Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10e05
(833 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 42 1e-04
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 40 6e-04
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 38 0.001
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 37 0.004
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 34 0.022
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 33 0.038
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.050
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 32 0.087
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.27
SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual 31 0.27
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.27
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 30 0.35
SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine l... 29 0.61
SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20 |Schizosacc... 29 0.61
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.61
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.61
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 29 0.81
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 29 0.81
SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.81
SPAC343.10 |met11|mthfr2|methylenetetrahydrofolate reductase Met... 29 1.1
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 28 1.4
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 28 1.9
SPBC1711.14 |rec15||meiotic recombination protein Rec15|Schizosa... 28 1.9
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 28 1.9
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 28 1.9
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 28 1.9
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 1.9
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 27 2.5
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 27 2.5
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 27 2.5
SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomy... 27 3.3
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 27 3.3
SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|c... 27 3.3
SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl... 27 4.3
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 27 4.3
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 5.7
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 26 5.7
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 7.6
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 26 7.6
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 26 7.6
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 7.6
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 41.9 bits (94), Expect = 1e-04
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = -3
Query: 435 LKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIST 256
LK + ++ EQTQL K +L QQ ++ +LD K++ M + E+Q+ R
Sbjct: 640 LKTSKTNLEEQTQLAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEE---EMQVLREGH 696
Query: 255 EKALKSLNDDYAKLAAKNARLSNENKVLSNKNIEL---IKHKNLLQNEYTTLQS 103
E +K ++++KL + + N+ ++S+KN +L ++ L N L+S
Sbjct: 697 ESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALES 750
Score = 35.9 bits (79), Expect = 0.007
Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 7/170 (4%)
Frame = -3
Query: 618 NVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQA 439
N+ ++ S+ Q + + D A L K E N + + T L E
Sbjct: 593 NLYEITFLSMKQKMQLKSLREEIDNTKEALDLSVKERSIQEEKLNESLKTSKTNLEEQTQ 652
Query: 438 ILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKE------L 277
+ +K ++ + Q +++L+ + M+E++ ++ + + K F E
Sbjct: 653 LAEKYHEELLDNQQKLYDLRIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTK 712
Query: 276 QLKRISTEKAL-KSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLL 130
QL I + + S N D K+ L+N L +KN +L NLL
Sbjct: 713 QLDDIKNQFGIISSKNRDLLSELEKSKSLNNSLAALESKNKKLENDLNLL 762
Score = 33.1 bits (72), Expect = 0.050
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = -3
Query: 342 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNK 163
+ ++LD IKN + + ++L +S + KSLN+ A L +KN +L N+ +L+ K
Sbjct: 710 LTKQLDDIKNQFGIISSKNRDL----LSELEKSKSLNNSLAALESKNKKLENDLNLLTEK 765
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 39.5 bits (88), Expect = 6e-04
Identities = 27/117 (23%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = -3
Query: 525 LFEKSLLDDAEDSNNAANSDDTMLSESQAI-LKKLQIDIAEQTQLNIKRQLDLNKLQQTS 349
L EK L + + SN +++ + + + E+ +K+L+ ++ Q +L + ++LQ
Sbjct: 243 LNEKIQLFEQKRSNYSSDGNISKILETDPTSIKELEEEVETQKRLTALWESKSSELQSEV 302
Query: 348 VFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 178
+QEKL ++ YNN+ + + + + +E +L+ L + Y + ++ ++ ENK
Sbjct: 303 AALQEKLTSQQSLYNNVTEELNNNKQQLLISENSLRELQEKYDSVVSE-LQVVKENK 358
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = -3
Query: 375 DLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNAR 196
D KLQQ ++ +LDR+ N +++ + K+ ++ + +++ N+ Y +++
Sbjct: 392 DNMKLQQKVSSLKLQLDRLTNKFSSFCEQVKQ-RIPVVKQQRSEIVRNNIYMNFLSESLE 450
Query: 195 LSNENKVLSNKNIELIKHK 139
SN N L+ EL+ K
Sbjct: 451 TSNNN--LTKVQAELLSTK 467
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 38.3 bits (85), Expect = 0.001
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Frame = -3
Query: 570 NKINDNFDAASLASVLFEKSLLDDAEDSNNAAN---SDDTMLSESQAILKKLQIDIAEQT 400
N + D F++ + A L +KSL A + A N S + LS +Q + ++Q +
Sbjct: 270 NALEDKFNSEA-ARQLLQKSLSIVASNLKQAENKTISYEEKLSIAQNSINEIQTQNRDLK 328
Query: 399 QLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHK-------SFKELQLKRISTEKALK 241
K Q + L + + +QE L+ +KND N+ + KE + K + E +
Sbjct: 329 LETEKLQDQIKALLERNQSLQEALETVKNDEKNLREMNANYETEMKEARQKLNNKEALIS 388
Query: 240 SLNDDYAKLAAKNARLS 190
+DD+ K +RLS
Sbjct: 389 HYDDDFRAKELKISRLS 405
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 36.7 bits (81), Expect = 0.004
Identities = 25/100 (25%), Positives = 51/100 (51%)
Frame = -3
Query: 459 MLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKE 280
+LS Q+ +KK Q D +Q + +L ++++ ++EK + + +D ++ K +
Sbjct: 63 ILSAIQS-MKKQQKDKLQQEN----KDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEY 117
Query: 279 LQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKN 160
L+ + K L SLN ++ +L K A E + L+ +N
Sbjct: 118 LETENTKLVKTLNSLNSEFLQLLRKIAINVKEGRQLTTEN 157
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 34.3 bits (75), Expect = 0.022
Identities = 25/78 (32%), Positives = 37/78 (47%)
Frame = -3
Query: 330 LDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIEL 151
