Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10g16
         (807 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y07908-1|CAA69216.1|  752|Drosophila melanogaster serine/threoni...    30   4.3  
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro...    29   9.9  
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    29   9.9  

>Y07908-1|CAA69216.1|  752|Drosophila melanogaster serine/threonine
           protein kinase protein.
          Length = 752

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 570 CCSGHHHTLQTFHREVAKPTEVIINFRH-FGMGVTDSQQQTKPTDKTPDQEK 418
           C   H+ +LQ +  ++ + TE++   RH    G    QQQ +P  +   Q++
Sbjct: 89  CRMLHNCSLQQYQNDIRQQTEILDMLRHEHQQGYQSQQQQQQPQQQQEQQQQ 140


>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p
           protein.
          Length = 1870

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 397 ECDPEHYFFLIRSFVGRFCLLLTICDTH 480
           ECDP     LIR+  GRF   +TIC+ H
Sbjct: 197 ECDPGDVINLIRANYGRFS--ITICNDH 222


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
           protein.
          Length = 1711

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +1

Query: 397 ECDPEHYFFLIRSFVGRFCLLLTICDTH 480
           ECDP     LIR+  GRF   +TIC+ H
Sbjct: 34  ECDPGDVINLIRANYGRFS--ITICNDH 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,285,960
Number of Sequences: 53049
Number of extensions: 697731
Number of successful extensions: 1587
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1587
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3777934368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)