Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10g11
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical pr... 382 e-106
AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determina... 382 e-106
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 242 3e-64
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 242 3e-64
Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical pr... 184 1e-46
Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical p... 184 1e-46
AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determini... 184 1e-46
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 161 8e-40
AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical ... 154 9e-38
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 149 3e-36
AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical ... 115 4e-26
Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 69 6e-12
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 53 3e-07
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 48 9e-06
AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ... 44 1e-04
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 33 0.36
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 2.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.6
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 4.5
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical ... 29 4.5
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 4.5
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 29 5.9
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 5.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 5.9
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 29 5.9
AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen pro... 29 5.9
>Z29560-2|CAA82662.1| 1131|Caenorhabditis elegans Hypothetical protein
K03H1.2 protein.
Length = 1131
Score = 382 bits (940), Expect = e-106
Identities = 168/242 (69%), Positives = 207/242 (85%)
Frame = -3
Query: 891 MYQLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSV 712
MYQLW LGALD TG LT +GR+M EFPLDP MLI++A+MGCS EVL IVSMLSVP++
Sbjct: 834 MYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAI 893
Query: 711 FYRPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVRE 532
F+RP+GREEEADA KEKFQVPESDHLT L++Y QW+++ YS++WC ++++H KA++KVRE
Sbjct: 894 FFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVRE 953
Query: 531 VRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHP 352
VR QLK+I+Q +LPL+S G++WD VRKCICSAYF AARLKGIGEYVN RTG+PC LHP
Sbjct: 954 VRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHP 1013
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDKRK 172
TSALFG+G PDYVVYHEL MTA+EYM CVTAVDA WLAELGPMF+S+KE+ +S ++ +
Sbjct: 1014 TSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKM 1073
Query: 171 EA 166
E+
Sbjct: 1074 ES 1075
>AF120269-1|AAD13795.1| 1131|Caenorhabditis elegans sex determination
protein MOG-1 protein.
Length = 1131
Score = 382 bits (940), Expect = e-106
Identities = 168/242 (69%), Positives = 207/242 (85%)
Frame = -3
Query: 891 MYQLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSV 712
MYQLW LGALD TG LT +GR+M EFPLDP MLI++A+MGCS EVL IVSMLSVP++
Sbjct: 834 MYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAI 893
Query: 711 FYRPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVRE 532
F+RP+GREEEADA KEKFQVPESDHLT L++Y QW+++ YS++WC ++++H KA++KVRE
Sbjct: 894 FFRPKGREEEADAKKEKFQVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVRE 953
Query: 531 VRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHP 352
VR QLK+I+Q +LPL+S G++WD VRKCICSAYF AARLKGIGEYVN RTG+PC LHP
Sbjct: 954 VRAQLKEIMQDLKLPLISNGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHP 1013
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDKRK 172
TSALFG+G PDYVVYHEL MTA+EYM CVTAVDA WLAELGPMF+S+KE+ +S ++ +
Sbjct: 1014 TSALFGMGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKM 1073
Query: 171 EA 166
E+
Sbjct: 1074 ES 1075
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 242 bits (592), Expect = 3e-64
Identities = 110/238 (46%), Positives = 161/238 (67%)
Frame = -3
Query: 882 LWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYR 703
L L ALDG G LT LGR+MAEFPL+P+ +LI++ D+GCS EVL IV+ML+V ++FYR
Sbjct: 936 LHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYR 995
Query: 702 PQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVRQ 523
P+ +++ AD K KF PE DHLTLL +YN WK++++S WC E+F+ ++M++ +++R+
Sbjct: 996 PKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRK 1055
Query: 522 QLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSA 343
QL I+ + +L +VSCG D V+K ICS +F+ AA+ Y G ++HP+SA
Sbjct: 1056 QLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSA 1115
Query: 342 LFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDKRKE 169
F P++VVYHEL MT +EYM VTA+D +WL E P FF + ++ K + KR +
Sbjct: 1116 CFQQ--QPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQ 1171
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 242 bits (592), Expect = 3e-64
Identities = 110/238 (46%), Positives = 161/238 (67%)
Frame = -3
Query: 882 LWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYR 703
L L ALDG G LT LGR+MAEFPL+P+ +LI++ D+GCS EVL IV+ML+V ++FYR
Sbjct: 936 LHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYR 995
Query: 702 PQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVRQ 523
P+ +++ AD K KF PE DHLTLL +YN WK++++S WC E+F+ ++M++ +++R+
Sbjct: 996 PKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRK 1055
Query: 522 QLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSA 343
QL I+ + +L +VSCG D V+K ICS +F+ AA+ Y G ++HP+SA
Sbjct: 1056 QLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSA 1115
Query: 342 LFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDKRKE 169
F P++VVYHEL MT +EYM VTA+D +WL E P FF + ++ K + KR +
Sbjct: 1116 CFQQ--QPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQ 1171
>Z81462-7|CAB03845.1| 1008|Caenorhabditis elegans Hypothetical protein
C04H5.6 protein.
