Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10f06
(246 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 129 1e-32
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 31 0.005
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 27 0.13
DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reduct... 24 0.92
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 23 1.2
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 22 2.8
AY330183-1|AAQ16289.1| 190|Anopheles gambiae odorant-binding pr... 21 4.9
AJ618925-1|CAF02004.1| 204|Anopheles gambiae odorant-binding pr... 21 4.9
AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein. 21 8.5
AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein. 21 8.5
AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram nega... 21 8.5
AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram nega... 21 8.5
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 21 8.5
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 129 bits (312), Expect = 1e-32
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = -3
Query: 229 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 50
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 49 IQKESTLHMVLRLRGG 2
IQKESTLH+VLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 129 bits (312), Expect = 1e-32
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = -3
Query: 229 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 50
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 49 IQKESTLHMVLRLRGG 2
IQKESTLH+VLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 129 bits (312), Expect = 1e-32
Identities = 58/76 (76%), Positives = 69/76 (90%)
Frame = -3
Query: 229 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 50
MQIF+KTLTGKTIT E EP++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 49 IQKESTLHMVLRLRGG 2
IQKESTLH+VLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 31.5 bits (68), Expect = 0.005
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 222 YSSKH*RAKPLPP-KRNPQRRWPISSKKLPIKKVCP*INKDLSLRANNWKIPKLWPITIF 46
Y + H + +PP +RNP+RR P S + P + P + S R +W P+ P +
Sbjct: 240 YKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSW--PRSRPTSKP 297
Query: 45 KR 40
KR
Sbjct: 298 KR 299
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 26.6 bits (56), Expect = 0.13
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 244 SNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVD-QQRLIFAGKQ 83
+ +VK ++T+ + I ETE A+ DL+ +I EG V+ + F+G Q
Sbjct: 339 AGNVKSLGQMETVEIRFIDEETEAADVERDLRNQITGLEGYKVEVTMKTSFSGMQ 393
>DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reductase
protein.
Length = 487
Score = 23.8 bits (49), Expect = 0.92
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 35 RFLLNIVIGHSFGIFQLFARKDKSLLIYG 121
RFL N+ +G F + +L R LL YG
Sbjct: 99 RFLGNLCLGKDFTLEELRERYHAVLLTYG 127
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 23.4 bits (48), Expect = 1.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 139 ADKEGVPVDQQRLIFAGKQLEDSKTM 62
A E PVD L+ K +ED KT+
Sbjct: 166 AQAEDYPVDLYYLMDLSKSMEDDKTI 191
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 22.2 bits (45), Expect = 2.8
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 204 RAKPLPPKRNPQRRWPISSKKL-PIKKVC 121
R P+PP ++ QRR SS + + VC
Sbjct: 63 RMPPVPPPKHSQRRRRSSSPRTRQFRSVC 91
>AY330183-1|AAQ16289.1| 190|Anopheles gambiae odorant-binding
protein AgamOBP57 protein.
Length = 190
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 194 GFARQCFDE 220
GF +QCFDE
Sbjct: 112 GFIQQCFDE 120
>AJ618925-1|CAF02004.1| 204|Anopheles gambiae odorant-binding
protein OBP14426 protein.
Length = 204
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 194 GFARQCFDE 220
GF +QCFDE
Sbjct: 126 GFIQQCFDE 134
>AY873992-1|AAW71999.1| 259|Anopheles gambiae nanos protein.
Length = 259
Score = 20.6 bits (41), Expect = 8.5
Identities = 6/21 (28%), Positives = 15/21 (71%)
Frame = +1
Query: 79 PIVCPQR*VFVDLRAHLLYRQ 141
P++ P+ + ++LR H ++R+
Sbjct: 211 PVITPEDCLAMELRRHKIHRK 231
>AY583530-1|AAS93544.1| 260|Anopheles gambiae NOS protein protein.
Length = 260
Score = 20.6 bits (41), Expect = 8.5
Identities = 6/21 (28%), Positives = 15/21 (71%)
Frame = +1
Query: 79 PIVCPQR*VFVDLRAHLLYRQ 141
P++ P+ + ++LR H ++R+
Sbjct: 212 PVITPEDCLAMELRRHKIHRK 232
>AJ001042-1|CAA04496.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 192 LPPKRNPQRRWPISSK 145
L PKRN WP S +
Sbjct: 196 LLPKRNAYGTWPASGE 211
>AF081533-1|AAD29854.1| 395|Anopheles gambiae putative gram
negative bacteria bindingprotein protein.
Length = 395
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = -1
Query: 192 LPPKRNPQRRWPISSK 145
L PKRN WP S +
Sbjct: 196 LLPKRNAYGTWPASGE 211
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 20.6 bits (41), Expect = 8.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 235 VKMQIFIKTLTGKTITAETEPAE 167
V Q+ + L G + ET+P E
Sbjct: 380 VGYQVVLSHLRGSRVPPETDPVE 402
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,700
Number of Sequences: 2352
Number of extensions: 4736
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12301044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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