Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10h21
(772 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-3375|AAF53985.1| 279|Drosophila melanogaster CG8674-PA... 192 6e-49
AY094758-1|AAM11111.1| 279|Drosophila melanogaster GM08665p pro... 190 1e-48
BT003576-1|AAO39580.1| 1309|Drosophila melanogaster LD40262p pro... 30 3.1
AY069600-1|AAL39745.1| 563|Drosophila melanogaster LD35343p pro... 30 3.1
AE013599-1197|AAF58732.2| 1309|Drosophila melanogaster CG30020-P... 30 3.1
X66018-1|CAA46816.1| 1742|Drosophila melanogaster projectin prot... 29 9.3
AF047475-1|AAC27550.1| 6658|Drosophila melanogaster projectin pr... 29 9.3
AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE... 29 9.3
AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC... 29 9.3
AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD... 29 9.3
AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA... 29 9.3
>AE014134-3375|AAF53985.1| 279|Drosophila melanogaster CG8674-PA
protein.
Length = 279
Score = 192 bits (467), Expect = 6e-49
Identities = 95/232 (40%), Positives = 135/232 (58%)
Frame = -2
Query: 771 AVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVEWDSQNETISQATMHLTALCN 592
+V+ D+ +EV LDHR+LKTP G V +EPLA AVA E+D+Q E I ++ MHL+ALC
Sbjct: 45 SVLSGDSGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQKENIERSRMHLSALCF 104
Query: 591 TALDNPGKLTSHDIVNYLLEYYPTDTLLFYSXXXXXXXXXXXRKWTPILDWFQKTFNVKQ 412
TA+DNP L+ D+VNYLL + TDT+LF +W P++ WF + ++
Sbjct: 105 TAIDNPNHLSKLDMVNYLLNFIATDTVLFQYDDEKDLQDLQVNEWDPVIAWFNQRYDTNL 164
Query: 411 ELANSIQPPPVFTETRAVLARHFLSYDFAALTAINFGVEALKSPILMLACMERRXXXXXX 232
+ +I PP V + + +A+HF SY L F V+ LKS +L A +E+
Sbjct: 165 QKTMNITPPQVSEQDKMNVAKHFQSYSLETLHGFIFAVDTLKSIVLACAVIEQMLTVEKA 224
Query: 231 XXXXXXXXEYQLERWGRVPWAHGLSQADLTARVSAALLLVHCATEKHAIKTK 76
EYQL+ WGRV WAH LSQ +L AR++AA+L VH ++ +K K
Sbjct: 225 VALARLEEEYQLKFWGRVEWAHDLSQQELQARLAAAVLFVHLNCSENLVKQK 276
>AY094758-1|AAM11111.1| 279|Drosophila melanogaster GM08665p
protein.
Length = 279
Score = 190 bits (464), Expect = 1e-48
Identities = 95/232 (40%), Positives = 134/232 (57%)
Frame = -2
Query: 771 AVIQNDNKWEVTLDHRRLKTPNGNVLTVGNEPLARAVAVEWDSQNETISQATMHLTALCN 592
+V D+ +EV LDHR+LKTP G V +EPLA AVA E+D+Q E I ++ MHL+ALC
Sbjct: 45 SVASGDSGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQKENIERSRMHLSALCF 104
Query: 591 TALDNPGKLTSHDIVNYLLEYYPTDTLLFYSXXXXXXXXXXXRKWTPILDWFQKTFNVKQ 412
TA+DNP L+ D+VNYLL + TDT+LF +W P++ WF + ++
Sbjct: 105 TAIDNPNHLSKLDMVNYLLNFIATDTVLFQYDDEKDLQDLQVNEWDPVIAWFNQRYDTNL 164
Query: 411 ELANSIQPPPVFTETRAVLARHFLSYDFAALTAINFGVEALKSPILMLACMERRXXXXXX 232
+ +I PP V + + +A+HF SY L F V+ LKS +L A +E+
Sbjct: 165 QKTMNITPPQVSEQDKMNVAKHFQSYSLETLHGFIFAVDTLKSIVLACAVIEQMLTVEKA 224
Query: 231 XXXXXXXXEYQLERWGRVPWAHGLSQADLTARVSAALLLVHCATEKHAIKTK 76
EYQL+ WGRV WAH LSQ +L AR++AA+L VH ++ +K K
Sbjct: 225 VALARLEEEYQLKFWGRVEWAHDLSQQELQARLAAAVLFVHLNCSENLVKQK 276
>BT003576-1|AAO39580.1| 1309|Drosophila melanogaster LD40262p protein.
