Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10h05
         (316 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26 pro...   137   6e-33
L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26 pro...   137   6e-33
CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.               137   6e-33
BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.       137   6e-33
AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26 p...   137   6e-33
BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-l...   137   7e-33
BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-l...   137   7e-33
AK124563-1|BAC85887.1|  122|Homo sapiens protein ( Homo sapiens ...    28   5.0  
AK091754-1|BAC03740.1|  213|Homo sapiens protein ( Homo sapiens ...    27   8.8  

>X69392-1|CAA49189.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  137 bits (332), Expect = 6e-33
 Identities = 67/96 (69%), Positives = 75/96 (78%)
 Frame = -2

Query: 288 MKFNKQVTXXXXXXXXRHFSAPSHIXRVLMSSPPSKXLRQXFXVXSMPIRKDDEVQVVRG 109
           MKFN  VT        RHF+APSHI R +MSSP SK LRQ + V SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 108 XYKGQQVGKVMQVYRKKXVVYIERIQREKANGATAY 1
            YKGQQ+GKV+QVYRKK V+YIER+QREKANG T +
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVH 96


>L07287-1|AAA60279.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  137 bits (332), Expect = 6e-33
 Identities = 67/96 (69%), Positives = 75/96 (78%)
 Frame = -2

Query: 288 MKFNKQVTXXXXXXXXRHFSAPSHIXRVLMSSPPSKXLRQXFXVXSMPIRKDDEVQVVRG 109
           MKFN  VT        RHF+APSHI R +MSSP SK LRQ + V SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 108 XYKGQQVGKVMQVYRKKXVVYIERIQREKANGATAY 1
            YKGQQ+GKV+QVYRKK V+YIER+QREKANG T +
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVH 96


>CR456828-1|CAG33109.1|  145|Homo sapiens RPL26 protein.
          Length = 145

 Score =  137 bits (332), Expect = 6e-33
 Identities = 67/96 (69%), Positives = 75/96 (78%)
 Frame = -2

Query: 288 MKFNKQVTXXXXXXXXRHFSAPSHIXRVLMSSPPSKXLRQXFXVXSMPIRKDDEVQVVRG 109
           MKFN  VT        RHF+APSHI R +MSSP SK LRQ + V SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 108 XYKGQQVGKVMQVYRKKXVVYIERIQREKANGATAY 1
            YKGQQ+GKV+QVYRKK V+YIER+QREKANG T +
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVH 96


>BC071664-1|AAH71664.1|  145|Homo sapiens RPL26 protein protein.
          Length = 145

 Score =  137 bits (332), Expect = 6e-33
 Identities = 67/96 (69%), Positives = 75/96 (78%)
 Frame = -2

Query: 288 MKFNKQVTXXXXXXXXRHFSAPSHIXRVLMSSPPSKXLRQXFXVXSMPIRKDDEVQVVRG 109
           MKFN  VT        RHF+APSHI R +MSSP SK LRQ + V SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 108 XYKGQQVGKVMQVYRKKXVVYIERIQREKANGATAY 1
            YKGQQ+GKV+QVYRKK V+YIER+QREKANG T +
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVH 96


>AB061829-1|BAB79467.1|  145|Homo sapiens ribosomal protein L26
           protein.
          Length = 145

 Score =  137 bits (332), Expect = 6e-33
 Identities = 67/96 (69%), Positives = 75/96 (78%)
 Frame = -2

Query: 288 MKFNKQVTXXXXXXXXRHFSAPSHIXRVLMSSPPSKXLRQXFXVXSMPIRKDDEVQVVRG 109
           MKFN  VT        RHF+APSHI R +MSSP SK LRQ + V SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 108 XYKGQQVGKVMQVYRKKXVVYIERIQREKANGATAY 1
            YKGQQ+GKV+QVYRKK V+YIER+QREKANG T +
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVH 96


>BC070192-1|AAH70192.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  137 bits (331), Expect = 7e-33
 Identities = 66/96 (68%), Positives = 75/96 (78%)
 Frame = -2

Query: 288 MKFNKQVTXXXXXXXXRHFSAPSHIXRVLMSSPPSKXLRQXFXVXSMPIRKDDEVQVVRG 109
           MKFN  VT        RHF+APSH+ R +MSSP SK LRQ + V SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 108 XYKGQQVGKVMQVYRKKXVVYIERIQREKANGATAY 1
            YKGQQ+GKV+QVYRKK V+YIER+QREKANG T +
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVH 96


>BC017360-1|AAH17360.1|  145|Homo sapiens ribosomal protein L26-like
           1 protein.
          Length = 145

 Score =  137 bits (331), Expect = 7e-33
 Identities = 66/96 (68%), Positives = 75/96 (78%)
 Frame = -2

Query: 288 MKFNKQVTXXXXXXXXRHFSAPSHIXRVLMSSPPSKXLRQXFXVXSMPIRKDDEVQVVRG 109
           MKFN  VT        RHF+APSH+ R +MSSP SK LRQ + V SMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 108 XYKGQQVGKVMQVYRKKXVVYIERIQREKANGATAY 1
            YKGQQ+GKV+QVYRKK V+YIER+QREKANG T +
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVH 96


>AK124563-1|BAC85887.1|  122|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42572 fis, clone BRACE3008092. ).
          Length = 122

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 59  FLRYTCITLPTCWPLXCP 112
           F R++C++LP+ W   CP
Sbjct: 55  FKRFSCLSLPSSWDYRCP 72


>AK091754-1|BAC03740.1|  213|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34435 fis, clone HLUNG2000955. ).
          Length = 213

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 59  FLRYTCITLPTCWPLXCP 112
           F R++C+ LP+ W   CP
Sbjct: 185 FKRFSCLILPSSWDYRCP 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,665,865
Number of Sequences: 237096
Number of extensions: 436736
Number of successful extensions: 716
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)