Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10g11
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0539 - 19237573-19239169,19239258-19239410,19239505-192395... 363 e-101
02_02_0572 + 11667455-11670783,11672026-11672419 234 8e-62
06_02_0263 - 13566621-13569875 223 2e-58
05_04_0174 - 18728199-18731411 186 2e-47
03_02_0789 + 11207769-11208059,11208370-11208557,11208701-112097... 180 1e-45
06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,467... 162 4e-40
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 160 1e-39
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 85 7e-17
03_05_1133 - 30614901-30615389,30615823-30615933,30616113-306161... 79 5e-15
11_03_0216 + 11821726-11821860,11823217-11823286,11823704-118238... 79 6e-15
07_03_1304 - 25629822-25629839,25630091-25631148,25631784-256349... 79 6e-15
01_01_0788 + 6111890-6112002,6112121-6112265,6113012-6113086,611... 63 3e-10
04_03_0985 - 21438036-21438116,21438373-21438495,21438903-214389... 56 3e-08
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 55 7e-08
02_05_0672 + 30775458-30775523,30775594-30775662,30775748-307757... 42 9e-04
08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204 33 0.31
09_04_0686 + 19457832-19457870,19458021-19458107,19459311-194593... 31 1.6
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 31 1.6
10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393 30 2.9
04_03_0455 - 16085401-16085775 29 3.8
04_04_1607 + 34750114-34750193,34750472-34750622,34750730-347507... 29 5.0
03_02_1021 + 13254765-13255092,13255201-13255355 29 5.0
11_06_0374 + 22877325-22878500,22879898-22880014,22880131-228803... 29 6.6
04_03_0229 - 13006869-13007017,13007925-13008089,13008178-130083... 29 6.6
01_05_0648 + 23915469-23915898,23916551-23916619,23916956-239173... 29 6.6
12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307... 28 8.7
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 28 8.7
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 28 8.7
04_04_0433 + 25163111-25163471,25163943-25164154,25164420-251647... 28 8.7
03_05_0100 - 20779387-20779641,20779824-20780629,20780757-207810... 28 8.7
03_03_0166 - 15027065-15028465 28 8.7
02_05_0880 + 32466538-32467083,32467333-32467644,32467731-324682... 28 8.7
02_03_0246 - 16807619-16808145,16808208-16808868 28 8.7
>07_03_0539 - 19237573-19239169,19239258-19239410,19239505-19239566,
19239855-19240103,19240248-19240337,19240453-19240632,
19240713-19240942,19241558-19241735,19242327-19242432,
19242786-19242883,19243683-19243813,19243908-19244087,
19244179-19244443,19244557-19244627,19244707-19244922,
19245147-19245294
Length = 1317
Score = 363 bits (894), Expect = e-101
Identities = 171/301 (56%), Positives = 208/301 (69%), Gaps = 7/301 (2%)
Frame = -3
Query: 891 MYQLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSV 712
MYQLW+LGAL+ G+LT +G +M EFPLDP ML++ + C EVL IVSMLSVPSV
Sbjct: 1017 MYQLWVLGALNNVGALTVIGWKMVEFPLDPTLAKMLLMGEQLECLDEVLTIVSMLSVPSV 1076
Query: 711 FYRPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVRE 532
