Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10f09
(474 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 243 1e-63
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 243 2e-63
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 204 1e-51
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 198 4e-50
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 196 3e-49
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 183 2e-45
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 173 2e-42
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 157 2e-37
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 155 4e-37
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 126 2e-28
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 117 1e-25
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 101 8e-21
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 100 2e-20
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 100 2e-20
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 94 1e-18
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 91 1e-17
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 86 3e-16
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 85 1e-15
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 82 5e-15
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 78 9e-14
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 78 1e-13
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 76 3e-13
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 71 1e-11
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 69 5e-11
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 68 9e-11
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 62 5e-09
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 50 2e-05
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 50 3e-05
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 47 2e-04
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 46 4e-04
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 45 0.001
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 43 0.003
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 43 0.003
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 43 0.004
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 43 0.004
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 42 0.005
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 42 0.009
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 41 0.012
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 41 0.012
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 40 0.037
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 39 0.049
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 39 0.065
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 39 0.065
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 39 0.065
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 39 0.065
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 38 0.11
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 38 0.11
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 37 0.20
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 37 0.20
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 37 0.26
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 37 0.26
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 37 0.26
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 37 0.26
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 37 0.26
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 36 0.35
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 36 0.46
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 36 0.60
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 36 0.60
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 36 0.60
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 35 0.80
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 35 0.80
UniRef50_A1UB26 Cluster: Putative uncharacterized protein; n=3; ... 35 1.1
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 35 1.1
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 35 1.1
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 34 1.4
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 34 1.4
UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16; Gammap... 34 1.8
UniRef50_Q14591-2 Cluster: Isoform 2 of Q14591 ; n=2; Homo sapie... 33 2.4
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.4
UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17; ... 33 2.4
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 33 3.2
UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;... 33 4.3
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 33 4.3
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 32 5.6
