Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10g13
(325 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111940-1|AAI11941.1| 663|Homo sapiens Rho GTPase activating p... 28 5.6
BC107416-1|AAI07417.1| 663|Homo sapiens Rho GTPase activating p... 28 5.6
BC101708-1|AAI01709.1| 663|Homo sapiens Rho GTPase activating p... 28 5.6
BC070052-1|AAH70052.1| 646|Homo sapiens WEE1 homolog (S. pombe)... 28 5.6
BC062417-1|AAH62417.1| 470|Homo sapiens ARHGAP18 protein protein. 28 5.6
BC039611-1|AAH39611.1| 472|Homo sapiens ARHGAP18 protein protein. 28 5.6
BC017223-1|AAH17223.1| 428|Homo sapiens ARHGAP18 protein protein. 28 5.6
AL451139-17|CAI15850.2| 725|Homo sapiens absent in melanoma 1-l... 28 5.6
AL450310-1|CAH72298.1| 618|Homo sapiens Rho GTPase activating p... 28 5.6
AK095339-1|BAC04533.1| 616|Homo sapiens protein ( Homo sapiens ... 28 5.6
AB053293-1|BAB61887.1| 618|Homo sapiens MacGAP protein. 28 5.6
X62048-1|CAA43979.1| 646|Homo sapiens Wee1 Hu protein. 27 9.8
U10564-1|AAB60401.1| 646|Homo sapiens WEE1Hu CDK tyrosine 15-ki... 27 9.8
BX641032-1|CAE46020.1| 190|Homo sapiens hypothetical protein pr... 27 9.8
BC051831-1|AAH51831.1| 646|Homo sapiens WEE1 homolog (S. pombe)... 27 9.8
AJ277546-2|CAC14173.1| 646|Homo sapiens WEE1 protein protein. 27 9.8
>BC111940-1|AAI11941.1| 663|Homo sapiens Rho GTPase activating
protein 18 protein.
Length = 663
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 233 EAFPASEGLRRRPTNLRAAALRMNVLPDRNRDPLR 129
+AF A + L + L+A L + +LPD NRD L+
Sbjct: 421 KAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLK 455
>BC107416-1|AAI07417.1| 663|Homo sapiens Rho GTPase activating
protein 18 protein.
Length = 663
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 233 EAFPASEGLRRRPTNLRAAALRMNVLPDRNRDPLR 129
+AF A + L + L+A L + +LPD NRD L+
Sbjct: 421 KAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLK 455
>BC101708-1|AAI01709.1| 663|Homo sapiens Rho GTPase activating
protein 18 protein.
Length = 663
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 233 EAFPASEGLRRRPTNLRAAALRMNVLPDRNRDPLR 129
+AF A + L + L+A L + +LPD NRD L+
Sbjct: 421 KAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLK 455
>BC070052-1|AAH70052.1| 646|Homo sapiens WEE1 homolog (S. pombe)
protein.
Length = 646
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 13 SNIRSRKGSRQSYSSNSAKREFDVQ--PNLNTSPVSFSSDLLSGS 141
S+++ R S + + S KREFDV+ P +N +P + S LL S
Sbjct: 204 SSVKLRGSSLFTDTEKSGKREFDVRQTPQVNINPFTPDSLLLHSS 248
>BC062417-1|AAH62417.1| 470|Homo sapiens ARHGAP18 protein protein.
Length = 470
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 233 EAFPASEGLRRRPTNLRAAALRMNVLPDRNRDPLR 129
+AF A + L + L+A L + +LPD NRD L+
Sbjct: 420 KAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLK 454
>BC039611-1|AAH39611.1| 472|Homo sapiens ARHGAP18 protein protein.
Length = 472
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 233 EAFPASEGLRRRPTNLRAAALRMNVLPDRNRDPLR 129
+AF A + L + L+A L + +LPD NRD L+
Sbjct: 421 KAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLK 455
>BC017223-1|AAH17223.1| 428|Homo sapiens ARHGAP18 protein protein.