F+RP+ R EE+DA +EKF VPESDHLTLL++Y QWKSN Y WC +HF+H K +RK RE
Sbjct: 1077 FFRPKDRAEESDAAREKFFVPESDHLTLLNVYLQWKSNQYRGDWCNDHFLHVKGLRKARE 1136
Query: 531 VRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHP 352
VR QL DIL+ ++PL SC +WD VRK ICSAYF AARLKG+GEYVNCR GMPCHLHP
Sbjct: 1137 VRSQLLDILKTLKIPLTSCHMEWDVVRKAICSAYFHNAARLKGVGEYVNCRNGMPCHLHP 1196
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKS-----N 187
+SAL+GLG +PDYVVYHEL +T +EYM CVTAVD +WLAELGPMFFSVKET S
Sbjct: 1197 SSALYGLGYTPDYVVYHELVLTTKEYMQCVTAVDPQWLAELGPMFFSVKETDTSLLDHKK 1256
Query: 186 RDKRKEAAVHLQXXXXXXXXXXXXXXXXXXXXXXDVPVKQEVATPGL--GTPRRTPQRLG 13
R K + A+ + +Q+V+ PGL G+ P+R+G
Sbjct: 1257 RQKEDKTAMEEEMEKLRQEQAEAARLEKEREREKRAKQQQQVSMPGLKKGSTYLRPKRMG 1316
Query: 12 L 10
L
Sbjct: 1317 L 1317
>02_02_0572 + 11667455-11670783,11672026-11672419
Length = 1240
Score = 234 bits (572), Expect = 8e-62
Identities = 108/241 (44%), Positives = 158/241 (65%)
Frame = -3
Query: 891 MYQLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSV 712
M QL+ LGALD G LT LGR+MAEFPLDP ML+ + D+GCS E+L I++M+ ++
Sbjct: 980 MEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNI 1039
Query: 711 FYRPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVRE 532
FYRP+ ++ +AD + KF PE DHLTLL +Y WK+ N+S WC E+FV ++++R+ ++
Sbjct: 1040 FYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQD 1099
Query: 531 VRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHP 352
VR+QL I+ + +L +VS G ++ +RK I + +F AAR Y P ++HP
Sbjct: 1100 VRKQLLTIMDRYKLDVVSAGRNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHP 1159
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDKRK 172
+SALF PD+V+YHEL MT +EYM VT +D +WL EL P F+ + K ++ KR+
Sbjct: 1160 SSALFQR--QPDWVIYHELVMTTKEYMREVTVIDPKWLTELAPRFYKSADPTKMSKRKRQ 1217
Query: 171 E 169
E
Sbjct: 1218 E 1218
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 223 bits (544), Expect = 2e-58
Identities = 105/241 (43%), Positives = 153/241 (63%)
Frame = -3
Query: 891 MYQLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSV 712
M QL+ LGALD G LT +GR+MAEFP +P ML+ + D+GCS E+L I++M+ ++
Sbjct: 824 MEQLYNLGALDEEGLLTRVGRRMAEFPQEPPLSKMLLASVDLGCSDEILTIIAMIQTGNI 883
Query: 711 FYRPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVRE 532
FYRP+ ++ +AD + F PE DHLTLL +Y WK+ +S WC E+FV ++R+ ++
Sbjct: 884 FYRPREKQAQADRKRGNFFQPEGDHLTLLTVYQAWKAKQFSGPWCYENFVQLTSLRRAQD 943
Query: 531 VRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHP 352
VR+QL +I+ + +L +VS G D VRK I + +F AAR G Y ++HP
Sbjct: 944 VRKQLLEIMDKYKLNVVSAGNDLTKVRKAITAGFFFHAARKDPQGGYRTIADHQQVYIHP 1003
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDKRK 172
SALF P++V+YHE+ MT +EYM VTA+D RWL EL P F+ + K ++ KR+
Sbjct: 1004 ASALFQQ--QPEWVIYHEVVMTTKEYMREVTAIDPRWLVELAPRFYRSADPTKISKRKRQ 1061
Query: 171 E 169
E
Sbjct: 1062 E 1062
>05_04_0174 - 18728199-18731411
Length = 1070
Score = 186 bits (454), Expect = 2e-47
Identities = 96/244 (39%), Positives = 140/244 (57%), Gaps = 4/244 (1%)
Frame = -3
Query: 885 QLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPS-VF 709
+L+ LGAL+ G LT GR+MAEFPLDP ++ + GCS EV+ I +MLS + VF
