Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10f15
(875 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 28 0.098
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 28 0.098
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 28 0.098
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 28 0.098
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 28 0.098
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 28 0.098
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 28 0.098
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 28 0.098
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 28 0.098
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 28 0.098
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 28 0.13
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 27 0.17
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 27 0.17
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 27 0.17
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 27 0.17
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 27 0.17
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 24 1.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.8
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 293 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 351
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 28.3 bits (60), Expect = 0.098
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 293 RETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 351
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 27.9 bits (59), Expect = 0.13
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -1
Query: 827 RFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSS----YNKSNMDQLIAIVNFLEK 663
R T + N E++ S E + N L N ++ YNK N ++L +N++E+
Sbjct: 60 RETSKERSRNRTERERSKEPKIISNNNPLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.17
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = -1
Query: 866 KKYIIKNTSGSFQRFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLI 687
K Y +N+ +++ +K + + E++ S E + L N S+YN +N QL
Sbjct: 48 KSYKNENSYRKYRKTSKERSR-DRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLC 103
Query: 686 AIVNFLEK 663
+N++E+
Sbjct: 104 YNINYIEQ 111
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.17
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = -1
Query: 866 KKYIIKNTSGSFQRFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLI 687
K Y +N+ +++ +K + + E++ S E + L N S+YN +N QL
Sbjct: 48 KSYKNENSYRKYRKTSKERSR-DRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLC 103
Query: 686 AIVNFLEK 663
+N++E+
Sbjct: 104 YNINYIEQ 111
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.17
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = -1
Query: 866 KKYIIKNTSGSFQRFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLI 687
K Y +N+ +++ +K + + E++ S E + L N S+YN +N QL
Sbjct: 48 KSYKNENSYRKYRKTSKERSR-DRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLC 103
Query: 686 AIVNFLEK 663
+N++E+
Sbjct: 104 YNINYIEQ 111
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.17
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = -1
Query: 866 KKYIIKNTSGSFQRFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLI 687
K Y +N+ +++ +K + + E++ S E + L N S+YN +N QL
Sbjct: 48 KSYKNENSYRKYRKTSKERSR-DRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLC 103
Query: 686 AIVNFLEK 663
+N++E+
Sbjct: 104 YNINYIEQ 111
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 27.5 bits (58), Expect = 0.17
Identities = 17/68 (25%), Positives = 34/68 (50%)
Frame = -1
Query: 866 KKYIIKNTSGSFQRFTKNQXMVNMPEQQSSTETAAVCKNEKLLNKLESSSYNKSNMDQLI 687
K Y +N+ +++ +K + + E++ S E + L N S+YN +N QL
Sbjct: 48 KSYKNENSYRKYRKTSKERSR-DRTERERSKEPKII---SSLSNNYNYSNYNNNNYKQLC 103
Query: 686 AIVNFLEK 663
+N++E+
Sbjct: 104 YNINYIEQ 111
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 24.2 bits (50), Expect = 1.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 316 SFNSAKFALVSTAVCLFLLAGIAALSLEDDDVDRSAI 426
S+NS FA++ T + +LE DD R+ I
Sbjct: 206 SYNSDIFAMIGTIFLWLFWPSFNSAALEGDDQQRAII 242
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 591 LLAFGHFAFVLHDRHYVEDIVNVLFFQEIYNSN 689
LL + H + D H E +V+++F N+N
Sbjct: 218 LLLYNHARLMSQDNHSKEYLVSIMFSHYDRNNN 250
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,004
Number of Sequences: 438
Number of extensions: 5015
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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