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 7.4
UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2; Proteob... 32 7.4
UniRef50_Q9VHN4 Cluster: CG8043-PA; n=3; Sophophora|Rep: CG8043-... 32 7.4
UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1; D... 32 7.4
UniRef50_UPI00015B5A89 Cluster: PREDICTED: similar to papilin; n... 31 9.8
UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2; Sophophora|... 31 9.8
UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1; ... 31 9.8
UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19; Bacter... 31 9.8
UniRef50_Q758N2 Cluster: Autophagy-related protein 13; n=1; Erem... 31 9.8
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 243 bits (595), Expect = 1e-63
Identities = 116/143 (81%), Positives = 125/143 (87%)
Frame = -1
Query: 465 LSSKMADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDK 286
L K +TE++FQKQP VFL K S+KPLR +K VGLGFKTPREAIEGTYIDK
Sbjct: 40 LGFKTPRETEKAFQKQPHVFLASKVS-----SKKPLRRYKSVGLGFKTPREAIEGTYIDK 94
Query: 285 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 106
KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFR
Sbjct: 95 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFR 154
Query: 105 DVEIGDIVTIGECRPLSKTVRFN 37
DVEIGD+VT+GECRPLSKTVRFN
Sbjct: 155 DVEIGDVVTVGECRPLSKTVRFN 177
Score = 83.8 bits (198), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -1
Query: 453 MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPRE 313
MADQTERSFQKQPT+FLNRKKG+GVK+ LRY ++VGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 243 bits (594), Expect = 2e-63
Identities = 113/141 (80%), Positives = 128/141 (90%), Gaps = 2/141 (1%)
Frame = -1
Query: 453 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 280
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 279 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDV 100
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDV 120
Query: 99 EIGDIVTIGECRPLSKTVRFN 37
+IGDIVT+GECRPLSKTVRFN
Sbjct: 121 QIGDIVTVGECRPLSKTVRFN 141
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 204 bits (497), Expect = 1e-51
Identities = 94/143 (65%), Positives = 119/143 (83%)
Frame = -1
Query: 465 LSSKMADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDK 286
+S+++ Q+ER+FQKQP +F N K VK S++ R++K+ GLGFKTP+ AIEG+YIDK
Sbjct: 1 MSTELTVQSERAFQKQPHIFNNPK----VKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDK 56
Query: 285 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 106
KCPFTG VSIRG+ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP FR
Sbjct: 57 KCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR 116
Query: 105 DVEIGDIVTIGECRPLSKTVRFN 37
V++GDIVT+G+CRP+SKTVRFN
Sbjct: 117 -VQVGDIVTVGQCRPISKTVRFN 138
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 198 bits (484), Expect = 4e-50
Identities = 90/143 (62%), Positives = 114/143 (79%)
Frame = -1
Query: 465 LSSKMADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDK 286
+++++ Q+ER+FQKQP +F N KKG G R++KDVGLGFKTP EAI G Y+DK
Sbjct: 1 MATELVVQSERAFQKQPHIFQNAKKGAG-------RRWYKDVGLGFKTPAEAIYGEYVDK 53
Query: 285 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFR 106
KCPF G VSIRGRILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP FR
Sbjct: 54 KCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR 113
Query: 105 DVEIGDIVTIGECRPLSKTVRFN 37
+ GD+VT+G+CRPLSKTVRFN
Sbjct: 114 -INEGDVVTVGQCRPLSKTVRFN 135
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 196 bits (477), Expect = 3e-49
Identities = 89/136 (65%), Positives = 109/136 (80%)
Frame = -1
Query: 444 QTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 265
+ +R+FQKQ +F N KK + K++ K +RY K+VGLGFK P++AIEG YIDKKCPFTGN
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLA-KKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGN 92
Query: 264 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 85
VS+RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP F V+ GDI
Sbjct: 93 VSVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDI 152
Query: 84 VTIGECRPLSKTVRFN 37
V G+CRPLSKTVRFN
Sbjct: 153 VVCGQCRPLSKTVRFN 168
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 183 bits (445), Expect = 2e-45
Identities = 84/137 (61%), Positives = 106/137 (77%), Gaps = 1/137 (0%)
Frame = -1
Query: 444 QTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 265
QT +QKQ +F+ +K+ +G+K + RY + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 264 VSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 88
VSIRGRIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGD 124
Query: 87 IVTIGECRPLSKTVRFN 37
VT+GECRPLSKTVRFN
Sbjct: 125 TVTVGECRPLSKTVRFN 141
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 173 bits (421), Expect = 2e-42
Identities = 92/164 (56%), Positives = 110/164 (67%), Gaps = 25/164 (15%)
Frame = -1
