Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10f19
(419 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022961-1|AAY55377.1| 156|Drosophila melanogaster IP04234p pro... 73 2e-13
AE013599-1179|AAF58747.1| 141|Drosophila melanogaster CG12938-P... 73 2e-13
AE014296-2128|AAF49929.1| 95|Drosophila melanogaster CG10418-P... 52 4e-07
AY071359-1|AAL48981.1| 124|Drosophila melanogaster RE39488p pro... 41 6e-04
AE014296-2169|AAF49893.1| 124|Drosophila melanogaster CG10753-P... 41 8e-04
BT001620-1|AAN71375.1| 154|Drosophila melanogaster RE35747p pro... 37 0.010
AE014134-1871|AAF52938.3| 154|Drosophila melanogaster CG17768-P... 37 0.010
AY113474-1|AAM29479.1| 79|Drosophila melanogaster RE43665p pro... 36 0.022
AE013599-3092|AAF46645.1| 79|Drosophila melanogaster CG9344-PA... 36 0.022
L33341-1|AAA28445.1| 101|Drosophila melanogaster membrane-assoc... 28 5.8
BT029276-1|ABK30913.1| 251|Drosophila melanogaster IP09812p pro... 28 5.8
AY118862-1|AAM50722.1| 88|Drosophila melanogaster GM23968p pro... 28 5.8
AY089664-1|AAL90402.1| 251|Drosophila melanogaster RH30329p pro... 28 5.8
AE014297-566|AAF54058.3| 251|Drosophila melanogaster CG33323-PA... 28 5.8
AE013599-1415|AAF58559.2| 88|Drosophila melanogaster CG16792-P... 28 5.8
>BT022961-1|AAY55377.1| 156|Drosophila melanogaster IP04234p
protein.
Length = 156
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = -1
Query: 275 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 96
+EK+ NTL C LQG +V +DL N+T V G+I++ DG M +A++ D G +
Sbjct: 17 REKYLVSNTLNCWPVMLQGHSVLIDLHNETSVAGIIDVADGHMTCELTHAVFIDRNGGQH 76
Query: 95 AFDNLFIHGRNIRYVHIPENMSLLSTIR 12
FD+ + R IR +HIP + +R
Sbjct: 77 PFDHFMVRNRMIRQIHIPSYLDAEQELR 104
>AE013599-1179|AAF58747.1| 141|Drosophila melanogaster CG12938-PA
protein.
Length = 141
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = -1
Query: 275 QEKFFYHNTLLCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF 96
+EK+ NTL C LQG +V +DL N+T V G+I++ DG M +A++ D G +
Sbjct: 7 REKYLVSNTLNCWPVMLQGHSVLIDLHNETSVAGIIDVADGHMTCELTHAVFIDRNGGQH 66
Query: 95 AFDNLFIHGRNIRYVHIPENMSLLSTIR 12
FD+ + R IR +HIP + +R
Sbjct: 67 PFDHFMVRNRMIRQIHIPSYLDAEQELR 94
>AE014296-2128|AAF49929.1| 95|Drosophila melanogaster CG10418-PA
protein.
Length = 95
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = -1
Query: 230 SLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQ--GNEFAFDNLFIHGRNIR 57
SL GK V V+L+ND +CG + VD ++NI + DP + + N FI G +R
Sbjct: 9 SLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVR 68
Query: 56 YVHIP 42
YV +P
Sbjct: 69 YVQLP 73
>AY071359-1|AAL48981.1| 124|Drosophila melanogaster RE39488p
protein.
Length = 124
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = -1
Query: 227 LQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVH 48
L + VT++L+N T + G I VD MN K+ + + L I G NIRY
Sbjct: 10 LSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDHVHLETLSIRGNNIRYFI 69
Query: 47 IPENMSL 27
+P+++ L
Sbjct: 70 LPDSLPL 76
>AE014296-2169|AAF49893.1| 124|Drosophila melanogaster CG10753-PA
protein.
Length = 124
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = -1
Query: 227 LQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEFAFDNLFIHGRNIRYVH 48
L + VT++L+N T + G I VD MN K+ + + L I G NIRY
Sbjct: 10 LSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNIRYFI 69
Query: 47 IPENMSL 27
+P+++ L
Sbjct: 70 LPDSLPL 76
>BT001620-1|AAN71375.1| 154|Drosophila melanogaster RE35747p
protein.