Sbjct: 803 ELFALGALNSRGELTKTGRRMAEFPLDPMLSKAIVASERYGCSEEVITIAAMLSAGNAVF 862
Query: 708 YRPQGREEEADAVKEKFQVPES-DHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVRE 532
YRP+ + ADA + F + DH+ LL++YN W + YS QWC E FV + MR+ R+
Sbjct: 863 YRPRDKRVHADAARRAFHAGNAGDHVALLNVYNAWAESGYSPQWCRESFVQHRTMRRARD 922
Query: 531 VRQQLKDILQQQRL-PLVSC-GTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHL 358
VR QL +L++ + P S G D D VRK + + YF+ AARL+ G Y ++ +
Sbjct: 923 VRDQLGALLERVEIAPCSSAGGGDLDAVRKAVTAGYFRHAARLQRDGSYRAVKSRQTVFV 982
Query: 357 HPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDK 178
HP+S + P + +YHEL +T +EYM VT + WL E+ P ++ K+ + K
Sbjct: 983 HPSSGV--AQAPPRWALYHELVLTTKEYMRQVTELKPEWLVEIAPHYYERKDVDEPEPKK 1040
Query: 177 RKEA 166
A
Sbjct: 1041 TAAA 1044
>03_02_0789 + 11207769-11208059,11208370-11208557,11208701-11209785,
11210163-11210288,11210367-11210605,11210688-11210806,
11210894-11211014
Length = 722
Score = 180 bits (438), Expect = 1e-45
Identities = 88/228 (38%), Positives = 136/228 (59%), Gaps = 6/228 (2%)
Frame = -3
Query: 873 LGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYRPQG 694
LGALD G+LT LG M+EFPLDP ML+++ CS E+L I +MLSVP+ F RP+
Sbjct: 472 LGALDDDGNLTPLGETMSEFPLDPQMSKMLVISPKYNCSNEILSISAMLSVPNCFLRPRE 531
Query: 693 REEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVRQQLK 514
++ AD K +F + DHLTLL++Y+ +K NN QWC E+F++A+A++ VRQQL
Sbjct: 532 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPQWCYENFINARALKSADNVRQQLV 591
Query: 513 DILQQQRLPLVSCGTDWDT------VRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHP 352
I+ R L C TD+++ +RK + + YF Q A L+ G Y+ + HLHP
Sbjct: 592 RIM--TRFNLKMCSTDFNSREYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHP 649
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSV 208
++ L P++V+Y+E +T R ++ V + WL ++ P ++ +
Sbjct: 650 SNC---LDHKPEWVIYNEYVLTTRNFIRTVMDIRGDWLIDVAPHYYDL 694
>06_01_0645 + 4670966-4671021,4671128-4671177,4671270-4671350,
4671862-4672078,4673220-4673607,4673830-4674033,
4675174-4675334,4675401-4675586,4675732-4675963,
4676530-4676732,4677074-4677208,4677367-4677550
Length = 698
Score = 162 bits (393), Expect = 4e-40
Identities = 89/244 (36%), Positives = 141/244 (57%), Gaps = 16/244 (6%)
Frame = -3
Query: 885 QLWILGALDGTGSLT-ALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVF 709
QL +LGAL L+ +GRQMA PLDP LIVA++ C E+LI+VSMLSV S+F
Sbjct: 457 QLILLGALTDDYKLSDPVGRQMARLPLDPMYSKALIVASEFKCLEEMLIVVSMLSVESIF 516
Query: 708 YRPQGREEEADAVKEKFQVPESDHLTLLHLYNQ-----WKSNNYS----------SQWCT 574
+ P+ + EEA A ++ F+ E DH+TL+++Y KS N + ++WC
Sbjct: 517 FSPREKLEEARAARKSFESSEGDHITLVNVYRAAKECLEKSKNANAKEKTMEKALNRWCR 576
Query: 573 EHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGE 394
E+F++ +++R +V Q++ +QQ L + SCG D R+C+ +A+F AA + G
Sbjct: 577 ENFINYRSLRHACDVHSQIQGHVQQMGLNVSSCGDDMVLFRRCLTAAFFLNAAMRQPDGS 636
Query: 393 YVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFF 214
Y T +HP+S LF PD +++EL T++ Y+ +T +D WLAEL P ++
Sbjct: 637 YRALATSQSVQIHPSSVLFQK--KPDCAIFNELVRTSQNYVKDLTRIDPVWLAELAPQYY 694
Query: 213 SVKE 202
+ ++
Sbjct: 695 ATED 698
