Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10e21
(825 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 4.5
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 4.5
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 4.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 4.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 4.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 4.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 4.5
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 4.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 6.0
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 6.0
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 6.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 6.0
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 6.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 6.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 6.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 6.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 6.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.0
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN+ K LYYN+ Y
Sbjct: 100 NNYNKKLYYNINY 112
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN+ K LYYN+ Y
Sbjct: 100 NNYNKKLYYNINY 112
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN+ K LYYN+ Y
Sbjct: 102 NNYNKKLYYNINY 114
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN+ K LYYN+ Y
Sbjct: 102 NNYNKKLYYNINY 114
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN+ K LYYN+ Y
Sbjct: 102 NNYNKKLYYNINY 114
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN+ K LYYN+ Y
Sbjct: 102 NNYNKKLYYNINY 114
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN+ K LYYN+ Y
Sbjct: 102 NNYNKKLYYNINY 114
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN+ K LYYN+ Y
Sbjct: 338 NNYNKKLYYNINY 350
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 105 NNYKKLQYYNINY 117
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 105 NNYKKLQYYNINY 117
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 105 NNYKKLQYYNINY 117
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 105 NNYKKLQYYNINY 117
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 95 NNYKKLQYYNINY 107
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 95 NNYKKLQYYNINY 107
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 95 NNYKKLQYYNINY 107
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 95 NNYKKLQYYNINY 107
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 316 NNYKKLQYYNINY 328
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 327 NNYKKLQYYNINY 339
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 327 NNYKKLQYYNINY 339
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 316 NNYKKLQYYNINY 328
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 544 NNFRKFLYYNL*Y 582
NN++K YYN+ Y
Sbjct: 328 NNYKKLQYYNINY 340
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +3
Query: 378 YKNRFLKIISCLLNSSSFRSRNETLM 455
YK R L ++SC+ +R L+
Sbjct: 92 YKGRALVVVSCVTKDQPYRPHPHNLV 117
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +3
Query: 378 YKNRFLKIISCLLNSSSFRSRNETLM 455
YK R L ++SC+ +R L+
Sbjct: 92 YKGRALVVVSCVTKDQPYRPHPHNLV 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,140
Number of Sequences: 438
Number of extensions: 4959
Number of successful extensions: 31
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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