Length = 1008
Score = 184 bits (447), Expect = 1e-46
Identities = 88/237 (37%), Positives = 142/237 (59%), Gaps = 1/237 (0%)
Frame = -3
Query: 885 QLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSV-PSVF 709
QL+ LGAL+ G LT LGR+MAEFP DP M+I + CS E++ I +MLS +VF
Sbjct: 761 QLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVF 820
Query: 708 YRPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREV 529
YRP+ + AD+ ++ F P DH+TL+++YN+W+ +++S +WC E++V + M++ R+V
Sbjct: 821 YRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDV 880
Query: 528 RQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPT 349
R QL +L++ + S TD +RK I + YF ++L G Y + H HP
Sbjct: 881 RDQLVGLLERVEIETKS-STDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPN 939
Query: 348 SALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDK 178
S LF +P +VVY EL T++E+M ++ +++ WL E+ P ++ +E + K
Sbjct: 940 SCLFEE--TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKK 994
>Z81457-12|CAB03819.1| 1008|Caenorhabditis elegans Hypothetical
protein C04H5.6 protein.
Length = 1008
Score = 184 bits (447), Expect = 1e-46
Identities = 88/237 (37%), Positives = 142/237 (59%), Gaps = 1/237 (0%)
Frame = -3
Query: 885 QLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSV-PSVF 709
QL+ LGAL+ G LT LGR+MAEFP DP M+I + CS E++ I +MLS +VF
Sbjct: 761 QLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVF 820
Query: 708 YRPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREV 529
YRP+ + AD+ ++ F P DH+TL+++YN+W+ +++S +WC E++V + M++ R+V
Sbjct: 821 YRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDV 880
Query: 528 RQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPT 349
R QL +L++ + S TD +RK I + YF ++L G Y + H HP
Sbjct: 881 RDQLVGLLERVEIETKS-STDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPN 939
Query: 348 SALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDK 178
S LF +P +VVY EL T++E+M ++ +++ WL E+ P ++ +E + K
Sbjct: 940 SCLFEE--TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKK 994
>AF286900-1|AAG01333.1| 1008|Caenorhabditis elegans sex determining
protein MOG-4 protein.
Length = 1008
Score = 184 bits (447), Expect = 1e-46
Identities = 88/237 (37%), Positives = 142/237 (59%), Gaps = 1/237 (0%)
Frame = -3
Query: 885 QLWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSV-PSVF 709
QL+ LGAL+ G LT LGR+MAEFP DP M+I + CS E++ I +MLS +VF
Sbjct: 761 QLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVF 820
Query: 708 YRPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREV 529
YRP+ + AD+ ++ F P DH+TL+++YN+W+ +++S +WC E++V + M++ R+V
Sbjct: 821 YRPKAQVIHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDV 880
Query: 528 RQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPT 349
R QL +L++ + S TD +RK I + YF ++L G Y + H HP
Sbjct: 881 RDQLVGLLERVEIETKS-STDTIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPN 939
Query: 348 SALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGKSNRDK 178
S LF +P +VVY EL T++E+M ++ +++ WL E+ P ++ +E + K
Sbjct: 940 SCLFEE--TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKK 994
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical protein
F56D2.6a protein.
Length = 739
Score = 161 bits (390), Expect = 8e-40
Identities = 81/228 (35%), Positives = 128/228 (56%), Gaps = 6/228 (2%)
Frame = -3
Query: 873 LGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYRPQG 694
L A++ G LT LG MAEFPLDP MLI + ++ CS E+L I +MLSVP + RP
Sbjct: 490 LQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNE 549
Query: 693 REEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVRQQLK 514
EAD K +F + DHLTLL++Y+ +K N QWC ++F++ + M+ VR QL
Sbjct: 550 MRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLS 609
Query: 513 DILQQQRLPLVSCGTDWDT------VRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHP 352
++ + L VS TD+ + +RK + + +F Q A L+ G YV + +LHP
Sbjct: 610 RVMDKYNLRRVS--TDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSV 208
++ L P++ +Y+E +T + ++ VT V WL ++ P ++ +
Sbjct: 668 STV---LDHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDL 712
>AC091125-4|AAK27888.1| 732|Caenorhabditis elegans Hypothetical
protein Y67D2.6 protein.