Length = 428
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 233 EAFPASEGLRRRPTNLRAAALRMNVLPDRNRDPLR 129
+AF A + L + L+A L + +LPD NRD L+
Sbjct: 376 KAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLK 410
>AL451139-17|CAI15850.2| 725|Homo sapiens absent in melanoma 1-like
protein.
Length = 725
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 249 TYWWPGGLSGLRRPPKETY*PESSCFADECTTGSESRPAEKIR 121
T W P G+ LRR + PE S F++E G + + E ++
Sbjct: 117 TKWSPQGIGSLRRVVWDYSTPEISLFSEEGLKGEQVKLTEALK 159
>AL450310-1|CAH72298.1| 618|Homo sapiens Rho GTPase activating
protein 18 protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 233 EAFPASEGLRRRPTNLRAAALRMNVLPDRNRDPLR 129
+AF A + L + L+A L + +LPD NRD L+
Sbjct: 376 KAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLK 410
>AK095339-1|BAC04533.1| 616|Homo sapiens protein ( Homo sapiens
cDNA FLJ38020 fis, clone CTONG2012843, weakly similar to
Human non-lens beta gamma-crystallin like protein (AIM1)
mRNA. ).
Length = 616
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 249 TYWWPGGLSGLRRPPKETY*PESSCFADECTTGSESRPAEKIR 121
T W P G+ LRR + PE S F++E G + + E ++
Sbjct: 8 TKWSPQGIGSLRRVVWDYSTPEISLFSEEGLKGEQVKLTEALK 50
>AB053293-1|BAB61887.1| 618|Homo sapiens MacGAP protein.
Length = 618
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3
Query: 233 EAFPASEGLRRRPTNLRAAALRMNVLPDRNRDPLR 129
+AF A + L + L+A L + +LPD NRD L+
Sbjct: 376 KAFQAVQNLPTKKQQLQALNLLVILLPDANRDTLK 410
>X62048-1|CAA43979.1| 646|Homo sapiens Wee1 Hu protein.
Length = 646
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 13 SNIRSRKGSRQSYSSNSAKREFDVQ--PNLNTSPVSFSSDLLSGS 141
S+++ R S + S KREFDV+ P +N +P + S LL S
Sbjct: 204 SSVKLRGSSLFMDTEKSGKREFDVRQTPQVNINPFTPDSLLLHSS 248
>U10564-1|AAB60401.1| 646|Homo sapiens WEE1Hu CDK tyrosine
15-kinase protein.
Length = 646
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 13 SNIRSRKGSRQSYSSNSAKREFDVQ--PNLNTSPVSFSSDLLSGS 141
S+++ R S + S KREFDV+ P +N +P + S LL S
Sbjct: 204 SSVKLRGSSLFMDTEKSGKREFDVRQTPQVNINPFTPDSLLLHSS 248
>BX641032-1|CAE46020.1| 190|Homo sapiens hypothetical protein
protein.
Length = 190
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 13 SNIRSRKGSRQSYSSNSAKREFDVQ--PNLNTSPVSFSSDLLSGS 141
S+++ R S + S KREFDV+ P +N +P + S LL S
Sbjct: 12 SSVKLRGSSLFMDTEKSGKREFDVRQTPQVNINPFTPDSLLLHSS 56
>BC051831-1|AAH51831.1| 646|Homo sapiens WEE1 homolog (S. pombe)
protein.
Length = 646
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 13 SNIRSRKGSRQSYSSNSAKREFDVQ--PNLNTSPVSFSSDLLSGS 141
S+++ R S + S KREFDV+ P +N +P + S LL S
Sbjct: 204 SSVKLRGSSLFMDTEKSGKREFDVRQTPQVNINPFTPDSLLLHSS 248
>AJ277546-2|CAC14173.1| 646|Homo sapiens WEE1 protein protein.
Length = 646
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 13 SNIRSRKGSRQSYSSNSAKREFDVQ--PNLNTSPVSFSSDLLSGS 141
S+++ R S + S KREFDV+ P +N +P + S LL S
Sbjct: 204 SSVKLRGSSLFMDTEKSGKREFDVRQTPQVNINPFTPDSLLLHSS 248
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.313 0.125 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,577,509
Number of Sequences: 237096
Number of extensions: 799789
Number of successful extensions: 1302
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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