>08_02_0259 - 14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 160 bits (389), Expect = 1e-39
Identities = 88/258 (34%), Positives = 142/258 (55%), Gaps = 22/258 (8%)
Frame = -3
Query: 885 QLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSV-PSVF 709
QL+ L AL+ G LT GR+MAEFPLDP M++ + CS EV+ I SMLSV S+F
Sbjct: 812 QLFALSALNSRGELTKTGRRMAEFPLDPMLSKMIVASEKYKCSDEVISIASMLSVGNSIF 871
Query: 708 YRPQGREEEADAVKEKFQVPE-SDHLTLLHLYNQWKSNNYSSQWCTEHFVHA-------- 556
YRP+ ++ AD + F DH+ LL++YN WK +YS+QWC E+++ +
Sbjct: 872 YRPKDKQVHADNARLNFHTGNVGDHIALLNVYNSWKETDYSTQWCYENYIQSPNGKYQLF 931
Query: 555 ------------KAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAAR 412
++M++ R++R QL+ +L++ + + S +D D ++K I S +F ++R
Sbjct: 932 EGCQLQNIVILVRSMKRARDIRDQLEGLLERVEIEISSNASDLDAIKKAITSGFFHHSSR 991
Query: 411 LKGIGEYVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAE 232
L+ G Y + +P + L P +V+YHEL +T +EYM VT + WL E
Sbjct: 992 LQKNGSYRTVK-------NPQTVL------PRWVIYHELVLTTKEYMRQVTELKPDWLVE 1038
Query: 231 LGPMFFSVKETGKSNRDK 178
+ P ++ +K+ + K
Sbjct: 1039 IAPHYYQLKDVDDTGTKK 1056
>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 85.0 bits (201), Expect = 7e-17
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 15/222 (6%)
Frame = -3
Query: 873 LGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYRPQG 694
+GALD LT+LGR + PLDP ML++ + C L I + L+ + F P
Sbjct: 1627 VGALDDVEELTSLGRHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAYRNPFVLPID 1686
Query: 693 REEEADAVKEKFQVPE-SDHLTLLHLYNQWKSNNYSSQ---WCTEHFVHAKAMRKVREVR 526
R+EEADAVK F SDH+ L+ + WK S + +C E+F+ ++ + ++R
Sbjct: 1687 RKEEADAVKRSFAGDSCSDHIALVKAFEAWKEARRSGRERSFCWENFLSPMTLQMMDDMR 1746
Query: 525 QQLKDIL-------QQQRLPLVS-CGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTG- 373
Q D+L + + L + G D + V +C+ + + K G+ T
Sbjct: 1747 NQFFDLLSDIGFVSKTRGLKAYNYYGKDLEMVCAVLCAGLYPNVVQCKRRGKRTAFYTKD 1806
Query: 372 -MPCHLHPTSALFGLGCSP-DYVVYHELTMTAREYMHCVTAV 253
+HP+S G+ P Y+VY E TA Y+ T +
Sbjct: 1807 VGKVDIHPSSVNAGIHQFPLPYLVYSEKVKTASIYVRDSTNI 1848
>03_05_1133 - 30614901-30615389,30615823-30615933,30616113-30616178,
30616347-30616406,30616493-30616801,30616960-30617108,
30617200-30617269,30617370-30617494,30617516-30617573,
30618176-30618370,30618585-30618857,30618950-30619120,
30619203-30619333,30619423-30619582,30619712-30619900,
30620023-30620118,30620381-30620611,30620715-30620853,
30620903-30621057,30621160-30621378
Length = 1131
Score = 79.0 bits (186), Expect = 5e-15
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Frame = -3
Query: 882 LWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYR 703
L ++GALD +LT LGR ++ P+DP MLI+ A C +L +V+ LS F
Sbjct: 722 LKMIGALDENENLTDLGRYLSMLPVDPKLGKMLIMGAVFRCIDPILTVVAGLSARDPFLL 781
Query: 702 PQGREEEADAVKEKFQVPE-SDHLTLLHLYNQWKS---NNYSSQWCTEHFVHAKAMRKVR 535
PQ + + A K +F + SDH+ L+ Y WK + ++C +F+ A+ ++ +
Sbjct: 782 PQDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIH 841
Query: 534 EVRQQLKDILQQQRLPLVSCGT------DWDTVRKCICSAYF 427
+R+Q IL+ L T + VR ICS F
Sbjct: 842 SLRKQFSYILKDAGLVDSDANTNNSLSHNQSLVRGIICSGLF 883