Length = 732
Score = 154 bits (373), Expect = 9e-38
Identities = 75/234 (32%), Positives = 136/234 (58%), Gaps = 4/234 (1%)
Frame = -3
Query: 882 LWILGALDGTGSLTA-LGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFY 706
L+ LGA+D T LT+ LG QMAEFPL P L+ +A+ GCS E++ IV+M+ + VF
Sbjct: 482 LYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFI 541
Query: 705 RPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVR 526
P + +AD +++KF V E DH+T+L+++ ++ N S +WC++HFV+ + + + VR
Sbjct: 542 TPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVR 601
Query: 525 QQLKDILQQQRLPLVSCG---TDWDTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLH 355
QL +L++ + VS + +R+C+ + +F QAA+ G+Y+ + P +++
Sbjct: 602 SQLVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMY 661
Query: 354 PTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAELGPMFFSVKETGK 193
S++ P +V++ E+ ++ + VT ++ WL EL P ++ G+
Sbjct: 662 KGSSIMFKKDYPKWVIFTEV---MQDSIRDVTVIEPEWLYELAPHYYEFGTEGE 712
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical protein
F56D2.6b protein.
Length = 700
Score = 149 bits (361), Expect = 3e-36
Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 6/213 (2%)
Frame = -3
Query: 873 LGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYRPQG 694
L A++ G LT LG MAEFPLDP MLI + ++ CS E+L I +MLSVP + RP
Sbjct: 490 LQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNE 549
Query: 693 REEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVRQQLK 514
EAD K +F + DHLTLL++Y+ +K N QWC ++F++ + M+ VR QL
Sbjct: 550 MRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLS 609
Query: 513 DILQQQRLPLVSCGTDWDT------VRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHP 352
++ + L VS TD+ + +RK + + +F Q A L+ G YV + +LHP
Sbjct: 610 RVMDKYNLRRVS--TDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 351 TSALFGLGCSPDYVVYHELTMTAREYMHCVTAV 253
++ L P++ +Y+E +T + ++ VT V
Sbjct: 668 STV---LDHKPEWALYNEFVLTTKNFIRTVTDV 697
>AC132211-3|AAN01436.1| 330|Caenorhabditis elegans Hypothetical
protein Y108F1.5 protein.
Length = 330
Score = 115 bits (277), Expect = 4e-26
Identities = 52/136 (38%), Positives = 87/136 (63%), Gaps = 1/136 (0%)
Frame = -3
Query: 882 LWILGALDGTGSLTA-LGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFY 706
L+ LGA+D T LT+ LG QMAEFPL P L+ +A+ GC E++ IV+M+ + VF
Sbjct: 8 LYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCFTEMVTIVAMMQIQDVFI 67
Query: 705 RPQGREEEADAVKEKFQVPESDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVREVR 526
P + +AD +++KF V E +H+T+L+++ ++ N S +WC++HFV+ + + + VR
Sbjct: 68 TPYRQRHQADVIRKKFAVEEGNHITMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVR 127
Query: 525 QQLKDILQQQRLPLVS 478
QL +L++ + VS
Sbjct: 128 SQLVRLLKRFEIEKVS 143
>Z75541-3|CAA99855.1| 1425|Caenorhabditis elegans Hypothetical protein
F52B5.3 protein.
Length = 1425
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Frame = -3
Query: 846 LTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLS--VPSVFYRPQGREEEADA 673
LT LGR MA PLDP ML+ + C ++ +V++L+ P V + R+ ++
Sbjct: 873 LTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDLQSKM 932
Query: 672 VKEKFQVPESDHLTLLHLYNQW--KSNNYSSQWCTEHFVHAKAMRKVREVRQQLKDILQQ 499
E Q SDHL + L N++ K+N+ +Q+C +HF++ MR V+ R+QL L +
Sbjct: 933 KFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLRELVR 992
Query: 498 QRLPLVSCGTDWDTV 454
+L +S D TV
Sbjct: 993 AKLINISPNRDVLTV 1007
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical protein
T05E8.3 protein.