LDR N+Y+ + KS EL KSLN+ + L+ A L E++ N + L
Sbjct: 873 LDRYGNEYDILLKSEHELDSSLEEMRNRHKSLNEHFIMLSDSMANLQVEHE---NMSALL 929
Query: 150 IKHKNLLQNEYTTLQSYK 97
+K K L+N+ S K
Sbjct: 930 LKEKMYLKNQTVEQASLK 947
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 33.5 bits (73), Expect = 0.038
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Frame = -3
Query: 438 ILKKLQI---DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLK 268
+++KL+I + + + N++ +L + +L + + ++DR K ++ + + LQL+
Sbjct: 127 LIQKLEIIEKKLDKSFRKNMEDELRITRLASENNVLISRIDRTKRHFSELFTQKQMLQLQ 186
Query: 267 RISTEKALKSLNDDYAKLAAKNARLSNENKVLSNK 163
++ DDY K+ +N RL E K +K
Sbjct: 187 N-------ENFKDDYEKIKEENKRLYKERKSFLSK 214
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 33.1 bits (72), Expect = 0.050
Identities = 31/140 (22%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Frame = -3
Query: 501 DAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDR 322
+ E ++ +S + ++KL +I + ++ + + ++LQ+ ++E+ ++
Sbjct: 579 EIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEEENNK 638
Query: 321 IKNDYNNMHKSFKELQLKRISTE-KALKSLNDDYAK-LAAKNARL--SNENKVLSNKNIE 154
K D + + E QLK E +L+ N++ + +A K + L SN+NK+L N+ IE
Sbjct: 639 AKEDSTSKTSNLLE-QLKMTEAEVDSLRKENEENKQVIALKESELVKSNDNKLLLNEQIE 697
Query: 153 LIKHK-NLLQNEYTTLQSYK 97
+ + + L+ E ++ + K
Sbjct: 698 SLNDQLSQLKTEMESVTTSK 717
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 32.3 bits (70), Expect = 0.087
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = -3
Query: 453 SESQAILKKLQIDIAEQTQLNIKRQLDL--NKLQQTSVFMQEKLDRIKN---DYNNMHKS 289
+ QA K +DI E + QL++ +K ++ V + ++IK N+HK+
Sbjct: 208 ARDQARKKSRTVDILEGKVNELTHQLNMADSKYNESKVANNSQNNQIKTLKAQNLNIHKN 267
Query: 288 FKELQLKRISTEKALKSLNDDYAKLAAKNARL 193
F+++Q + I T L S + + L + A L
Sbjct: 268 FQKIQSELIQTNSGLYSTKKELSALQVRYATL 299
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 30.7 bits (66), Expect = 0.27
Identities = 21/93 (22%), Positives = 43/93 (46%)
Frame = -3
Query: 456 LSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKEL 277
+SE +A +K I +A Q ++ K + + + + ++ + + K + K E
Sbjct: 517 ISEEEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAE-ENAKREAEEQAKREAEE 575
Query: 276 QLKRISTEKALKSLNDDYAKLAAKNARLSNENK 178
+ KR + EKA + + + A +NA+ E K
Sbjct: 576 KAKREAEEKAKREAEEKAKREAEENAKREAEEK 608
>SPBP8B7.09c |||karyopherin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 978
Score = 30.7 bits (66), Expect = 0.27
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -3
Query: 831 LQCNICFSVAEIKNYFMQPLDRLTIIPVLELD 736
L+C C ++ EI N M+PL++L ++ +L L+
Sbjct: 245 LRCAACETMTEIVNKKMKPLEKLNLLNILNLN 276
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.7 bits (66), Expect = 0.27
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Frame = -3
Query: 657 VESLHFNVYSINRNVVD---VIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDS 487
+E L NV + + +V +I+ T +++++ + D S+ + EK LL + S
Sbjct: 300 LEELKHNVANYSDAIVHKDKLIEDLSTRISEFDNLKSERDTLSIKNEKLEK-LLRNTIGS 358
Query: 486 NNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDY 307
+ + ++ L E LK+ I Q + L+ +Q + ++ +D +N
Sbjct: 359 LKDSRTSNSQLEEEMVELKESNRTIHSQLT---DAESKLSSFEQENKSLKGSIDEYQN-- 413
Query: 306 NNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSN 166
N+ K ++ E+A SL KLA N+ +NK + +
