Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10i16
         (405 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro...   214   4e-56
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro...   214   4e-56
AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p pro...   214   4e-56
AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB...   214   4e-56
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA...   214   4e-56
AY122088-1|AAM52600.1|  540|Drosophila melanogaster GH03014p pro...    27   9.5  
AE013599-491|AAG22307.1|  217|Drosophila melanogaster CG18812-PA...    27   9.5  
AE013599-490|AAG22306.1|  244|Drosophila melanogaster CG18812-PB...    27   9.5  
AE013599-489|AAG22308.2|  540|Drosophila melanogaster CG18812-PC...    27   9.5  

>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
          Length = 1227

 Score =  214 bits (522), Expect = 4e-56
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = -1

Query: 405  VVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSE 226
            + +FHVGE + SLQ+ATLIPGGSEAL+YAT+SG++G  +PFTSRED+DFFQHLEMHMR+E
Sbjct: 1102 ICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNE 1161

Query: 225  NSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVSKKLEDI 46
            N PLCGRDHLS+RS YYPVKNV+DGDLCEQ+ S++  KQK+IAGD+ RTP ++ KKLEDI
Sbjct: 1162 NPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221

Query: 45   RTRYAF 28
            RTRYAF
Sbjct: 1222 RTRYAF 1227


>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
          Length = 1227

 Score =  214 bits (522), Expect = 4e-56
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = -1

Query: 405  VVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSE 226
            + +FHVGE + SLQ+ATLIPGGSEAL+YAT+SG++G  +PFTSRED+DFFQHLEMHMR+E
Sbjct: 1102 ICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNE 1161

Query: 225  NSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVSKKLEDI 46
            N PLCGRDHLS+RS YYPVKNV+DGDLCEQ+ S++  KQK+IAGD+ RTP ++ KKLEDI
Sbjct: 1162 NPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221

Query: 45   RTRYAF 28
            RTRYAF
Sbjct: 1222 RTRYAF 1227


>AY069239-1|AAL39384.1|  688|Drosophila melanogaster GM01240p
           protein.
          Length = 688

 Score =  214 bits (522), Expect = 4e-56
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = -1

Query: 405 VVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSE 226
           + +FHVGE + SLQ+ATLIPGGSEAL+YAT+SG++G  +PFTSRED+DFFQHLEMHMR+E
Sbjct: 563 ICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNE 622

Query: 225 NSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVSKKLEDI 46
           N PLCGRDHLS+RS YYPVKNV+DGDLCEQ+ S++  KQK+IAGD+ RTP ++ KKLEDI
Sbjct: 623 NPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 682

Query: 45  RTRYAF 28
           RTRYAF
Sbjct: 683 RTRYAF 688


>AE014296-140|AAN11452.1|  688|Drosophila melanogaster CG13900-PB,
           isoform B protein.
          Length = 688

 Score =  214 bits (522), Expect = 4e-56
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = -1

Query: 405 VVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSE 226
           + +FHVGE + SLQ+ATLIPGGSEAL+YAT+SG++G  +PFTSRED+DFFQHLEMHMR+E
Sbjct: 563 ICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNE 622

Query: 225 NSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVSKKLEDI 46
           N PLCGRDHLS+RS YYPVKNV+DGDLCEQ+ S++  KQK+IAGD+ RTP ++ KKLEDI
Sbjct: 623 NPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 682

Query: 45  RTRYAF 28
           RTRYAF
Sbjct: 683 RTRYAF 688


>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
            isoform A protein.
          Length = 1227

 Score =  214 bits (522), Expect = 4e-56
 Identities = 93/126 (73%), Positives = 113/126 (89%)
 Frame = -1

Query: 405  VVNFHVGETVTSLQRATLIPGGSEALLYATISGSLGVLLPFTSREDHDFFQHLEMHMRSE 226
            + +FHVGE + SLQ+ATLIPGGSEAL+YAT+SG++G  +PFTSRED+DFFQHLEMHMR+E
Sbjct: 1102 ICSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFVPFTSREDYDFFQHLEMHMRNE 1161

Query: 225  NSPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLDPGKQKAIAGDLERTPAEVSKKLEDI 46
            N PLCGRDHLS+RS YYPVKNV+DGDLCEQ+ S++  KQK+IAGD+ RTP ++ KKLEDI
Sbjct: 1162 NPPLCGRDHLSYRSSYYPVKNVLDGDLCEQYLSIEAAKQKSIAGDMFRTPNQICKKLEDI 1221

Query: 45   RTRYAF 28
            RTRYAF
Sbjct: 1222 RTRYAF 1227


>AY122088-1|AAM52600.1|  540|Drosophila melanogaster GH03014p
           protein.
          Length = 540

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 92  IWNVLPPKYQKNLKTF 45
           +++VLP KY+KNLK F
Sbjct: 453 VYSVLPYKYKKNLKAF 468


>AE013599-491|AAG22307.1|  217|Drosophila melanogaster CG18812-PA,
           isoform A protein.
          Length = 217

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 92  IWNVLPPKYQKNLKTF 45
           +++VLP KY+KNLK F
Sbjct: 130 VYSVLPYKYKKNLKAF 145


>AE013599-490|AAG22306.1|  244|Drosophila melanogaster CG18812-PB,
           isoform B protein.
          Length = 244

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 92  IWNVLPPKYQKNLKTF 45
           +++VLP KY+KNLK F
Sbjct: 157 VYSVLPYKYKKNLKAF 172


>AE013599-489|AAG22308.2|  540|Drosophila melanogaster CG18812-PC,
           isoform C protein.
          Length = 540

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -2

Query: 92  IWNVLPPKYQKNLKTF 45
           +++VLP KY+KNLK F
Sbjct: 453 VYSVLPYKYKKNLKAF 468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,906,237
Number of Sequences: 53049
Number of extensions: 360744
Number of successful extensions: 759
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)