Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10i07
         (260 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048287-1|AAH48287.1|  760|Homo sapiens SEC63 homolog (S. cerev...    30   1.2  
BC047221-1|AAH47221.1|  760|Homo sapiens SEC63 homolog (S. cerev...    30   1.2  
AL024507-3|CAI19745.1|  760|Homo sapiens SEC63 homolog (S. cerev...    30   1.2  
AJ011779-1|CAB46275.1|  760|Homo sapiens SEC63 protein protein.        30   1.2  
AF100141-1|AAC83375.1|  760|Homo sapiens SEC63 protein.                30   1.2  
BC038515-1|AAH38515.1|  796|Homo sapiens CCDC110 protein protein.      29   2.7  
BC028419-1|AAH28419.1|  833|Homo sapiens coiled-coil domain cont...    29   2.7  
AK097605-1|BAC05116.1|  596|Homo sapiens protein ( Homo sapiens ...    29   2.7  
AB080722-1|BAC81776.1|  833|Homo sapiens hypothetical protein pr...    29   2.7  

>BC048287-1|AAH48287.1|  760|Homo sapiens SEC63 homolog (S.
           cerevisiae) protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 107 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 259
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>BC047221-1|AAH47221.1|  760|Homo sapiens SEC63 homolog (S.
           cerevisiae) protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 107 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 259
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>AL024507-3|CAI19745.1|  760|Homo sapiens SEC63 homolog (S.
           cerevisiae protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 107 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 259
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>AJ011779-1|CAB46275.1|  760|Homo sapiens SEC63 protein protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 107 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 259
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>AF100141-1|AAC83375.1|  760|Homo sapiens SEC63 protein.
          Length = 760

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +2

Query: 107 YQSLPAELLRK-RTLPRTNMAMTHSLTSLYFPGRSARDCWFLSCCVARYQSL 259
           +Q L   + RK R L  T   +TH + SLYFP    ++ W+L     + Q+L
Sbjct: 613 WQELQQSIQRKERALLETKSKITHPVYSLYFP-EEKQEWWWLYIADRKEQTL 663


>BC038515-1|AAH38515.1|  796|Homo sapiens CCDC110 protein protein.
          Length = 796

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 251 DNEQRNMIRTSSHVLNVQENIMTSNCASSPYSCEATS 141
           ++E  +++ ++S +LN  E +  S C+ + Y C A S
Sbjct: 10  EDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAES 46


>BC028419-1|AAH28419.1|  833|Homo sapiens coiled-coil domain
           containing 110 protein.
          Length = 833

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 251 DNEQRNMIRTSSHVLNVQENIMTSNCASSPYSCEATS 141
           ++E  +++ ++S +LN  E +  S C+ + Y C A S
Sbjct: 10  EDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAES 46


>AK097605-1|BAC05116.1|  596|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40286 fis, clone TESTI2027840. ).
          Length = 596

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 251 DNEQRNMIRTSSHVLNVQENIMTSNCASSPYSCEATS 141
           ++E  +++ ++S +LN  E +  S C+ + Y C A S
Sbjct: 10  EDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAES 46


>AB080722-1|BAC81776.1|  833|Homo sapiens hypothetical protein
           protein.
          Length = 833

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 251 DNEQRNMIRTSSHVLNVQENIMTSNCASSPYSCEATS 141
           ++E  +++ ++S +LN  E +  S C+ + Y C A S
Sbjct: 10  EDEVDSVLLSASKILNSSEGVKESGCSDTEYGCIAES 46


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,971,926
Number of Sequences: 237096
Number of extensions: 637113
Number of successful extensions: 2076
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2076
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)