Length = 856
Score = 68.5 bits (160), Expect = 6e-12
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 30/237 (12%)
Frame = -3
Query: 849 SLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYRPQGREEEADA- 673
+LT +G +PL P +L A GC E + IV+ + ++F + +AD
Sbjct: 584 ALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVD 643
Query: 672 -VKEKFQVPESDHLTLLHLY---NQW---------------KSNN-----YSS---QWCT 574
++ +F+ E DH+TLL L NQ+ K+N Y+ ++C
Sbjct: 644 RIRRRFETREGDHITLLKLVLVTNQFFDQLNKKTESDARYGKANKSLEREYNQTIRKFCN 703
Query: 573 EHFVHAKAMRKVREVRQQLKDILQQQRLPLVSCGTDWDTVRKCICSAYFQQAARL-KGIG 397
++ ++ + ++ + +QLK I +Q++ +CG D+ +RK + F + +
Sbjct: 704 DNMINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKALALGMFLNSCEYDRQED 763
Query: 396 EY-VNCRTGMPCHLHPTSALFGLGCSPDYVVYHELTMTAREYMHCVTAVDARWLAEL 229
Y + + +HP+S L P Y+V+ EL T + VT +D W+ L
Sbjct: 764 RYRLMINPAITLKIHPSSCL--SRSKPAYIVFSELMKTNDLFALQVTLIDGDWVRPL 818
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = -3
Query: 882 LWILGALDGTGSLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYR 703
L +GALD LT+LG+ +A P++P +LI+ +G + + + S +S P+ F
Sbjct: 845 LQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPFVP 904
Query: 702 PQGREEEADAVKEKFQVPE-SDHLTLLHLYN------QWKSNNYSSQWCTEHFVHAKAMR 544
+ + KF + SDH+ ++ + Q ++ ++C + + ++
Sbjct: 905 REKHHSRLSGTQRKFAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFCERYSLSNPVLK 964
Query: 543 KVREVRQQLKDILQQQ 496
R+QL D+L+ Q
Sbjct: 965 MTDGARRQLIDVLRNQ 980
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical protein
C06E1.10 protein.
Length = 1148
Score = 48.0 bits (109), Expect = 9e-06
Identities = 56/255 (21%), Positives = 108/255 (42%), Gaps = 36/255 (14%)
Frame = -3
Query: 846 LTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSV-----PSVFYRPQGREEE 682
+T LG+ +A FPL P+ + +A + ++++S+LSV P R EE
Sbjct: 747 ITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSVREPLIPVSSLRGDTPEET 806
Query: 681 ADAVKEKFQVPE-----------SDHLTLLHLYNQWKSNNYSSQWCTEHFVHAKAMRKVR 535
+ +K + D L+H + + Y+++ C + + KA+ + R
Sbjct: 807 KELMKNVLKERRRWCSHTGARRLGDLKVLMHAASVAEQIKYNARECEKVGLRVKALVEAR 866
Query: 534 EVRQQLKDILQQQRLPLVSCGTDWD----------TVRKCICSAYFQQAARL--KGIGE- 394
++RQQL +I+ + D D +R+ + +++ + AR + +G+
Sbjct: 867 KLRQQLTNIVNASCKKEHAAALDSDLPPPTDQQAQLLRQMVVASFSDRLARRVDRSVGQE 926
Query: 393 ------YVNCRTGMPCHLHPTSALFGLGCSPDYVVYHELT-MTAREYMHCVTAVDARWLA 235
Y + P S +F P++V+Y EL + ++ M V AVD WL+
Sbjct: 927 EVQKGAYETTLIKGHVFIDPCSVVFTE--EPEFVIYQELVQVNEKKLMTSVCAVDKEWLS 984
Query: 234 ELGPMFFSVKETGKS 190
L + + E K+
Sbjct: 985 RLAESYCNYGEQDKN 999
>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
protein Y37E11AM.1 protein.