Sbjct: 414 -NLSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKD 459
Score = 29.5 bits (63), Expect = 0.61
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 4/166 (2%)
Frame = -3
Query: 591 VTSVAQW-NKINDNFDAAS-LASVLFEKSLLDDAEDSNNAANSDDTMLSE--SQAILKKL 424
+ SV Q N +N+ S LA++ E +L S+N + + + ++ S+ +
Sbjct: 126 INSVTQKSNLLNELKQVRSKLAALEHENGILSLQLSSSNKKDKNTSSVTTLTSEEDVSYF 185
Query: 423 QIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKAL 244
Q + +Q + L + + + EKLD+ + DY + + ++ + +
Sbjct: 186 QKKLTNMESNFSAKQSEAYDLSRQLLTVTEKLDKKEKDYEKIKEDVSSIKASLAEEQASN 245
Query: 243 KSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQ 106
KSL + +L L + NK +S L + +N L+ E TLQ
Sbjct: 246 KSLRGEQERL---EKLLVSSNKTVST----LRQTENSLRAECKTLQ 284
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.3 bits (65), Expect = 0.35
Identities = 29/150 (19%), Positives = 63/150 (42%), Gaps = 7/150 (4%)
Frame = -3
Query: 579 AQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQT 400
A +IN+ ++ L ++LL + + + ++ L +++ L+ L+ + A
Sbjct: 911 ASLKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKDLLDTKGELESLRENNATVL 970
Query: 399 QLNIKRQLDLNKLQQTSVFMQEKLDRI-------KNDYNNMHKSFKELQLKRISTEKALK 241
+ LQ+T V +LD++ K + M + +++ K I E +L
Sbjct: 971 SEKAEFNEQCKSLQETIVTKDAELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLS 1030
Query: 240 SLNDDYAKLAAKNARLSNENKVLSNKNIEL 151
KL +N+ L ++ +L + EL
Sbjct: 1031 ESLKRVKKLERENSTLISDVSILKQQKEEL 1060
Score = 30.3 bits (65), Expect = 0.35
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Frame = -3
Query: 474 NSDDTMLSESQAILKKLQI-DIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNM 298
N ++ + S A LK +++ +I E L + DL ++ +Q L+ +K+ N
Sbjct: 1135 NKEEKCQNLSDASLKYIELQEIHENLLLKVS---DLENYKKKYEGLQLDLEGLKDVDTN- 1190
Query: 297 HKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLL 130
F+EL K +SL A K + S+ENK LSNK L K N L
Sbjct: 1191 ---FQELSKKHRDLTFNHESLLRQSASYKEKLSLASSENKDLSNKVSSLTKQVNEL 1243
Score = 27.1 bits (57), Expect = 3.3
Identities = 26/127 (20%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Frame = -3
Query: 465 DTMLSESQAILKKLQIDIAEQTQLNIK-----RQL-DLNKLQQTSVFMQEKLDRIKNDYN 304
+++L +S + +KL + +E L+ K +Q+ +L+ ++ K+ + ++Y+
Sbjct: 1206 ESLLRQSASYKEKLSLASSENKDLSNKVSSLTKQVNELSPKASKVPELERKITNLMHEYS 1265
Query: 303 NMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQN 124
+ K+F++ + K + + + L ++L +K KVL E +K L++
Sbjct: 1266 QLGKTFEDEKRKALIASRDNEELRSLKSELESKRKLEVEYQKVL-----EEVKTTRSLRS 1320
Query: 123 EYTTLQS 103
E T L++
Sbjct: 1321 EVTLLRN 1327
>SPBC405.01 |ade1|min4, SPBC4C3.02c|phosphoribosylamine-glycine
ligase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 788
Score = 29.5 bits (63), Expect = 0.61
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -3
Query: 654 ESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLL 505
+ +H N YS+ R +V+ TSV W+K D+ + + ++ K LL
Sbjct: 619 DGVHSNGYSLVRKIVEYSDLEYTSVCPWDKNVRLGDSLLIPTRIYVKPLL 668
>SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 290
Score = 29.5 bits (63), Expect = 0.61
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = -3
Query: 540 SLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKL 361
SL S +S D E++ A+ S D L Q +KL +D +++ +KRQ+DL K
Sbjct: 2 SLVSYPRSESESDIEEETPLASKSFDPTLF--QHARRKLSVDSTKKSPKRLKRQVDLQKS 59
