Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10i18
(846 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 1.2
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 3.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 8.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 8.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 8.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 8.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 8.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 8.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 8.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 8.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 8.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 8.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 8.2
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 8.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 8.2
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 8.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 8.2
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 8.2
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 8.2
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 8.2
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 8.2
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 8.2
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 8.2
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 8.2
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 8.2
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 8.2
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 8.2
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 8.2
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 8.2
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 8.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 8.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 8.2
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 8.2
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 8.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 8.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 8.2
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 8.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 8.2
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.6 bits (51), Expect = 1.2
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 763 AGGGRRARSTANCHCQCRRLQIGSRPARRHDATLLY 656
AGGGRRA + R +Q G RR A ++Y
Sbjct: 584 AGGGRRAYTEEELQAALRDIQSGKLGTRR--AAVIY 617
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.0 bits (47), Expect = 3.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 788 NESIHSRDRWGREAG 744
NES+H +WG + G
Sbjct: 16 NESVHGIQKWGTQFG 30
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 159 IGPSTPFP 166
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 159 IGPSTPFP 166
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 144 IGPSTPFP 151
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 155 IGPSTPFP 162
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 155 IGPSTPFP 162
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 155 IGPSTPFP 162
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 155 IGPSTPFP 162
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 147 IGPSTPFP 154
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 147 IGPSTPFP 154
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 147 IGPSTPFP 154
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 147 IGPSTPFP 154
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 152 IGPSTPFP 159
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 153 IGPSTPFP 160
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 150 IGPSTPFP 157
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 150 IGPSTPFP 157
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 150 IGPSTPFP 157
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 150 IGPSTPFP 157
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 156 IGPSTPFP 163
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 151 IGPSTPFP 158
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 367 IGPSTPFP 374
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 378 IGPSTPFP 385
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 384 IGPSTPFP 391
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 384 IGPSTPFP 391
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 395 IGPSTPFP 402
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 8.2
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1
Query: 376 LGPSTPFP 399
+GPSTPFP
Sbjct: 380 IGPSTPFP 387
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,825
Number of Sequences: 438
Number of extensions: 4701
Number of successful extensions: 57
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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