>11_03_0216 +
11821726-11821860,11823217-11823286,11823704-11823861,
11824304-11824479,11824564-11824612,11825293-11825430
Length = 241
Score = 78.6 bits (185), Expect = 6e-15
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Frame = -3
Query: 642 DHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVRQQLKDILQQ--------QRLP 487
DH+ LL ++ W Y +WC++H + + M+ ++VR QL I+Q+ Q
Sbjct: 18 DHIQLLQIFESWDRTGYDPRWCSDHELQVRGMKFSKDVRNQLSQIIQKIAKGSTDVQAKK 77
Query: 486 LVSCGTDWDTVRKCICSAYFQQAAR--LKGIGEYVNCRTGMPCHLHPTSALFG--LGCSP 319
D+ +R+ +C Y Q A L G + +HP S L G G P
Sbjct: 78 ERKSDPDYRKLRRALCVGYGNQLAERMLHHNGYHTVGYRAQLVQVHPFSVLEGDEYGKLP 137
Query: 318 DYVVYHELTMTAREYMHCVTAVDARWL 238
YVVYHEL T R +M V+AVD W+
Sbjct: 138 VYVVYHELINTTRPFMRNVSAVDQSWV 164
>07_03_1304 - 25629822-25629839,25630091-25631148,25631784-25634928,
25635454-25636293
Length = 1686
Score = 78.6 bits (185), Expect = 6e-15
Identities = 54/224 (24%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Frame = -3
Query: 846 LTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYRPQGREEE---AD 676
LT GR + + ++P +++ G E +++ ++++ S + G +EE AD
Sbjct: 681 LTDTGRYLVKLGIEPRLGKIMLDCFGFGLRKEGVVLAAVMANSSSIFCRVGTDEEKYKAD 740
Query: 675 AVKEKFQVPESDHLTLLHLYNQWKSNNYS-SQWCTEHFVHAKAMRKVREVRQQLKDILQQ 499
+K F + D TLL +Y +W+ + + + WC ++ ++AK MR+ +E L++ L+
Sbjct: 741 RLKVPFCHQDGDLFTLLAVYKEWEDEHENRNTWCWQNSINAKTMRRCQETISDLENCLRH 800
Query: 498 QRLPLVSCGTDWDT---------VRKCICSAYFQQAARLKGIGE--YVNCRTGMPCHLHP 352
+ +V W+ +++ I ++ A G Y T LHP
Sbjct: 801 ELNIIVPSYWCWNPEESTVHDKLLKRIILTSLSGNIAMFSGHERFGYQVISTDQAVKLHP 860
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPM 220
+ +L P++VV+ E+ +Y+ CVTA+D L + PM
Sbjct: 861 SCSLLIYDSKPEWVVFTEILSVPNQYLVCVTAIDPDALCSIHPM 904
>01_01_0788 +
6111890-6112002,6112121-6112265,6113012-6113086,
6114171-6114250,6115500-6115569,6115664-6115759,
6116633-6116756,6116921-6116967,6117044-6117127,
6117199-6117252,6117451-6117551,6118744-6118834,
6119989-6120153,6121341-6121412,6122025-6122111,
6122899-6122952,6122992-6123062,6123882-6124029
Length = 558
Score = 63.3 bits (147), Expect = 3e-10
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Frame = -3
Query: 558 AKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCR 379
A A +KV ++R+QL I+++ +PL SC D + VRK I + F A L+ G + +
Sbjct: 436 AAAEKKVIDIREQLVRIIKRFGIPLTSCDRDMEAVRKAIIAGAFAYACHLE--GRFYSHT 493
Query: 378 TGMPCHLHPTSALF--GLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVK 205
+ P + +L + +P +V+Y L T + YM V A++ WL E P F+ +
Sbjct: 494 S--PTYSQNVISLKKPNIRVNPKWVIYQSLVSTDKHYMRNVIAIEPSWLTEAAPHFYQFR 551
>04_03_0985 - 21438036-21438116,21438373-21438495,21438903-21438995,
21439176-21439388,21439589-21439687,21440248-21440317,
21442549-21442619,21442817-21442954,21443034-21443132,
21444061-21444144,21444268-21444324,21444594-21444683,
21444886-21445026,21445778-21445882,21445962-21446114,
21446215-21446316,21446404-21446562,21447039-21447222,
21447336-21447418,21447523-21447588,21447736-21447793,
21447903-21448003,21448269-21448355,21449063-21449185,
21449285-21449364,21449857-21450066,21450159-21450270,