Query: 453 MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCP 277
MA+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 276 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 160
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 159 ---RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 37
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFN
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFN 163
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 157 bits (380), Expect = 2e-37
Identities = 68/108 (62%), Positives = 87/108 (80%)
Frame = -1
Query: 360 LRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYL 181
+RY K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM RTI+IRR+YL
Sbjct: 15 IRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMHRTIIIRRNYL 74
Query: 180 HYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 37
H++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+N
Sbjct: 75 HFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYN 121
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 155 bits (377), Expect = 4e-37
Identities = 68/112 (60%), Positives = 86/112 (76%)
Frame = -1
Query: 372 SRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 193
++K K++G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++IR
Sbjct: 17 TKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVIIR 76
Query: 192 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFN 37
RDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFN
Sbjct: 77 RDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFN 127
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 126 bits (305), Expect = 2e-28
Identities = 55/96 (57%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Frame = -1
Query: 333 GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRF 154
GFK P A YIDKKCPFTG+V++RGR+ GVV+KMK ++TIV+ +Y+HY KY R+
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 153 EKRHRNMSVHLSPCFRD-VEIGDIVTIGECRPLSKT 49
+RH N SVH+SPCF + +GD V GE RPLSKT
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKT 133
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 117 bits (282), Expect = 1e-25
Identities = 53/86 (61%), Positives = 67/86 (77%)
Frame = -1
Query: 294 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 115
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 114 CFRDVEIGDIVTIGECRPLSKTVRFN 37
++GDIV I ECRP+SKTVRFN
Sbjct: 83 LL-TCKVGDIVIIAECRPISKTVRFN 107
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 101 bits (242), Expect = 8e-21
Identities = 50/99 (50%), Positives = 67/99 (67%)
Frame = -1
Query: 468 SLSSKMADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYID 289
S +S M ++ + F L R+ G KR K R+ K++GLGFKTPREAI+G Y+D
Sbjct: 6 SSTSAMGNRLRKLFLSSLRSSLARRNLEG-KRPGKVERFWKNIGLGFKTPREAIDGAYVD 64
Query: 288 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 172
KKCPFTG VSIRGRIL + + +MQ TI++ RDYLH++
Sbjct: 65 KKCPFTGTVSIRGRILVWYLPQCEMQSTIIVARDYLHFV 103
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 100 bits (239), Expect = 2e-20
Identities = 43/104 (41%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Frame = -1
Query: 348 KDVGLGFKT-PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 172
+D+G+ P+ +G D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+
Sbjct: 2 RDIGIELNNQPKGEWDG---DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYM 58
Query: 171 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 40
K+ R+EKR R + HL C DV +GD V I ECRPLSKT+ F
Sbjct: 59 QKFERYEKRTRRYAAHLPSCIGDVNVGDSVRIMECRPLSKTITF 102
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 100 bits (239), Expect = 2e-20
Identities = 49/106 (46%), Positives = 63/106 (59%)
Frame = -1
Query: 357 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 178
R KD+GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 6 RMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYR 61
Query: 177 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 40
Y KY R+E+R + H PC D + GD V I ECRPLSKT F
Sbjct: 62 YDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSF 106
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 94.3 bits (224), Expect = 1e-18
Identities = 45/103 (43%), Positives = 59/103 (57%)
Frame = -1
Query: 348 KDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 169
+D+GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 168 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 40
KY R+EKR + H C ++GDIVTI ECRP+SKT F
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSF 100
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/98 (44%), Positives = 60/98 (61%)
Frame = -1
Query: 342 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 163
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 162 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 49
