMVRPEAGARVARGRL 745
P + +PP R R R P L P+ P A A L
Sbjct: 724 PGLPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASML 770
>L12397-1|AAL58637.1| 350|Homo sapiens Dopamine D4 receptor
protein.
Length = 350
Score = 31.1 bits (67), Expect = 5.0
Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Frame = +2
Query: 539 RQGKQAPAVHKRP*GRDPSARTHAGPRRTHS--ARHRAPPADRVRSR------APDLAGP 694
R+ K +RP G P + T PR APPA + AP GP
Sbjct: 226 RRAKLHGRAPRRPSGPGPPSPTPPAPRLPQDPCGPDCAPPAPGLPRGPCGPDCAPAAPGP 285
Query: 695 SCMV-RPEAGARVARGRLRDAPCHRAWN 775
SC RP + R + APC R W+
Sbjct: 286 SCCAGRPSSWCTSRRRCVLPAPCPRGWS 313
>AL772202-3|CAI16741.1| 235|Homo sapiens chromosome 9 open reading
frame 47 protein.
Length = 235
Score = 30.7 bits (66), Expect = 6.7
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 8/86 (9%)
Frame = +2
Query: 524 DSGSVRQGKQAPAVHKRP*GRDPSARTHAGP-------RRTHSARHR-APPADRVRSRAP 679
DSG+ R+ + A RP G D ++ AGP + + RHR APPA + AP
Sbjct: 76 DSGTRRRLQDATEQDPRP-GNDVASAETAGPPSPSGIRAQDRAPRHRRAPPARMPVAPAP 134
Query: 680 DLAGPSCMVRPEAGARVARGRLRDAP 757
G R G RV +D P
Sbjct: 135 SADGGERRARAGRGTRVGGWGPKDPP 160
>AK127745-1|BAC87111.1| 451|Homo sapiens . protein.
Length = 451
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 584 RDPSARTHAGPRRTHSARHRAPPADRVRSRAPDLAGPSCMVRPEAGARVA 733
RDP A S++H PP RSRA L GP + P G + A
Sbjct: 22 RDPPAPASGPGFPGSSSQHPGPPPCLTRSRACALGGPRSLTCPGLGPQFA 71
>AF063601-1|AAG43160.1| 647|Homo sapiens brain my043 protein
protein.
Length = 647
Score = 30.7 bits (66), Expect = 6.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -2
Query: 533 YQNHISVVEGTRRYDEPPYDDRHYDERAQYERPRPAHHIPNGDMYSRRSPAPMYS 369
Y H+ +++ T+ EP D Y E A+ E+P P H D P ++S
Sbjct: 150 YLLHVDLIKETKLSAEPAPDFSDYSEMAKVEQPVPDHSELVEDSSPDSEPVDLFS 204
>BC013376-1|AAH13376.1| 401|Homo sapiens MARVEL domain containing 3
protein.
Length = 401
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +2
Query: 572 RP*GRDPSARTHAGPRRTHSARHRAPPADRVRSRAPD 682
RP RDP R H RTH R R P D R R+ D
Sbjct: 13 RPRERDPGRRPHPDQGRTHD-RPRDRPGDPRRKRSSD 48
>BC011893-1|AAH11893.1| 401|Homo sapiens MARVEL domain containing 3
protein.
Length = 401
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +2
Query: 572 RP*GRDPSARTHAGPRRTHSARHRAPPADRVRSRAPD 682
RP RDP R H RTH R R P D R R+ D
Sbjct: 13 RPRERDPGRRPHPDQGRTHD-RPRDRPGDPRRKRSSD 48
>BC005052-1|AAH05052.1| 242|Homo sapiens MARVELD3 protein protein.
Length = 242
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +2
Query: 572 RP*GRDPSARTHAGPRRTHSARHRAPPADRVRSRAPD 682
RP RDP R H RTH R R P D R R+ D
Sbjct: 36 RPRERDPGRRPHPDQGRTHD-RPRDRPGDPRRKRSSD 71
>AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ39402 fis, clone PLACE6011975. ).
Length = 180
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 731 RHAPPPRDAPYMRDRPGPVRGYE-RGPPAAP 642
RH PPR P +R PG V G PP+ P
Sbjct: 104 RHPHPPRPEPRLRAEPGKVTGASVPAPPSGP 134
>AK056842-1|BAB71294.1| 410|Homo sapiens protein ( Homo sapiens
cDNA FLJ32280 fis, clone PROST2000176, weakly similar to
RD PROTEIN. ).
Length = 410
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = +2
Query: 572 RP*GRDPSARTHAGPRRTHSARHRAPPADRVRSRAPD 682
RP RDP R H RTH R R P D R R+ D
Sbjct: 13 RPRERDPGRRPHPDQGRTHD-RPRDRPGDPRRKRSSD 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,292,795
Number of Sequences: 237096
Number of extensions: 2623361
Number of successful extensions: 11878
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 10895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11849
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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