Query: 360 QQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKS 238
E D I N+ + + L + E A KS
Sbjct: 60 SFNDKTFNES-DVISNERFKSNDLLELLPAPKNQAELAPKS 99
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 0.61
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = -3
Query: 486 NNAANSDDTMLSESQAILKKLQIDIAE-QTQLN-IKRQLDLNKLQQTSVFMQEKLDRIKN 313
N D T L E + + L+ + E +T+L ++ D K Q S + E+++ +K
Sbjct: 1344 NKYERVDPTQLEELKKNCEALEKEKQELETKLQETAKETDTFKQQVNS--LNEEVENLKK 1401
Query: 312 DYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIE 154
+ + K +L EK + A L+N+NK L++KN E
Sbjct: 1402 EVEQANT--KNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAE 1452
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.5 bits (63), Expect = 0.61
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = -3
Query: 459 MLSESQAILKKL---QIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKS 289
+ +E Q+I + L Q +I+ + L+ + L+ +++ + K ++ DY N+
Sbjct: 921 LYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELEKDYLNIMAD 980
Query: 288 FKELQLKRISTEKALKSLNDDYAKLAAKNARLSNE 184
++ + EKA+ N + +L K RL +E
Sbjct: 981 YQHSSQHLSNLEKAINEKNLNIRELNEKLMRLDDE 1015
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 29.1 bits (62), Expect = 0.81
Identities = 20/103 (19%), Positives = 47/103 (45%)
Frame = -3
Query: 489 SNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKND 310
S+ + ++T +S+ QI+ E+ I + D KLQ+ + E+ +++ +
Sbjct: 176 SSQTVHEENTAALDSEIDELMKQINEKEEKIEEISDETD--KLQKLLRELDEEKEKVYAE 233
Query: 309 YNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNEN 181
+ + + Q+K++S E+ N ++ + K +L N
Sbjct: 234 EQEFYNNLNQFQIKKLSLERQYDCANLEFEHNSRKLEKLQKMN 276
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 29.1 bits (62), Expect = 0.81
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = -3
Query: 357 QTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENK 178
QT+ ++L++I + NN K+ K R +K L+ + AKLA KN S++
Sbjct: 21 QTAQNPLKELEKIL-ERNNKQKNKKSRNQVRREKKKLLREKTNSGAKLAEKN---SDDKD 76
Query: 177 VLSNKNIELIKHKNLLQNEYTT 112
L+ N L K N Y T
Sbjct: 77 QLTENNDNLYNDKKSNGNFYDT 98
>SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 29.1 bits (62), Expect = 0.81
Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Frame = -3
Query: 516 KSLLDDAEDSNNAANSDDTMLSESQAILKK-LQIDIAEQTQLNIKRQLDLNKLQQTSVFM 340
+ L + + S++ + D+ S+ Q + K+ +++ + Q N+ + DLN L+Q S
Sbjct: 38 QELQEKVKFSSSRFYNKDSTYSKDQGLAKESAALELQKLKQENVLLRKDLNNLEQISDCY 97
Query: 339 QEKLDRIKN---DYN-NMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVL 172
+ +D I Y M++ + I +AL S + K+ +N + N+ K
Sbjct: 98 AKGMDDIMKHVATYTATMNERMNACHKEYIKMYEALASERNSLYKINEQNVQSLNKVKEW 157
Query: 171 SNKNIE 154
K++E
Sbjct: 158 LLKSLE 163
Score = 26.6 bits (56), Expect = 4.3
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 342 MQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAK---LAAKNARLSNENKVL 172
MQ++LD Y + K+ +ELQ K + + + Y+K LA ++A L E + L
Sbjct: 19 MQKELDLSFERYERLFKTTQELQEKVKFSSSRFYNKDSTYSKDQGLAKESAAL--ELQKL 76
Query: 171 SNKNIELIKHKNLLQ 127
+N+ L K N L+
Sbjct: 77 KQENVLLRKDLNNLE 91
>SPAC343.10 |met11|mthfr2|methylenetetrahydrofolate reductase
Met11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 641
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = -3