+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 59 DRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 86.2 bits (204), Expect = 3e-16
Identities = 38/84 (45%), Positives = 56/84 (66%)
Frame = -1
Query: 291 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 112
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 111 FRDVEIGDIVTIGECRPLSKTVRF 40
V+ GD+V IGE P+SKTV+F
Sbjct: 84 I-SVKEGDVVVIGETMPISKTVKF 106
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 84.6 bits (200), Expect = 1e-15
Identities = 42/103 (40%), Positives = 65/103 (63%)
Frame = -1
Query: 348 KDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 169
+ +G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 168 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 40
KY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISF 129
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 82.2 bits (194), Expect = 5e-15
Identities = 39/105 (37%), Positives = 60/105 (57%)
Frame = -1
Query: 354 YHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 175
Y +++GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y
Sbjct: 2 YTRNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQY 57
Query: 174 LPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 40
+PKY R + + VH+ C + ++ GD V ECR L+KT+ F
Sbjct: 58 IPKYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISF 101
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 78.2 bits (184), Expect = 9e-14
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = -1
Query: 291 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 112
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 111 FRDVEIGDIVTIGECRPLSKTVRF 40
+D++ GD V IGE RPLSKT F
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHF 99
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 77.8 bits (183), Expect = 1e-13
Identities = 34/82 (41%), Positives = 55/82 (67%)
Frame = -1
Query: 291 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 112
D CP+ G++ +R ++L V+K++M + V+ ++LHY+ KYNR+E+R + M V + C
Sbjct: 20 DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIRKYNRYERRRKRMRVRVPEC 79
Query: 111 FRDVEIGDIVTIGECRPLSKTV 46
+V+ GD V I E RPLSKT+
Sbjct: 80 I-EVKPGDKVIIAETRPLSKTI 100
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 76.2 bits (179), Expect = 3e-13
Identities = 41/104 (39%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = -1
Query: 348 KDVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 172
+D+G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 171 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 40
KY R ++ + + PC + +IGDI+TI ECRPL+K F
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSF 100
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 70.9 bits (166), Expect = 1e-11
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = -1
Query: 291 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 112
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 111 FRDVEIGDIVTIGECRPLSKTVRF 40
V+ GD V + E RPL+K+V F
Sbjct: 81 I-PVKPGDEVIVAETRPLAKSVSF 103
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 68.9 bits (161), Expect = 5e-11
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Frame = -1
Query: 348 KDVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 172
+++GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 171 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 40
K+ R+ + + H+ P DV GD V ECRP++K+V F
Sbjct: 60 TKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSF 102
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 68.1 bits (159), Expect = 9e-11
Identities = 40/103 (38%), Positives = 57/103 (55%)
Frame = +1
Query: 25 NFQNIESNCFGQRSAFADRYNITNLHVPEARRQMHGHIPVPFLEPIVFG*VVKVIAADHD 204
NFQNIES+ F S + NIT + E+ R + +I V F ++F V++VI++D+D
Sbjct: 61 NFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIFWNVMQVISSDND 119
Query: 205 SSLHLHFLNDAGEDAAADRNVTSEGTLLVNVGTLNRLTGSLET 333
++H N G+D +D N TSE T VNV T N ET
Sbjct: 120 GTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFET 162
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 62.5 bits (145), Expect = 5e-09
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = -1
Query: 138 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRF 40
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRF 66
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 50.4 bits (115), Expect = 2e-05
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
+I+TG V M +TI + D L PKY++F ++ R H + EIGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 69 CRPLSKTVRF 40
R LSKT F
Sbjct: 62 SRKLSKTKAF 71
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 49.6 bits (113), Expect = 3e-05
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = -1
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
LTG+V KM +T+V+ + L P Y ++ KR + H + +IGD+V I E R