Length = 154
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 245 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 69
L ++ + Q + V+L+N G + D +MNI+ ++ I G+ F +I G
Sbjct: 4 LSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRG 63
Query: 68 RNIRYVHIPENM 33
I+Y+ IP+ +
Sbjct: 64 STIKYLRIPDEV 75
>AE014134-1871|AAF52938.3| 154|Drosophila melanogaster CG17768-PA,
isoform A protein.
Length = 154
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 245 LCVVNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNAIYCDPQGNEF-AFDNLFIHG 69
L ++ + Q + V+L+N G + D +MNI+ ++ I G+ F +I G
Sbjct: 4 LSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRG 63
Query: 68 RNIRYVHIPENM 33
I+Y+ IP+ +
Sbjct: 64 STIKYLRIPDEV 75
>AY113474-1|AAM29479.1| 79|Drosophila melanogaster RE43665p
protein.
Length = 79
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 236 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNA-IYCDPQGNEFAFDNLFIHGRNI 60
+N + G+ V V L N G++ +DG+MNI + Y + Q + + FI G N+
Sbjct: 11 INQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKN-KYGDAFIRGNNV 69
Query: 59 RYV 51
Y+
Sbjct: 70 LYI 72
>AE013599-3092|AAF46645.1| 79|Drosophila melanogaster CG9344-PA
protein.
Length = 79
Score = 35.9 bits (79), Expect = 0.022
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -1
Query: 236 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKNA-IYCDPQGNEFAFDNLFIHGRNI 60
+N + G+ V V L N G++ +DG+MNI + Y + Q + + FI G N+
Sbjct: 11 INQIHGRPVAVKLNNGVDYRGVLACLDGYMNICLEQTEEYVNGQLKN-KYGDAFIRGNNV 69
Query: 59 RYV 51
Y+
Sbjct: 70 LYI 72
>L33341-1|AAA28445.1| 101|Drosophila melanogaster
membrane-associated protein protein.
Length = 101
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 236 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKN 129
+N L GK V V L+ G + VDG+MN+ N
Sbjct: 13 LNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLAN 48
>BT029276-1|ABK30913.1| 251|Drosophila melanogaster IP09812p
protein.
Length = 251
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 13 RIVDRSDIFSGICTYLILRP*INRLSKANSFPCGSQ*IAFLNEMFIKPSTNSINP 177
R+ ++ F G+ T++ P RLSK ++ I FL+EM +K N P
Sbjct: 93 RMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEM-VKKDKNGNEP 146
>AY118862-1|AAM50722.1| 88|Drosophila melanogaster GM23968p
protein.
Length = 88
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 236 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKN 129
+N L GK V V L+ G + VDG+MN+ N
Sbjct: 13 LNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLAN 48
>AY089664-1|AAL90402.1| 251|Drosophila melanogaster RH30329p
protein.
Length = 251
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 13 RIVDRSDIFSGICTYLILRP*INRLSKANSFPCGSQ*IAFLNEMFIKPSTNSINP 177
R+ ++ F G+ T++ P RLSK ++ I FL+EM +K N P
Sbjct: 93 RMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEM-VKKDKNGNEP 146
>AE014297-566|AAF54058.3| 251|Drosophila melanogaster CG33323-PA
protein.
Length = 251
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 13 RIVDRSDIFSGICTYLILRP*INRLSKANSFPCGSQ*IAFLNEMFIKPSTNSINP 177
R+ ++ F G+ T++ P RLSK ++ I FL+EM +K N P
Sbjct: 93 RMQSINEAFEGLRTHIPTLPYEKRLSKVDTLKLAISYITFLSEM-VKKDKNGNEP 146
>AE013599-1415|AAF58559.2| 88|Drosophila melanogaster CG16792-PA
protein.
Length = 88
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 236 VNSLQGKNVTVDLRNDTYVCGLIELVDGFMNISFKN 129
+N L GK V V L+ G + VDG+MN+ N
Sbjct: 13 LNGLTGKPVLVKLKWGQEYKGFLVSVDGYMNMQLAN 48
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,671,906
Number of Sequences: 53049
Number of extensions: 347782
Number of successful extensions: 576
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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