Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10g24
(817 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089645-1|AAL90383.1| 336|Drosophila melanogaster RE72132p pro... 47 3e-05
AE014134-742|AAF51009.2| 336|Drosophila melanogaster CG15440-PA... 47 3e-05
AE014134-2883|AAZ66476.1| 3101|Drosophila melanogaster CG7100-PL... 30 3.3
AE014134-2882|AAZ66475.1| 3100|Drosophila melanogaster CG7100-PK... 30 3.3
AE014134-2881|AAZ66474.1| 3100|Drosophila melanogaster CG7100-PI... 30 3.3
AE014134-2880|AAZ66473.1| 3099|Drosophila melanogaster CG7100-PJ... 30 3.3
AE014134-2879|AAN10998.1| 3097|Drosophila melanogaster CG7100-PE... 30 3.3
AE014134-2878|AAN10997.1| 3096|Drosophila melanogaster CG7100-PG... 30 3.3
AE014134-2877|AAN10996.1| 3096|Drosophila melanogaster CG7100-PA... 30 3.3
AE014134-2876|AAN10995.1| 3095|Drosophila melanogaster CG7100-PC... 30 3.3
AE014134-2875|AAF53635.1| 3097|Drosophila melanogaster CG7100-PD... 30 3.3
AE014134-2874|AAN10994.1| 3096|Drosophila melanogaster CG7100-PF... 30 3.3
AE014134-2873|AAN10993.1| 3096|Drosophila melanogaster CG7100-PB... 30 3.3
AE014134-2872|AAN10992.1| 3095|Drosophila melanogaster CG7100-PH... 30 3.3
AB002397-1|BAA22151.1| 3097|Drosophila melanogaster DN-cadherin ... 30 3.3
>AY089645-1|AAL90383.1| 336|Drosophila melanogaster RE72132p
protein.
Length = 336
Score = 47.2 bits (107), Expect = 3e-05
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = -2
Query: 768 DYNQYYDP-SAYWQNYSAWSGYYGQ 697
DY+QYYDP S YWQ Y AW GYY Q
Sbjct: 209 DYSQYYDPTSTYWQGYQAWQGYYEQ 233
Score = 39.5 bits (88), Expect = 0.005
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -1
Query: 148 DHKKPIDVDHMNNEFLDVNISLWDSLEGSQWFP 50
+HK +DVD +N E +D + L+D+LE S+W P
Sbjct: 297 EHKFVLDVDKLNREAIDADRRLYDALESSKWLP 329
>AE014134-742|AAF51009.2| 336|Drosophila melanogaster CG15440-PA
protein.
Length = 336
Score = 47.2 bits (107), Expect = 3e-05
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = -2
Query: 768 DYNQYYDP-SAYWQNYSAWSGYYGQ 697
DY+QYYDP S YWQ Y AW GYY Q
Sbjct: 209 DYSQYYDPTSTYWQGYQAWQGYYEQ 233
Score = 39.5 bits (88), Expect = 0.005
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = -1
Query: 148 DHKKPIDVDHMNNEFLDVNISLWDSLEGSQWFP 50
+HK +DVD +N E +D + L+D+LE S+W P
Sbjct: 297 EHKFVLDVDKLNREAIDADRRLYDALESSKWLP 329
>AE014134-2883|AAZ66476.1| 3101|Drosophila melanogaster CG7100-PL,
isoform L protein.
Length = 3101
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2368 PHCSCPVGYTGPRCQQTTRSFRGNGW 2393
>AE014134-2882|AAZ66475.1| 3100|Drosophila melanogaster CG7100-PK,
isoform K protein.
Length = 3100
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2368 PHCSCPVGYTGPRCQQTTRSFRGNGW 2393
>AE014134-2881|AAZ66474.1| 3100|Drosophila melanogaster CG7100-PI,
isoform I protein.
Length = 3100
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2367 PHCSCPVGYTGPRCQQTTRSFRGNGW 2392
>AE014134-2880|AAZ66473.1| 3099|Drosophila melanogaster CG7100-PJ,
isoform J protein.
Length = 3099
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2367 PHCSCPVGYTGPRCQQTTRSFRGNGW 2392
>AE014134-2879|AAN10998.1| 3097|Drosophila melanogaster CG7100-PE,
isoform E protein.
Length = 3097
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2364 PHCSCPVGYTGPRCQQTTRSFRGNGW 2389
>AE014134-2878|AAN10997.1| 3096|Drosophila melanogaster CG7100-PG,
isoform G protein.
Length = 3096
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2364 PHCSCPVGYTGPRCQQTTRSFRGNGW 2389
>AE014134-2877|AAN10996.1| 3096|Drosophila melanogaster CG7100-PA,
isoform A protein.
Length = 3096
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2363 PHCSCPVGYTGPRCQQTTRSFRGNGW 2388
>AE014134-2876|AAN10995.1| 3095|Drosophila melanogaster CG7100-PC,
isoform C protein.
Length = 3095
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2363 PHCSCPVGYTGPRCQQTTRSFRGNGW 2388
>AE014134-2875|AAF53635.1| 3097|Drosophila melanogaster CG7100-PD,
isoform D protein.
Length = 3097
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2364 PHCSCPVGYTGPRCQQTTRSFRGNGW 2389
>AE014134-2874|AAN10994.1| 3096|Drosophila melanogaster CG7100-PF,
isoform F protein.
Length = 3096
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2364 PHCSCPVGYTGPRCQQTTRSFRGNGW 2389
>AE014134-2873|AAN10993.1| 3096|Drosophila melanogaster CG7100-PB,
isoform B protein.
Length = 3096
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2363 PHCSCPVGYTGPRCQQTTRSFRGNGW 2388
>AE014134-2872|AAN10992.1| 3095|Drosophila melanogaster CG7100-PH,
isoform H protein.
Length = 3095
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2363 PHCSCPVGYTGPRCQQTTRSFRGNGW 2388
>AB002397-1|BAA22151.1| 3097|Drosophila melanogaster DN-cadherin
protein.
Length = 3097
Score = 30.3 bits (65), Expect = 3.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 670 PTCSCI*NYTSCRCQNTNR*F-GSRW 596
P CSC YT RCQ T R F G+ W
Sbjct: 2364 PHCSCPVGYTGPRCQQTTRSFRGNGW 2389
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,128,027
Number of Sequences: 53049
Number of extensions: 591743
Number of successful extensions: 1401
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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