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 63 PLSKTVRF 40
PLSKT R+
Sbjct: 64 PLSKTKRW 71
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R L G V KM +TI + PKY ++ KR + VH ++GDIV I +
Sbjct: 21 RTLIGQVVSDKMHKTITVLVSRKIKHPKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQ 78
Query: 69 CRPLSKT 49
CRP+SKT
Sbjct: 79 CRPISKT 85
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 46.0 bits (104), Expect = 4e-04
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -1
Query: 246 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 67
+L G+V + KMQ++IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 66 RPLSKT 49
RP+SKT
Sbjct: 65 RPISKT 70
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 44.8 bits (101), Expect = 0.001
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = -1
Query: 249 RILTGVVQKMKMQR--TIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
++LTGVV KMQ+ T+++ R + H P Y + KR + H P ++GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 75 GECRPLSKTVRF 40
E RP+SK RF
Sbjct: 60 IESRPISKRKRF 71
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = -1
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S EIGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 81 TIGECRPLSKT 49
E +SKT
Sbjct: 62 ECAESLKISKT 72
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 43.2 bits (97), Expect = 0.003
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = -1
Query: 249 RILTGVVQKMKMQRT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
R + GVV K+ ++T +++ R +H P+Y + KR + +H +V++GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 75 GECRPLSKTVRF 40
ECRPLSK F
Sbjct: 61 VECRPLSKRKSF 72
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 42.7 bits (96), Expect = 0.004
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R+LTG V KM +T+ + D P Y +F +R + + H + GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 69 CRPLSK 52
C P+SK
Sbjct: 62 CAPISK 67
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 42.7 bits (96), Expect = 0.004
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = -1
Query: 264 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 85
+ I+ + G V KM++TIV+ D + P Y + +R VH + +IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 84 VTIGECRPLSK 52
+ I ECRP+SK
Sbjct: 59 IEIVECRPISK 69
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 42.3 bits (95), Expect = 0.005
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = -1
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
S RIL+GVV K +TI ++ + P Y + KR + H IGD V
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKHPLYGKVMKRATKVHAHDEN--NSAAIGDQV 60
Query: 81 TIGECRPLSKT 49
T+ ECRP SK+
Sbjct: 61 TVKECRPFSKS 71
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 41.5 bits (93), Expect = 0.009
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = -1
Query: 255 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
R + LTGVV K +TIV+ D P Y + K + + H + ++GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 75 GECRPLSKTVRF 40
RPLSKT F
Sbjct: 65 VGTRPLSKTKFF 76
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 41.1 bits (92), Expect = 0.012
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = -1
Query: 258 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 79
I+G+++T K TI++ R H PKY + KR + VH V++GD++
Sbjct: 11 IQGKVVTKAGDKSV---TILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 78 IGECRPLSKTVRFN 37
ECRPLSK F+
Sbjct: 64 AIECRPLSKRKSFS 77
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 41.1 bits (92), Expect = 0.012
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = -1
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
L GVV KM +T+V++ D P Y + + + H + +GDIV I E R
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 63 PLSKTVRF 40
PLSKT R+
Sbjct: 75 PLSKTKRW 82
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 39.5 bits (88), Expect = 0.037
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -1
Query: 255 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
+ R + GVV M +++V+ + PKY +F ++ + H +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAH--DADNACGVGDRVTI 64
Query: 75 GECRPLSK 52
EC P SK
Sbjct: 65 SECTPFSK 72
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 39.1 bits (87), Expect = 0.049
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = -1
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
L G+V KMQ+TIV++ + Y R R + H + IGD V I E R
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 63 PLSKTVRF 40
PLSK R+
Sbjct: 74 PLSKLKRW 81
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 38.7 bits (86), Expect = 0.065
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -1
Query: 252 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 75 GECRPLS 55
P+S
Sbjct: 82 KSMLPIS 88
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 38.7 bits (86), Expect = 0.065