Query: 660 RVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNN 481
RV HF ++ R+V ++K S +W ++ + L ++ LD+ + +N
Sbjct: 282 RVHGFHFCTLNLERSVALILKNSGLLTKRWKQVESEMEDEKLLRTTRKRLSLDEPAELHN 341
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 28.3 bits (60), Expect = 1.4
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Frame = -3
Query: 543 ASLASVLFEKSLLDDAEDS-NNAANSDDTMLSESQAILKKLQI-----DI--AEQTQLNI 388
A L V + SL + +S + + + ++ L E + K+L++ DI E QL+
Sbjct: 27 AKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSR 86
Query: 387 KRQLDLNKLQQTSVFMQEKLDRIKN-DYNNMH--KSFKELQLKRISTEKALKSLNDDYAK 217
K +L +L+ ++E ++++ D H + + L+ +R E+ L+ + D Y K
Sbjct: 87 KVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQSLERERDDMEQKLEEMTDKYTK 146
Query: 216 LAAK 205
+ A+
Sbjct: 147 VKAE 150
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = -3
Query: 558 DNFDAASL----ASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLN 391
D F+ AS ASV E+S ++ A NNAA S + + S +++ + + ++AE Q
Sbjct: 833 DEFNGASETVDGASVEAERSAMEAAA-LNNAAESTEVVGSSPESVASEQEENVAESAQAR 891
Query: 390 IK 385
++
Sbjct: 892 VE 893
>SPBC1711.14 |rec15||meiotic recombination protein
Rec15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 27.9 bits (59), Expect = 1.9
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Frame = -3
Query: 576 QWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKL-QIDIA-EQ 403
Q K N A+ LA + ++ +++ + S+ SQ +L+ L QI+++ +Q
Sbjct: 24 QHQKSQSNQIASCLAEMNTKQEVVNQTIGQLGRSISE-VQQQNSQLVLQSLNQINMSMQQ 82
Query: 402 TQLNIKRQLD-LNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLK-RISTEKALKSLND 229
L I+ +NKL+QT M K + ++ + N+ K+ + + I T+K L
Sbjct: 83 VALGIQDYASRINKLEQTMSDMNLKFEALQKEQNSNTKTLADCTSQMTIITKKLDAELKK 142
Query: 228 DYAKLAAKNAR-LSNENKVLSN 166
Y + K R + N+ SN
Sbjct: 143 RY--MTTKQTRTVQNQTMPRSN 162
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1328
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -3
Query: 384 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDY 223
R L+ N + + Q++++R+ Y+N+ +E LK + EK DDY
Sbjct: 448 RDLEFNDEDEDEI-EQDEIERVLQKYDNIPLLNEEQALKEKNVEKDFIQWKDDY 500
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 27.9 bits (59), Expect = 1.9
Identities = 25/108 (23%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Frame = -3
Query: 420 IDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALK 241
+D++ L+ + L + ++++ +Q+K ++ +Y N+ + LQ + + E AL+
Sbjct: 781 LDVSNTAILSFEDSLRRERDEKST--LQQKCLNLQYEYENVRIELENLQSRALELESALE 838
Query: 240 SLNDDYAKLAAKNARLSNENKVLS--NKNIELIKHKNLLQNEYTTLQS 103
D AK +K S +K+LS N+N + +K + + + + L+S
Sbjct: 839 QSVSD-AKY-SKAIMQSGLSKLLSSINENKDNLKEFSKSKQKISYLES 884
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/83 (20%), Positives = 39/83 (46%)
Frame = -3
Query: 399 QLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYA 220
Q N + Q L + + S ++ + +++ DY+ + F+E K +S +K ++L
Sbjct: 674 QKNTELQQLLKQNESASELLKSRNEKLCVDYDKLRSVFEEDSSKILSLQKENENLQSQIL 733
Query: 219 KLAAKNARLSNENKVLSNKNIEL 151
+++ + + + L N EL
Sbjct: 734 QISEELVDYRSRCEALEYGNYEL 756
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 486 NNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFM 340
NN + D+T+ +E+ KK + A L ++L LN +TS+F+
Sbjct: 524 NNVPSGDNTLSTEALQDKKKSEELTAHSKILQAAKKLRLNSTLRTSIFV 572