21450709-21450927,21451356-21451726,21451866-21451965,
21452544-21452752,21453232-21453337,21453435-21453767
Length = 1439
Score = 56.4 bits (130), Expect = 3e-08
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Frame = -3
Query: 882 LWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYR 703
L+ +GA +G L+ LG +A+ P+D M++ A GC + +L + + LS S F
Sbjct: 1081 LYQVGAFEGHEELSPLGYHLAKLPVDVLIGKMMLYGAIFGCLSPILSVAAFLSYKSPFIS 1140
Query: 702 PQGREEEADAVKEKF------------QVPESDHLTLLHLYNQW----KSNNYSS--QWC 577
P+ ++ + K +SDHL ++ YN+W + N S Q+C
Sbjct: 1141 PKDEKQNVEKAKASLMNENLDGSASTADNKQSDHLLMVIAYNKWSRILRENGARSAHQFC 1200
Query: 576 TEHFVHAKAMRKVREVRQQLKDIL 505
++++ M VR++R Q +L
Sbjct: 1201 RSFYLNSTVMYMVRDMRLQYGTLL 1224
>01_06_0840 + 32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 55.2 bits (127), Expect = 7e-08
Identities = 53/217 (24%), Positives = 86/217 (39%), Gaps = 23/217 (10%)
Frame = -3
Query: 873 LGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYRPQG 694
LGAL LT LG ++ P+ P+ ML+ M C L + F P
Sbjct: 808 LGALTQDEQLTELGEKLGSLPVHPSTSKMLLFGILMNCLDPALTLACAADYRDPFLLPMA 867
Query: 693 REEEADAVKEKFQVPE-----SDHLTLLHLYNQW---KSNNYSSQWCTEHFVHAKAMRKV 538
+E A K ++ SD L ++ + W K +Q+C+++FV + M +
Sbjct: 868 PDERKRAAAAKVELASLYGGYSDQLAVVAAMDCWRRAKDRGQEAQFCSKYFVSSNTMNML 927
Query: 537 REVRQQLKDILQQQRLPLV---SC---GTDWDTVRKCICSAYFQQAARL----KGIGE-Y 391
+R+QL++ L Q+ V +C D +R + + + RL K
Sbjct: 928 SNMRKQLQNELAQRGFVPVDASACSLNARDPGIIRAVLMAGAYPMVGRLLPPRKNTRRAV 987
Query: 390 VNCRTGMPCHLHPTSALFGLG----CSPDYVVYHELT 292
+ +G LHP S F L V+Y E+T
Sbjct: 988 IETASGAKVRLHPHSCNFNLSFRKTSGNPLVIYDEIT 1024
>02_05_0672 + 30775458-30775523,30775594-30775662,30775748-30775797,
30775869-30775929,30776016-30776381,30776542-30776754,
30776826-30777056,30777502-30777615,30777703-30778495,
30778535-30778905,30779007-30779378,30779448-30780438,
30781068-30781141,30781953-30782030,30782448-30782525
Length = 1308
Score = 41.5 bits (93), Expect = 9e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = -3
Query: 393 YVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWL 238
Y +C +LH +S++ + +P++VVY EL T R YMH VT+V W+
Sbjct: 1013 YQSCAFNDTIYLHRSSSVARI--APEFVVYSELLHTKRSYMHGVTSVKPGWI 1062
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 882 LWILGALDGTGSLTALGRQMAEFPLDPAQCHMLI 781
L +L ALD G T +G+ MA++P+ P +L+
Sbjct: 800 LKVLEALDSKGEPTLMGKAMAQYPMSPRHSRLLL 833
>08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204
Length = 449
Score = 33.1 bits (72), Expect = 0.31
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 253 HGGDAVHVLARRHGELVVHHVVGAAAQPE 339
H H+LA RHG L VH V +A +P+
Sbjct: 323 HFTQGEHILAHRHGSLYVHRCVSSATRPQ 351
>09_04_0686 +
19457832-19457870,19458021-19458107,19459311-19459391,
19459463-19459489,19459589-19459651,19459768-19459854,
19460290-19460415,19460827-19460960,19461037-19461109,
19461307-19461372,19461778-19461816,19461927-19462051,
19462131-19462245,19463109-19463141,19463525-19463593
Length = 387
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Frame = +1
Query: 223 GPQLGQ------PARVHGGDAVHVLARRHGELVVHHVVGAA------AQPEQRRGGVQVA 366