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
RIL G V K +T+V+R + P + +R + H ++GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 69 CRPLSKTVRF 40
C P+SK R+
Sbjct: 62 CAPISKDKRW 71
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 38.7 bits (86), Expect = 0.065
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = -1
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
GVV KM +TI + + P Y +F + + H + IGD V I E RPL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 57 SKTVRF 40
S+T R+
Sbjct: 69 SRTKRW 74
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 38.7 bits (86), Expect = 0.065
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++ GVV KM++T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 69 CRPLSKTVRF 40
RPLSK R+
Sbjct: 67 TRPLSKLKRW 76
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 37.9 bits (84), Expect = 0.11
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -1
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
G V KMQ+TIV+ P Y R + + H +GD+V I ECRPL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 57 SKTVRF 40
SK R+
Sbjct: 74 SKLKRW 79
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 37.9 bits (84), Expect = 0.11
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = -1
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
GVV KM +T+V+ + L P Y + +R + H ++GD V I E RPL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 57 SKTVRF 40
SK R+
Sbjct: 71 SKEKRW 76
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 37.1 bits (82), Expect = 0.20
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R LTG V K +T+ + L PKY R E+ + H P ++GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELQP 90
Query: 69 CRPLSKTVRF 40
RP+SKT F
Sbjct: 91 SRPISKTKHF 100
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 37.1 bits (82), Expect = 0.20
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = -1
Query: 264 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 85
+SI+ R+ G+V KM +T+V+ +Y + + + VH P + ++GD+
Sbjct: 1 MSIKERL--GLVISDKMDKTVVVSIANRVTHKRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 84 VTIGECRPLSKTVRF 40
+ I E RPLSKT R+
Sbjct: 57 ILINETRPLSKTKRW 71
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 36.7 bits (81), Expect = 0.26
Identities = 23/66 (34%), Positives = 31/66 (46%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
+ + G V KMQ ++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 69 CRPLSK 52
RPLSK
Sbjct: 60 SRPLSK 65
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 36.7 bits (81), Expect = 0.26
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++LTGVV K +TI + + Y + K+ +N VH + + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 69 CRPLSKTVRF 40
P+S T R+
Sbjct: 71 HIPISATKRW 80
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 36.7 bits (81), Expect = 0.26
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++ TG V KMQ+TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEE--NIAGIGDLVRIEE 72
Query: 69 CRPLSK 52
RPLSK
Sbjct: 73 TRPLSK 78
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 36.7 bits (81), Expect = 0.26
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -1
Query: 243 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
+ G+V KMQ+T+VI + PKY + + + +H P + +GD V E R
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 63 PLSKTVRF 40
SKT F
Sbjct: 84 HFSKTKYF 91
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 36.7 bits (81), Expect = 0.26
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = -1
Query: 381 VKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTI 202
+K P+ V P E ++ YI K +T S+ V K KM T
Sbjct: 82 LKEEEVPVESSTPVSSEEMLPLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT- 138
Query: 201 VIRRDYLHYLPKYNRFEKRHRNMS 130
++ D+ HYL Y++ EKR R S
Sbjct: 139 ALKSDFKHYLDMYDKEEKRRRGKS 162
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 36.3 bits (80), Expect = 0.35
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIV-IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 73
+ L G+V + + +V + Y H L RF+KR + + H E+GD V I
Sbjct: 20 KTLQGIVIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNL--AEVGDFVKIA 75
Query: 72 ECRPLSKTVRF 40
ECRP+SKT F
Sbjct: 76 ECRPISKTKHF 86
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 35.9 bits (79), Expect = 0.46
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -1
Query: 255 RGRIL--TGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
RGR + G V KM +TI + + KY ++ K+ H +IGDIV
Sbjct: 7 RGRKIEVVGEVISDKMDKTISVLIYRMVKHAKYGKYVKKTSVFKAHDEK--NQAKIGDIV 64
Query: 81 TIGECRPLSKTVRF 40
I E RPLSKT R+
Sbjct: 65 KIRETRPLSKTKRW 78
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 35.5 bits (78), Expect = 0.60
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 237 GVVQKMKMQRTIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 64
