Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10d24
(282 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8; Bilater... 121 3e-27
UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1; ... 120 6e-27
UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10; Euther... 120 8e-27
UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42; Coelom... 117 6e-26
UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8; Metazoa... 111 4e-24
UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28; Fungi/... 101 3e-21
UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17; Dikary... 94 5e-19
UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7; Eukaryo... 89 2e-17
UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11; Euka... 82 2e-15
UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago t... 75 4e-13
UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4; Arabi... 74 5e-13
UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|R... 73 9e-13
UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14; Eukary... 73 1e-12
UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8; Eukaryo... 71 4e-12
UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S riboso... 69 2e-11
UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lambl... 69 2e-11
UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Ho... 69 2e-11
UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=... 67 6e-11
UniRef50_UPI0000499913 Cluster: 40S ribosomal protein S21; n=1; ... 56 2e-07
UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whol... 54 5e-07
UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillar... 53 1e-06
UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa di... 51 4e-06
UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133, w... 51 4e-06
UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1; Ostre... 50 1e-05
UniRef50_Q0F1F0 Cluster: Putative uncharacterized protein; n=1; ... 33 1.6
UniRef50_Q7WYR4 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_UPI0000D9D58F Cluster: PREDICTED: similar to olfactory ... 31 4.9
UniRef50_A3XS22 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_UPI000050F9B6 Cluster: COG1593: TRAP-type C4-dicarboxyl... 31 6.5
UniRef50_UPI000023E5AC Cluster: hypothetical protein FG10491.1; ... 31 6.5
UniRef50_Q6K957 Cluster: Pentatricopeptide (PPR) repeat-containi... 31 6.5
UniRef50_UPI00015B625A Cluster: PREDICTED: similar to dynein hea... 30 8.6
UniRef50_Q8C1R7 Cluster: Adult male testis cDNA, RIKEN full-leng... 30 8.6
UniRef50_Q54EW0 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_A3R6S6 Cluster: Erythrocyte membrane protein 1; n=3; Eu... 30 8.6
UniRef50_A2QR73 Cluster: Contig An08c0130, complete genome. prec... 30 8.6
>UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8;
Bilateria|Rep: 40S ribosomal protein S21 - Homo sapiens
(Human)
Length = 83
Score = 121 bits (292), Expect = 3e-27
Identities = 56/78 (71%), Positives = 63/78 (80%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 55 RMGESDDCIVRLTKKDGI 2
RMGESDD I+RL K DGI
Sbjct: 61 RMGESDDSILRLAKADGI 78
>UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 95
Score = 120 bits (289), Expect = 6e-27
Identities = 54/81 (66%), Positives = 65/81 (80%)
Frame = -3
Query: 250 GRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVV 71
GR+ K NDAG FVDLYCPRKCS+S R+IHAKDHA +Q+ I DV+P TGR +TS +Y +
Sbjct: 10 GRSSK--NDAGGFVDLYCPRKCSSSKRIIHAKDHALIQINIVDVNPVTGRMLETSTVYAI 67
Query: 70 CGAIRRMGESDDCIVRLTKKD 8
C IRR+GESDDCIVRL KK+
Sbjct: 68 CDVIRRLGESDDCIVRLAKKN 88
>UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10;
Eutheria|Rep: 40S ribosomal protein S21 - Mus musculus
(Mouse)
Length = 83
Score = 120 bits (288), Expect = 8e-27
Identities = 56/78 (71%), Positives = 63/78 (80%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR 60
Query: 55 RMGESDDCIVRLTKKDGI 2
RMGESDD I+RL K DGI
Sbjct: 61 RMGESDDSILRLAKADGI 78
>UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42;
Coelomata|Rep: 40S ribosomal protein S21 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 81
Score = 117 bits (281), Expect = 6e-26
Identities = 54/78 (69%), Positives = 62/78 (79%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ IA+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDRVTGRFNGQFKTYAICGAIR 60
Query: 55 RMGESDDCIVRLTKKDGI 2
RMGE+DD ++RL K D I
Sbjct: 61 RMGEADDSLLRLAKTDSI 78
>UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8;
Metazoa|Rep: 40S ribosomal protein S21 - Caenorhabditis
elegans
Length = 88
Score = 111 bits (266), Expect = 4e-24
Identities = 52/79 (65%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR-AADTSKMYVVCGAI 59
MQNDAG+ V+LY PRKCS+SNR+I KDHASVQ+ DVDP TGR S Y +CGAI
Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAI 60
Query: 58 RRMGESDDCIVRLTKKDGI 2
RRMGESDD I+RL +KDG+
Sbjct: 61 RRMGESDDAILRLAQKDGL 79
>UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28;
Fungi/Metazoa group|Rep: 40S ribosomal protein S21 -
Botryotinia fuckeliana B05.10
Length = 88
Score = 101 bits (242), Expect = 3e-21
Identities = 47/78 (60%), Positives = 59/78 (75%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
M+ND GE VDLY PRKCSA+NR+I AKDH SVQ+ IA VD GRA +++Y +CG IR