GP LGQ PA DA + E+ V + +A A P G +V
Sbjct: 12 GPMLGQVLRRLRPATAAAADAARAYSAAAKEMTVREALNSALDEEMSADPSVFLMGEEVG 71
Query: 367 RHAGA--AVHVLADALQPRRLLEVS*TDAFPDGVPVGAAGHERQP 495
+ GA L D P R+L+ T+A G+ VGAA +P
Sbjct: 72 EYQGAYKISKGLLDKYGPERVLDTPITEAGFTGIAVGAAYQGLRP 116
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 298 LVVHHVVGAAAQPEQRRGG--VQVARHAGAAVHVLADALQPRRL 423
L H VG Q EQRRGG Q+A+ ++H L ++ R++
Sbjct: 952 LSAHSAVGVDIQAEQRRGGQSAQLAQELNLSLHDLVPRMRERQV 995
>10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393
Length = 278
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/64 (29%), Positives = 24/64 (37%)
Frame = +1
Query: 193 FAGLLDGEEHGPQLGQPARVHGGDAVHVLARRHGELVVHHVVGAAAQPEQRRGGVQVARH 372
FAG+ + QL P R A H HH+ G AA P + + R
Sbjct: 121 FAGVRQPPQKQQQLPPPPRRRAQQQPASAAAHHRNPNRHHLSGVAAPPAAAANALSIMRK 180
Query: 373 AGAA 384
A AA
Sbjct: 181 AAAA 184
>04_03_0455 - 16085401-16085775
Length = 124
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 327 SPARTAPRWGAGGTACRCGSSRTRRCPSAAP 419
S A ++ G GGTA ++R RRCP P
Sbjct: 91 SAAASSDSDGYGGTAAATSTTRRRRCPEQVP 121
>04_04_1607 +
34750114-34750193,34750472-34750622,34750730-34750796,
34750905-34751142,34751903-34752113
Length = 248
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = -3
Query: 693 REEEADAVKE---KFQVPESDHLTLLHLYNQWKSNNYSSQWCTE 571
REEE E K +P H + Y QW+S + S +C +
Sbjct: 148 REEECGICMEMNNKVVLPNCSHAMCMKCYRQWRSRSQSCPFCRD 191
>03_02_1021 + 13254765-13255092,13255201-13255355
Length = 160
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 427 PAGGAAEGHRRVRELPHRHAVPPAPHLGAVRAGLQPRLRGVPR 299
P GG A R +RE P RH+ P + G+ R+G PR+ PR
Sbjct: 121 PKGGDAP--RGLREKP-RHSEKPTKYAGSPRSGGAPRVIHQPR 160
>11_06_0374 +
22877325-22878500,22879898-22880014,22880131-22880322,
22880742-22880783
Length = 508
Score = 28.7 bits (61), Expect = 6.6
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Frame = +1
Query: 226 PQLGQPARVHGGDAVHV-------LARRHGELV-VHHVVGAAAQPEQRRGGVQVARHAGA 381
P LG R G+ VHV + R HGE V V HVV +P + G+ + A
Sbjct: 313 PALGGEVRREHGEEVHVEPAPGGEVRREHGEEVHVEHVVVLDHEPVEATAGLVLGAPVPA 372
Query: 382 AVHVLADALQPRRL 423
AV A L+ R L
Sbjct: 373 AVR--AAVLEARAL 384
>04_03_0229 -
13006869-13007017,13007925-13008089,13008178-13008332,
13010276-13011021
Length = 404
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/44 (47%), Positives = 22/44 (50%)
Frame = -2
Query: 430 LPAGGAAEGHRRVRELPHRHAVPPAPHLGAVRAGLQPRLRGVPR 299
LPA AA G R LP AV P P + R GLQ R R V R
Sbjct: 200 LPASAAANG--RHLSLPVSVAVAPHPCCQSPRRGLQVRGREVER 241
>01_05_0648 +
23915469-23915898,23916551-23916619,23916956-23917315,
23918435-23918973
Length = 465
Score = 28.7 bits (61), Expect = 6.6
Identities = 27/62 (43%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +1
Query: 211 GEEHGPQLGQPARVHGGDAVHVLARRHGELVVHHVVG----AAAQPEQRRGGVQVARHAG 378
G Q GQ A GG V VLA G VV VV AAA RRGGV R
Sbjct: 322 GGRRRDQAGQAAG-GGGGVVEVLAATCGHAVVVAVVVVVAVAAAAAGSRRGGVPQLRATT 380
Query: 379 AA 384
AA
Sbjct: 381 AA 382
>12_02_0280 -
16729000-16729678,16729948-16730039,16730072-16730772,