Length = 1037
Score = 44.4 bits (100), Expect = 1e-04
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 4/124 (3%)
Frame = -3
Query: 849 SLTALGRQMAEFPLDPAQCHMLIVAADMGCSAEVLIIVSMLSVPSVFYRPQGREEEADAV 670
+LTALG +++ P++ ML+ + +L + + LSV S F RE E
Sbjct: 509 TLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTVAAGLSVQSPFTNRSYRELEIVER 568
Query: 669 KEKFQVPESDHLTLLHLYNQW----KSNNYSSQWCTEHFVHAKAMRKVREVRQQLKDILQ 502
+ P D TL+ ++ +W + +W E+ + + ++ ++R Q + IL+
Sbjct: 569 RASLTSPLGDPFTLISIFREWVLQKAFEGTARRWTMENGIDEHRLYEISKLRAQYRQILE 628
Query: 501 QQRL 490
L
Sbjct: 629 DAGL 632
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 677 TQSKRNSKSPNPI-T*PSYTCTTSGNQTTTPVSGARSTSFT 558
T S + S +P+ T P Y T+SGN TT G +T FT
Sbjct: 215 TSSIETNSSTSPVSTTPEYDSTSSGNSETTESDGTTTTVFT 255
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -1
Query: 713 SSTVLKVARKKPTQSKRNSKSPNPIT*PSYTCTTSGNQTTTPVSGARSTSFT 558
SS+ ++ P S S+SPNP T S T T + +Q+T+PV + T
Sbjct: 1246 SSSATSLSSSSPVPS--TSQSPNPSTSGSSTPTPNPSQSTSPVVSTTTGEMT 1295
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 256 GGDAV-HVLAR-RHGELVVHHVVGAAAQPEQRRGGVQVARHAGAAVHVLADALQPRRL 423
GGDA V+A+ R G + H V AAA+ E+R+ A G LA AL+ RR+
Sbjct: 704 GGDARGDVMAQIRQGAQLKH--VDAAAEQERRKSTTSGAAGMGGLAGALAKALEERRM 759
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 256 GGDAV-HVLAR-RHGELVVHHVVGAAAQPEQRRGGVQVARHAGAAVHVLADALQPRRL 423
GGDA V+A+ R G + H V AAA+ E+R+ A G LA AL+ RR+
Sbjct: 530 GGDARGDVMAQIRQGAQLKH--VDAAAEQERRKSTTSGAAGMGGLAGALAKALEERRM 585
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 558 AKAMRKVREVRQQLKDILQQQRLPLVSCGTDWD 460
A+++ + RE+ +QLK+ L ++ L S G DW+
Sbjct: 1271 ARSLNRHRELHRQLKEDLMEEAGNLFSKGEDWE 1303
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 558 AKAMRKVREVRQQLKDILQQQRLPLVSCGTDWD 460
A+++ + RE+ +QLK+ L ++ L S G DW+
Sbjct: 1271 ARSLNRHRELHRQLKEDLMEEAGNLFSKGEDWE 1303
>AL034543-4|CAA22518.1| 323|Caenorhabditis elegans Hypothetical
protein Y81G3A.5 protein.
Length = 323
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 503 NSSGCRSCPAAPTGTP 456
+SSGC +CPA P G+P
Sbjct: 134 SSSGCITCPAGPMGSP 149
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -3
Query: 558 AKAMRKVREVRQQLKDILQQQRLPLVSCGTDWD 460
A+++ + RE+ +QLK+ L ++ L S G DW+
Sbjct: 1271 ARSLNRHRELHRQLKEDLMEEAGNLFSKGEDWE 1303
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = -3
Query: 630 LLHLYNQWKSNNYSSQWCTEHFVHAK-----AMRKVREVRQQLKDILQQQRLPL 484
LL + N W+ ++ +WC H K MR++RE Q+L D L +R P+
Sbjct: 381 LLTMNNLWRVYDFDEKWC--HLSEKKNKIYDLMRRMREY-QELSDDLTAKRRPI 431
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = -3
Query: 630 LLHLYNQWKSNNYSSQWCTEHFVHAK-----AMRKVREVRQQLKDILQQQRLPL 484
LL + N W+ ++ +WC H K MR++RE Q+L D L +R P+
Sbjct: 381 LLTMNNLWRVYDFDEKWC--HLSEKKNKIYDLMRRMREY-QELSDDLTAKRRPI 431
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -1
Query: 713 SSTVLKVARKKPTQSKRNSKSPNPIT*PSYTCTTSGNQTTTPVS 582
S+T KPT S S S T S T TT+ TTT S
Sbjct: 610 STTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = -1
Query: 713 SSTVLKVARKKPTQSKRNSKSPNPIT*PSYTCTTSGNQTTTPVS 582
S+T KPT S S S T S T TT+ TTT S
Sbjct: 610 STTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = -3
Query: 630 LLHLYNQWKSNNYSSQWCTEHFVHAK-----AMRKVREVRQQLKDILQQQRLPL 484
LL + N W+ ++ +WC H K MR++RE Q+L D L +R P+
Sbjct: 381 LLTMNNLWRVYDFDEKWC--HLSEKKNKIYDLMRRMREY-QELSDDLTAKRRPI 431
>AC024751-12|ABF71717.1| 301|Caenorhabditis elegans Collagen
protein 47 protein.
Length = 301
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 509 FCNSSGCRSCPAAPTGTPSGNAS 441
F + +GC CPA P G+P + S
Sbjct: 120 FMSPTGCIRCPAGPPGSPGDHGS 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,474,248
Number of Sequences: 27780
Number of extensions: 303203
Number of successful extensions: 1389
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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