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = -3
Query: 390 IKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLA 211
IK + +K+ + + ++DR+K + N + +E ++ L L ++YA +
Sbjct: 3311 IKSICNYSKVLEKLEPLNSEVDRLKLEQKNAEECIQETIAACKDLDEKLLQLQEEYASMI 3370
Query: 210 AKNARLS---NENKVLSNKNIELIKHKNLLQNEYT 115
++ + +E K ++IE+I ++ +NE++
Sbjct: 3371 SEIHSMELQMDEVKCKMQRSIEVITDLSIERNEWS 3405
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = -3
Query: 504 DDAEDSNNAANSDDTMLSESQAILKKLQIDIAEQTQLNIKRQLDLNK-LQQTSVFMQE-- 334
DD +D D ++ +S +KK++ D+ E + +L K Q + E
Sbjct: 751 DDVKDLKQRLPELDRLILQSDQAIKKIERDMQEWKHNKGSKMAELEKEFNQYKHKLDEFT 810
Query: 333 -KLDRIKNDYNNMHKSFKELQ 274
L++ +NDYN + ++L+
Sbjct: 811 PILEKSENDYNGVKLECEQLE 831
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 27.5 bits (58), Expect = 2.5
Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = -3
Query: 468 DDTMLSESQAILKKLQIDIAEQTQ--LNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMH 295
DDT SESQ + L QTQ + + + +L+ + +V E + + + +H
Sbjct: 180 DDTFFSESQRVTSPLTTSQTVQTQPPQSPEAKTELSLINTKTVIFPENYEDGPSFRSMLH 239
Query: 294 KSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYT 115
+ ++ L + +K +K + A + ++ LS + + ++L + Y
Sbjct: 240 ELEQKSSLMKYYCKKIMKRIVQLSDAYDASQVAVMKLSETLSEASNSTSMNMDILLDSYL 299
Query: 114 T 112
T
Sbjct: 300 T 300
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 27.5 bits (58), Expect = 2.5
Identities = 31/156 (19%), Positives = 62/156 (39%)
Frame = -3
Query: 615 VVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAI 436
VVDV+K S A + D FE D + S + N D +++
Sbjct: 43 VVDVLKVKSESSADELEERDAHLDRFRRDSTFESETSDHEDFSGGSENELDEETTKNANS 102
Query: 435 LKKLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRIST 256
+KK+ ++ E+ + IKR + + KL +I + Y + + + S
Sbjct: 103 IKKISLEEVEKQRKAIKRSGVIYLSRIPPYMAPNKLRQILSQYGKIGRVY---LTPESSA 159
Query: 255 EKALKSLNDDYAKLAAKNARLSNENKVLSNKNIELI 148
++A + N ++ + + E+K ++ EL+
Sbjct: 160 KRAQRLRNGGNKRVMYEEGWIEFESKRVAKSVAELL 195
>SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 243 KSLNDDYAKLAAKNARLSNENKVLSN-KNIELIKHKNLLQNE 121
K+ D + L K+ L N + L++ + ++ IKHK++ QNE
Sbjct: 189 KTRKVDASALEKKSCLLPNSSGTLTDQRGLDTIKHKSIEQNE 230
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/104 (19%), Positives = 50/104 (48%)
Frame = -3
Query: 414 IAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSL 235
+ + ++I+ + K+Q V + +++ +K+D+ N+++ + +K L +
Sbjct: 289 VRNEESIDIRSYVFHKKIQLIKVTISSEMNILKSDFANLYRPY-----FNFLRQKKLIPI 343
Query: 234 NDDYAKLAAKNARLSNENKVLSNKNIELIKHKNLLQNEYTTLQS 103
N + + A +S S+KN++ K K+ + + +T L S
Sbjct: 344 NCECLNIKAYTLFVSLRKYSFSSKNVQ-SKEKSKIMSCFTLLIS 386
>SPCC622.21 |wtf12||wtf element Wtf12|Schizosaccharomyces pombe|chr
3|||Manual
Length = 197
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 654 ESLHFNVYSINRNVVDVIKCSVTSVAQWNKIN 559
+ LH N+YS+ R ++ V+ SV W +N
Sbjct: 78 KDLHPNIYSLLRLLIAVLAVSVVFFTAWGCVN 109
>SPCC830.05c |epl1||histone acetyltransferase complex subunit Epl1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = -3
Query: 384 RQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYA 220
R+ ++ + ++T + DR++ +M S + L+ +K L++L DDYA
Sbjct: 235 RRREIRQARKTRRSDAQSYDRLRRLRQSMETSLQLLEQVYKREQKKLQALEDDYA 289
