Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10h16
(742 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 27 0.24
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 24 1.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 24 1.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 4.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 4.0
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 22 5.3
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 22 5.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 5.3
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 5.3
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 22 7.0
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 22 7.0
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 7.0
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 7.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.2
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 26.6 bits (56), Expect = 0.24
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 34 DYLINTAPKMTNKEHNNLFIFAEQQCPLRTVRNIAP 141
D ++ + K N + NN+ + +Q+ PLR I P
Sbjct: 510 DQPLDLSAKPKNSQDNNISLLEQQKIPLRMTAGIDP 545
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 24.2 bits (50), Expect = 1.3
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Frame = -1
Query: 637 NDSGMSSVDSNESLKNNLINKNVSENLCSTSNNDCEVKTKCLTNESQRDVRWNEIPSCST 458
N++ + D + +KNN ++ V N N+ E KC E N + +
Sbjct: 202 NNNDATPTDFSMGVKNNHVSSKVEGNGVHEENSPLEDNIKCEPLELTGGNSGNAAGN-NE 260
Query: 457 DFNDSNVLENEN--EKTLSNVSDGADSENNLPEFI 359
D +DS ++ SN + + P F+
Sbjct: 261 DSSDSGAAASDRPPASASSNEHEAESEHTSTPNFL 295
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/67 (17%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 595 KNNLINKNVSENL-CSTSNNDCEVKTKCLTNESQRDVRWNEIPSCSTDFNDSNVLENENE 419
+N + K+++ + CST + E++ K N V + + + D+N + +++
Sbjct: 951 QNKAVKKHITTTIDCSTQSEYYELEVKDQKNGKPPSVVSRSTQTSANNDKDTNAVVTQSK 1010
Query: 418 KTLSNVS 398
+ N++
Sbjct: 1011 EARDNIT 1017
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 4.0
Identities = 15/83 (18%), Positives = 33/83 (39%)
Frame = -1
Query: 622 SSVDSNESLKNNLINKNVSENLCSTSNNDCEVKTKCLTNESQRDVRWNEIPSCSTDFNDS 443
S+ + N K I+ + C+ + V C N + + + +++ N++
Sbjct: 184 SNENYNWEHKETHIDWQPEDEECTEATAGAVVLETCQRNSNNSTITAGNANTNASNNNNN 243
Query: 442 NVLENENEKTLSNVSDGADSENN 374
N N N ++ +G + NN
Sbjct: 244 NNNNNNNNNGANDNGNGNGASNN 266
Score = 22.6 bits (46), Expect = 4.0
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -1
Query: 703 IVIENKTNNNECLPEEIDVVEDNDSGMSSVDSNESLKNNLINKNVSENLCSTSNND 536
+V+E N+ N S ++ ++N + NN N N + N S +NN+
Sbjct: 214 VVLETCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNNN 269
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 715 KTKVIVIENKTNNNECLPEEIDVVEDN 635
K +I +N ++ EC +E ++++DN
Sbjct: 191 KDNLIPDKNDPDSKECSNQEYEIMKDN 217
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 22.2 bits (45), Expect = 5.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 129 KHRTACSNAASSIDRDKLSNFSFSVLAISLF 221
+ RT N+ S IDR F LAI++F
Sbjct: 411 RRRTPRYNSVSKIDRASRIVFPLFFLAINVF 441
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 340 DVNDNKLSDDDSNV 299
DVND K++ +D NV
Sbjct: 46 DVNDGKINIEDENV 59
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -1
Query: 718 GKTKVIVIENKTNNNECLPEEIDVVEDNDSGMSSVDSNESLKNNLINKNVSE 563
GK+ + +E K + PE++ ++ G + E +KN L N E
Sbjct: 130 GKSTITTVEVKRDIIN--PEDVILIRRTGEGSKPIFEREEIKNVLTKINKIE 179
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -1
Query: 718 GKTKVIVIENKTNNNECLPEEIDVVEDNDSGMSSVDSNESLKNNLINKNVSE 563
GK+ + +E K + PE++ ++ G + E +KN L N E
Sbjct: 141 GKSTITTVEVKRDIIN--PEDVILIRRTGEGSKPIFEREEIKNVLTKINKIE 190
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.3
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = -1
Query: 718 GKTKVIVIENKTNNNECLPEEIDVVEDNDSGMSSVDSNESLKNNLINKNVSE 563
GK+ +E K + PE++ ++ G + E +KN L N E
Sbjct: 141 GKSTTTTVEVKRDTIN--PEDVILIRRTGEGSKPIFEREEIKNVLTKINKIE 190
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 5.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = -3
Query: 176 VSVDTACRVAAGGAMFRTVLRGHCCSAKINKLLCSLFVIFGAVLIK 39
+S R++ + R +LRG C S++ N + FGA+ ++
Sbjct: 28 ISAGCVSRISNRISRNRVLLRGQCISSRRNGRHNVHSLAFGAIQLR 73
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 129 KHRTACSNAASSIDRDKLSNFSF 197
++ T C A++I DK+S F F
Sbjct: 345 QYDTCCQGRATAIYIDKVSRFFF 367
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 340 DVNDNKLSDDDSNV 299
D+N+ K++ DD NV
Sbjct: 46 DINEGKINMDDENV 59
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 436 LENENEKTLSNVSDGADSENNLPE 365
+E E E + ++VS G+D EN+ E
Sbjct: 296 IEPEIEISQNSVSTGSDKENHKTE 319
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 682 NNNECLPEEIDVVEDNDSGMSSVD 611
NN E EID N+ G+ S+D
Sbjct: 467 NNCEIKAGEIDAERLNNQGIESID 490
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.2
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -1
Query: 718 GKTKVIVIENKTNNNECLPEEIDVVEDNDSGMSSVDSNESLKNNLINKNVSE 563
GK+ +E K + PE++ V+ G + E +KN L N E
Sbjct: 130 GKSTTTTVEVKRDIIN--PEDVIVIRRTGEGSKPLFEREEIKNVLTKINKIE 179
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.2
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -1
Query: 718 GKTKVIVIENKTNNNECLPEEIDVVEDNDSGMSSVDSNESLKNNLINKNVSE 563
GK+ +E K + PE++ V+ G + E +KN L N E
Sbjct: 141 GKSTTTTVEVKRDIIN--PEDVIVIRRTGEGSKPLFEREEIKNVLTKINKIE 190
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.2
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -1
Query: 718 GKTKVIVIENKTNNNECLPEEIDVVEDNDSGMSSVDSNESLKNNLINKNVSE 563
GK+ +E K + PE++ V+ G + E +KN L N E
Sbjct: 141 GKSTTTTVEVKRDIIN--PEDVIVIRRTGEGSKPLFEREEIKNVLTKINKIE 190
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.2
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -1
Query: 718 GKTKVIVIENKTNNNECLPEEIDVVEDNDSGMSSVDSNESLKNNLINKNVSE 563
GK+ +E K + PE++ V+ G + E +KN L N E
Sbjct: 130 GKSTTTTVEVKRDIIN--PEDVIVIRRTGEGSKPLFEREEIKNVLTKINKIE 179
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,368
Number of Sequences: 438
Number of extensions: 3129
Number of successful extensions: 51
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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