Length = 1309
Score = 30.3 bits (65), Expect = 3.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 639 NETISQATMHLTALCNTALDNPGKLTSHDI 550
N + ++++H+ LCN D GKL H++
Sbjct: 1078 NSRLHRSSIHICKLCNQTFDELGKLVKHEM 1107
>AY069600-1|AAL39745.1| 563|Drosophila melanogaster LD35343p
protein.
Length = 563
Score = 30.3 bits (65), Expect = 3.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 639 NETISQATMHLTALCNTALDNPGKLTSHDI 550
N + ++++H+ LCN D GKL H++
Sbjct: 332 NSRLHRSSIHICKLCNQTFDELGKLVKHEM 361
>AE013599-1197|AAF58732.2| 1309|Drosophila melanogaster CG30020-PA
protein.
Length = 1309
Score = 30.3 bits (65), Expect = 3.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 639 NETISQATMHLTALCNTALDNPGKLTSHDI 550
N + ++++H+ LCN D GKL H++
Sbjct: 1078 NSRLHRSSIHICKLCNQTFDELGKLVKHEM 1107
>X66018-1|CAA46816.1| 1742|Drosophila melanogaster projectin protein.
Length = 1742
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 476 IFKKENGHQYWTGFKRHLMSNRN 408
I KKE G YWT RH+ SN+N
Sbjct: 1439 IQKKEKGSPYWTNV-RHVPSNKN 1460
>AF047475-1|AAC27550.1| 6658|Drosophila melanogaster projectin
protein.
Length = 6658
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 476 IFKKENGHQYWTGFKRHLMSNRN 408
I KKE G YWT RH+ SN+N
Sbjct: 3527 IQKKEKGSPYWTNV-RHVPSNKN 3548
>AE014135-137|AAS64601.1| 8647|Drosophila melanogaster CG32019-PE,
isoform E protein.
Length = 8647
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 476 IFKKENGHQYWTGFKRHLMSNRN 408
I KKE G YWT RH+ SN+N
Sbjct: 5514 IQKKEKGSPYWTNV-RHVPSNKN 5535
>AE014135-136|AAS64600.1| 8648|Drosophila melanogaster CG32019-PC,
isoform C protein.
Length = 8648
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 476 IFKKENGHQYWTGFKRHLMSNRN 408
I KKE G YWT RH+ SN+N
Sbjct: 5515 IQKKEKGSPYWTNV-RHVPSNKN 5536
>AE014135-135|AAS64599.1| 8930|Drosophila melanogaster CG32019-PD,
isoform D protein.
Length = 8930
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 476 IFKKENGHQYWTGFKRHLMSNRN 408
I KKE G YWT RH+ SN+N
Sbjct: 5797 IQKKEKGSPYWTNV-RHVPSNKN 5818
>AE014135-134|AAF59316.4| 8943|Drosophila melanogaster CG32019-PA,
isoform A protein.
Length = 8943
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 476 IFKKENGHQYWTGFKRHLMSNRN 408
I KKE G YWT RH+ SN+N
Sbjct: 5810 IQKKEKGSPYWTNV-RHVPSNKN 5831
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,368,630
Number of Sequences: 53049
Number of extensions: 719713
Number of successful extensions: 2047
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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