Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10f19
         (419 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    25   1.5  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   3.4  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    22   7.9  

>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -2

Query: 139 HLKMRFIVIHKEMNSLLTTCLFMVVISDMCIFQKICRSYQQFDH 8
           HL   F  I++       T   + +   + IF+ +CR YQ  DH
Sbjct: 42  HLTEEFKAINRFQKVPCITDSQIKLAESVAIFRYLCREYQVPDH 85


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 313 FALDYLLL-VGNECNDYLQTIIHISHFKLIYFI 408
           F + +L L V N CND+   I     + LI+FI
Sbjct: 332 FGISWLPLNVVNMCNDFNSDINSWRFYNLIFFI 364


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
          protein protein.
          Length = 103

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 76 FMVVISDMCIFQKICRSYQQF 14
          F ++ SD C+ ++ CR  ++F
Sbjct: 24 FSLLSSDPCLEKRTCRKNEEF 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,262
Number of Sequences: 2352
Number of extensions: 8664
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)