GVV KM +T+V I+R LH P Y++ R + H +E+G +V I R
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 63 PLSK 52
P+SK
Sbjct: 75 PISK 78
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 35.5 bits (78), Expect = 0.60
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -1
Query: 255 RGR-ILTGVVQKM--KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 85
RGR GVV ++ K ++I +R Y+P + HR+ H + GD+
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDE--MMACQEGDV 66
Query: 84 VTIGECRPLSKTVRF 40
V I +CRP+SKT F
Sbjct: 67 VRIEQCRPISKTKHF 81
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 35.5 bits (78), Expect = 0.60
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++L G+V+ K +T ++ + P Y++ RH+ H + GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 69 CRPLSKTVRF 40
RPLS T RF
Sbjct: 66 TRPLSATKRF 75
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 35.1 bits (77), Expect = 0.80
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = -1
Query: 288 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 109
K P T R + G V KMQ+TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 108 RDVEIGDIVTIGECRPLSKTVRF 40
IGD V++ E RPLS T R+
Sbjct: 105 --AGIGDRVSLMETRPLSATKRW 125
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 35.1 bits (77), Expect = 0.80
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
R L G V KMQ T+ ++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 75 GECRPLSKT 49
ECRP+SKT
Sbjct: 66 EECRPISKT 74
>UniRef50_A1UB26 Cluster: Putative uncharacterized protein; n=3;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium sp. (strain KMS)
Length = 2125
Score = 34.7 bits (76), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 363 PLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 265
P Y +D G GF PRE GT++ +CP G+
Sbjct: 2015 PAEYKRDDGEGFYWPREIDPGTWLSVRCPVEGS 2047
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 34.7 bits (76), Expect = 1.1
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R++ G+V KM +T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 69 CRPLSKTVRF 40
PLSK R+
Sbjct: 62 SEPLSKLKRW 71
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 34.7 bits (76), Expect = 1.1
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = -1
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
G+V MQ+T+V+ + PKY + R R H ++GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 57 SKTVRF 40
SKT R+
Sbjct: 66 SKTKRW 71
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 34.3 bits (75), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
RIL G + K ++T+V+R D P + +R + H ++++G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 69 CRPLSKTVRF 40
C P SK R+
Sbjct: 62 CPPKSKLKRW 71
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 34.3 bits (75), Expect = 1.4
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R L G V KM +T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 69 CRPLSKT 49
RP+SKT
Sbjct: 69 TRPVSKT 75
>UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Psychrobacter arcticum
Length = 91
Score = 33.9 bits (74), Expect = 1.8
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = -1
Query: 246 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 67
+LTG V KM ++I + + L P Y + +R + H + GD+V I E
Sbjct: 13 VLTGRVVSDKMDKSITVLIERLVRHPLYGKQLRRSTKIKAHDEN--NVCQQGDLVRIKET 70
Query: 66 RPLSKT 49
RP+SKT
Sbjct: 71 RPISKT 76
>UniRef50_Q14591-2 Cluster: Isoform 2 of Q14591 ; n=2; Homo
sapiens|Rep: Isoform 2 of Q14591 - Homo sapiens (Human)
Length = 423
Score = 33.5 bits (73), Expect = 2.4
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 254 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 409
RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K
Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 198 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17;
n=1; Cyanidioschyzon merolae|Rep: Chloroplast 30S
ribosomal protein S17 - Cyanidioschyzon merolae (Red
alga)
Length = 82
Score = 33.5 bits (73), Expect = 2.4
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = -1
Query: 243 LTGVVQKMKMQRTIVI--RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
L G+V +MQ+T+++ + H L Y + + + +VH P + +G+++ I
Sbjct: 4 LLGLVVSCRMQKTVIVEVKTQVKHAL--YGKRIMKKKRYAVH-DP-EKKASLGELIWIRT 59
Query: 69 CRPLSKTVRF 40
CRP+SKT ++
Sbjct: 60 CRPISKTKKW 69
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 33.1 bits (72), Expect = 3.2
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
R+L GVV K +T+V++ + + P + ++ + H +IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 69 CRPLSKTVRF 40
+P+SK R+
Sbjct: 62 SKPISKDKRW 71
>UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 499
Score = 32.7 bits (71), Expect = 4.3
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = -1
Query: 294 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY----LPKYNRFEKRHRNMSV 127