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.6 bits (56), Expect = 4.3
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +2
Query: 527 TLAKEAASKLSFILF--HCATLVTL-HLITSTTFRFML*TLKC-KLSTLHRGHGIFFRFL 694
+++++ AS+L + LF H A L++L +L T ML + + LHRGH + F
Sbjct: 281 SISQQKASELMYKLFSEHIAFLLSLKNLPEEATLDCMLSICQVFENDNLHRGHSDEYTFA 340
Query: 695 ILRMHIE 715
+L +E
Sbjct: 341 MLEQLLE 347
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 26.2 bits (55), Expect = 5.7
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 14/144 (9%)
Frame = -3
Query: 516 KSLLDDAEDSNNAANSDDTMLSESQAILKKLQIDIAE-QTQLN------IKRQLDLN--- 367
K+ DD+E + + L E Q+ L + +I + + ++N KR+ DL
Sbjct: 185 KANADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRL 244
Query: 366 -KLQQTSVFMQE---KLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNA 199
K+++ + E KL ++NN K F+E + I K S A +
Sbjct: 245 LKVEEHEKSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKEQSSEGSKTANQTHEQK 304
Query: 198 RLSNENKVLSNKNIELIKHKNLLQ 127
L N L K ++ K LL+
Sbjct: 305 ELINS---LEKKVSDIALEKQLLE 325
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.2 bits (55), Expect = 5.7
Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Frame = -3
Query: 519 EKSLLDDAEDS--NNAANSDDTMLSESQAI---LKKLQIDIAEQTQLNIKRQLDL---NK 364
E+S+L D +S +N N + ++ + + LK++Q ++ E + +Q +L N
Sbjct: 971 ERSILIDELESYRSNQFNYQNNLVQDKNELEERLKEIQKEL-EVYNNHFMKQAELMTSNV 1029
Query: 363 LQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSN 187
++ + ++ + +++ NN+ L+ R K KSL DDY +L A+ L +
Sbjct: 1030 TDESQLMLKTLREALQSKTNNIDHLSTILERNR----KEYKSLLDDYNQLRARYKNLQS 1084
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 7.6
Identities = 21/82 (25%), Positives = 36/82 (43%)
Frame = -3
Query: 429 KLQIDIAEQTQLNIKRQLDLNKLQQTSVFMQEKLDRIKNDYNNMHKSFKELQLKRISTEK 250
KL+ + A + +K + ++ + V QEK DR+K N + +E+ + + EK
Sbjct: 385 KLEEERALHEEKLMKMEAEMKTIFSQKV--QEKEDRLKQSENELRTRHREM---KAALEK 439
Query: 249 ALKSLNDDYAKLAAKNARLSNE 184
L D +L A NE
Sbjct: 440 QKADLIDHKNRLMQAKAAAENE 461
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 7.6
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Frame = -3
Query: 594 SVTSV-AQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKKLQI 418
S TS+ A + + +D+ +L ++L + ++ + A S D L + K+
Sbjct: 65 SATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKER-- 122
Query: 417 DIAEQTQLNIKRQLDL---NKLQQTSVFMQEKLDRIKNDYNN-MHKSFKELQLKRISTEK 250
D A + + ++ V M E D++K + + K+F+EL KR T+
Sbjct: 123 DEAREALAKFSDNIGTVSSKTIEVQEVEMGESDDQLKTSLRSTVEKTFQELSSKRKRTKL 182
Query: 249 ALKSLNDD 226
K DD
Sbjct: 183 QPKWATDD 190
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/56 (17%), Positives = 26/56 (46%)
Frame = -3
Query: 321 IKNDYNNMHKSFKELQLKRISTEKALKSLNDDYAKLAAKNARLSNENKVLSNKNIE 154
I N Y++MH+ + + + ++ + D+A L ++ + + V + +E
Sbjct: 67 ISNVYSDMHEKISDFSVTKEQQDRVMYQQKVDFAHLRSELQSIERQEMVALHSQVE 122
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 104 DCNVVYSFCNKFLCLINSIFLFDK 175
+C VYS+ N LCLI S +F K
Sbjct: 35 NCLEVYSYENNRLCLITSANIFAK 58
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,687,280
Number of Sequences: 5004
Number of extensions: 46914
Number of successful extensions: 232
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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