16731033-16731144,16731961-16731970,16732954-16733663
Length = 767
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 591 SSQWCTEHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDT 457
S+Q F H + ++ V V L D+ QR+P+ + +W+T
Sbjct: 482 STQPPISKFEHLRVLKLVAYVAPTLLDLSADQRVPVDNASENWET 526
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 28.3 bits (60), Expect = 8.7
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = -3
Query: 876 ILGALDGTGSLTALGRQMAEFPLD------PAQCHMLIVAADMGCSAEVLIIVSMLSVPS 715
I GAL T L G Q + ++ P ++ A + + +++ + P
Sbjct: 152 IRGALVSTNGLLITGGQFLSYLINLAFTKAPGTWRWMLGVAAIPAVVQFFLMLFLPESPR 211
Query: 714 VFYRPQGREEEADAVKEKFQVPE 646
YR +GREEEA+A+ K E
Sbjct: 212 WLYR-KGREEEAEAILRKIYSAE 233
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 28.3 bits (60), Expect = 8.7
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = -1
Query: 704 VLKVARKKPTQS---KRNSKSPNPIT*PSYTCT--TSGNQTTTPVSGARSTSFTRRR*GK 540
VL+VA K P+ + KR + + T S T +T P ARS S TR +
Sbjct: 28 VLEVAEKTPSPNILPKRTATRSSSTTRASRLSVSQTENGHSTAPTRPARSNSVTRPS-IQ 86
Query: 539 CARFASS*RTFCNSSGCRSCPAAPTGTPSGNAS 441
+SS RT ++ S + PT TPS +S
Sbjct: 87 STLMSSSNRTAVLNTSISSVSSRPT-TPSRRSS 118
>04_04_0433 +
25163111-25163471,25163943-25164154,25164420-25164701,
25164794-25164916,25165511-25165664,25165754-25165965,
25166143-25166212,25166294-25166424
Length = 514
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -1
Query: 650 PNPIT*PSYTCTTSGNQTTTPVSGARSTSFTRRR*GKCARFASS*RTFCNSSGCRSCPAA 471
P P + PS CT+S + +P GA R R G C AS+ S C S AA
Sbjct: 16 PPPASLPSTACTSSSRRRASPWGGAGRLIRLRLR-GHCPSPASARAARVVSPRCSSYGAA 74
>03_05_0100 -
20779387-20779641,20779824-20780629,20780757-20781011,
20781107-20781221,20781301-20781353,20781517-20781777,
20782804-20782854,20783081-20783329,20784765-20784990,
20785968-20786132
Length = 811
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +1
Query: 631 GQVIGFGDLEFLFDCVGFFLATLRTVEXXXXXXXXXXXEHLGAAAHVRGHDEHVA 795
G ++ F E LF +G+F + ++G AA++R H EH+A
Sbjct: 311 GILLCFTGTEALFSDLGYFSIRSIQLSFSFGLVPSVLLAYIGQAAYLREHPEHIA 365
>03_03_0166 - 15027065-15028465
Length = 466
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 678 DAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAK 553
DAVK+ F + E D L ++W + + SS W ++ AK
Sbjct: 353 DAVKKSFGLEERDVEPLRMTLHRWGNTSASSVWYVLSYMEAK 394
>02_05_0880 +
32466538-32467083,32467333-32467644,32467731-32468201,
32468481-32469246,32469332-32469774
Length = 845
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 379 HRHAVPPAPHLGAVRAGLQPRLRGVPRAHHD 287
H H V PAPH GA +G P G H D
Sbjct: 67 HGHHVSPAPH-GAGSSGGSPVFHGAGAGHRD 96
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 315 SRGCSPARTAPRWGAGGTACRCGSSRTRRCPSAAP 419
SR C +R A R C CG R PSA+P
Sbjct: 99 SRSCRSSRMAARCWPCRPPCCCGRRRRAASPSASP 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,311,395
Number of Sequences: 37544
Number of extensions: 424862
Number of successful extensions: 2004
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1982
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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