+ K C F ++ ++ +I++ +V K+ M ++RR Y + K+ K N
Sbjct: 315 LGKYCYFKDDILLQPQIISAIVSKLSMTDKTILRRGYWMLSNISVSKFPETTKAIINSGA 374
Query: 126 HLSPCFRDVEIGDIVTIGE-CRPLSKTV 46
LS C +E D+ E C L+ T+
Sbjct: 375 FLSSCCTILETNDVKIKSEACWLLANTI 402
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 32.7 bits (71), Expect = 4.3
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = -1
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 82
+I+GR+++ +QK T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISNKMQKTV---TVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 81 TIGECRPLSKT 49
+ E P+SKT
Sbjct: 66 LMTEVAPISKT 76
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 32.3 bits (70), Expect = 5.6
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = -1
Query: 237 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
G+V M +T +R + P ++ +++N V + +GD VTI CRP
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD---LNCNVGDAVTIQPCRPR 63
Query: 57 SKTVRF 40
S T RF
Sbjct: 64 SATKRF 69
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 7.4
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 183 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2;
Proteobacteria|Rep: 30S ribosomal protein S17 - delta
proteobacterium MLMS-1
Length = 86
Score = 31.9 bits (69), Expect = 7.4
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = -1
Query: 255 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
R + G+V KM++TIVI Y ++ +R + ++GD V I
Sbjct: 7 RKKTQEGLVISNKMEKTIVIETTRFTPHKLYGKYIRRR--VKYLADDPEGTCQVGDRVLI 64
Query: 75 GECRPLSKTVRF 40
ECRPLS+ R+
Sbjct: 65 EECRPLSRRKRW 76
>UniRef50_Q9VHN4 Cluster: CG8043-PA; n=3; Sophophora|Rep: CG8043-PA
- Drosophila melanogaster (Fruit fly)
Length = 348
Score = 31.9 bits (69), Expect = 7.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 121 QMHGHIPVPFLEPIVFG*VVKVIAADHDSSLHLHFLNDAG 240
++HG VPFL+ + V ++ + +S++ HFLN AG
Sbjct: 50 RVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAG 89
>UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1;
Drosophila nasutoides|Rep: Putative H3K9
methyltransferase - Drosophila nasutoides
Length = 640
Score = 31.9 bits (69), Expect = 7.4
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -1
Query: 255 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 76
RGRI V+++++MQR+ +RR L L K+ + H N SP R V D+ +I
Sbjct: 336 RGRIEERVLRRLQMQRSCHLRRKQLQKLAKF----EAHMNTVEQPSPPIRVVNDSDLDSI 391
>UniRef50_UPI00015B5A89 Cluster: PREDICTED: similar to papilin; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to papilin -
Nasonia vitripennis
Length = 2437
Score = 31.5 bits (68), Expect = 9.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 183 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 58
L+ +P+ RF RHR + +PC ++E D+ G+C P+
Sbjct: 127 LNCMPRGERFFYRHRESVIDGTPC--NIEKNDVCVEGKCMPV 166
>UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2;
Sophophora|Rep: CG12316-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1188
Score = 31.5 bits (68), Expect = 9.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 261 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 121
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 125
Score = 31.5 bits (68), Expect = 9.8
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 243 LTGVVQK---MKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 73
+ G+V K M T+ + R +H PK + RH+ VH + +GD +
Sbjct: 6 IEGIVTKAGVMAKTVTVTVERRLIH--PKLLKPYIRHKKYLVHDEN--NSLSVGDKIVAS 61
Query: 72 ECRPLSKTVRF 40
CRPLS RF
Sbjct: 62 ACRPLSARKRF 72
>UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19;
Bacteria|Rep: 30S ribosomal protein S17 - Frankia sp.
(strain CcI3)
Length = 102
Score = 31.5 bits (68), Expect = 9.8
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -1
Query: 249 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 70
++ G+V KM +T+V+ + P Y + +R + + H +GD V + E
Sbjct: 25 KVREGLVVSDKMTKTVVVAVEDRVQHPLYGKTIRRTKKVKAHDES--GTTGVGDRVLLME 82
Query: 69 CRPLSKTVRF 40
RPLS T R+
Sbjct: 83 TRPLSATKRW 92
>UniRef50_Q758N2 Cluster: Autophagy-related protein 13; n=1;
Eremothecium gossypii|Rep: Autophagy-related protein 13
- Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 659
Score = 31.5 bits (68), Expect = 9.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 16 AL*NFQNIESNCFGQRSAFADRYNITNLHVPEARRQMHGHIPVPFLEPIV 165
+L FQ+++SN + Y++ H P+ R + + H P+P + P V
Sbjct: 442 SLVRFQSMKSNNDTLSEDLSMSYSLEPTHAPQVRYRSNSHSPIPSISPSV 491
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,807,787
Number of Sequences: 1657284
Number of extensions: 9223230
Number of successful extensions: 24139
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 23435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24086
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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