Sbjct: 1 MENDKGELVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRATGENQVYALCGFIR 59
Query: 55 RMGESDDCIVRLTKKDGI 2
MGESDD + RL ++DG+
Sbjct: 60 AMGESDDSLNRLAQRDGL 77
>UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17;
Dikarya|Rep: 40S ribosomal protein S21 -
Schizosaccharomyces pombe (Fission yeast)
Length = 87
Score = 94.3 bits (224), Expect = 5e-19
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK-MYVVCGAI 59
M+N+AG+ VDLY PRKCSA+NR+I AKDHASVQ+ + VD A GR K Y + G +
Sbjct: 1 MENEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVD-AEGRQIPGEKTTYAISGFV 59
Query: 58 RRMGESDDCIVRLTKKDGI 2
R GESDDCI RLT +DG+
Sbjct: 60 RSKGESDDCINRLTTQDGL 78
>UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7;
Eukaryota|Rep: 40S ribosomal protein S21 - Cyanophora
paradoxa
Length = 82
Score = 88.6 bits (210), Expect = 2e-17
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
MQND G+ VDLY PRKCSA+NRLI A DHA+VQ+ + VDP +G + +CG +R
Sbjct: 1 MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVR 60
Query: 55 RMGESDDCIVRLTKKDGI 2
MGESD + RL K G+
Sbjct: 61 SMGESDAALNRLCVKHGL 78
>UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11;
Eukaryota|Rep: 40S ribosomal protein S21-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 87
Score = 82.2 bits (194), Expect = 2e-15
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 1/79 (1%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKM-YVVCGAI 59
M+ND G+ V+LY PRKCSA+NR+I A DHASVQ+ +A VD GRA + Y + G +
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVD-EEGRAIPGEYVTYALSGYV 59
Query: 58 RRMGESDDCIVRLTKKDGI 2
R GESDD + RL + DG+
Sbjct: 60 RSRGESDDSLNRLAQNDGL 78
>UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago
truncatula|Rep: Ribosomal protein S21e - Medicago
truncatula (Barrel medic)
Length = 106
Score = 74.5 bits (175), Expect = 4e-13
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = -3
Query: 244 TYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCG 65
T KMQN+ G+ +LY PRKCSA+NRLI AKDHASVQ+ + +D +G + +CG
Sbjct: 23 TLKMQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLD-ESGVYNGQFSTFALCG 81
Query: 64 AIRRMGESDDCIVRLTKK 11
R G++D I RL +K
Sbjct: 82 FTRAQGDADSGIDRLWQK 99
>UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4;
Arabidopsis thaliana|Rep: 40S ribosomal protein S21-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 74.1 bits (174), Expect = 5e-13
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
MQN+ G+ +LY PRKCSA+NRLI +KDHASVQL I +D A G + +CG +R
Sbjct: 1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLD-ANGLYTGQFTTFALCGFVR 59
Query: 55 RMGESDDCIVRLTKK 11
G++D + RL +K
Sbjct: 60 AQGDADSGVDRLWQK 74
>UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|Rep:
Ribosomal protein S21 - Homo sapiens (Human)
Length = 66
Score = 73.3 bits (172), Expect = 9e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 101
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14;
Eukaryota|Rep: 40S ribosomal protein S21 - Oryza sativa
subsp. japonica (Rice)
Length = 82
Score = 72.9 bits (171), Expect = 1e-12
Identities = 37/75 (49%), Positives = 48/75 (64%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 55 RMGESDDCIVRLTKK 11
G++D + RL +K
Sbjct: 60 AQGDADSALDRLWQK 74
>UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8;
Eukaryota|Rep: 40S ribosomal protein S21 - Zea mays
(Maize)
Length = 81
Score = 71.3 bits (167), Expect = 4e-12
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I +D A G + + G +R
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLD-ANGLYDGHFTTFALSGFVR 59
Query: 55 RMGESDDCIVRLTKK 11
G++D + RL +K
Sbjct: 60 AQGDADSSLDRLWQK 74
>UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S ribosomal
protein S21; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S21 - Rattus norvegicus
Length = 326
Score = 69.3 bits (162), Expect = 2e-11
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATG 104
+QNDAGEFVDLY PRKCS+SN +I KDH S+QL +A VD +TG
Sbjct: 261 VQNDAGEFVDLYVPRKCSSSNHIITVKDHTSIQLNVAKVDRSTG 304
>UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_72066_72335 - Giardia lamblia
ATCC 50803
Length = 89
Score = 69.3 bits (162), Expect = 2e-11
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
M+N +G VD Y PRKCSA+NRLI KDHA+VQL +A V+ + + CGAIR
Sbjct: 8 MKNSSGVVVDAYIPRKCSATNRLIGPKDHAAVQLSVARVNDKGKMIENNYVTFAFCGAIR 67
Query: 55 RMGESDDCIVRLTKKDGI 2
G D + L ++ G+
Sbjct: 68 SRGGVDSAFMLLAQEHGL 85
>UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Homo
sapiens|Rep: 8.2 kDa differentiation factor - Homo
sapiens (Human)
Length = 97
Score = 68.9 bits (161), Expect = 2e-11
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 125
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
>UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=4;
Trypanosoma cruzi|Rep: 40S ribosomal protein S21,
putative - Trypanosoma cruzi
Length = 251
Score = 67.3 bits (157), Expect = 6e-11
Identities = 35/76 (46%), Positives = 46/76 (60%)
Frame = -3
Query: 229 NDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRM 50
N+ G VDLY PRKC A+N LI + DH++VQ+ IA+VD A G T+ + + G +RR
Sbjct: 8 NEEGVNVDLYIPRKCHATNNLITSYDHSAVQIAIANVD-ANGVLNGTTTTFCIAGYLRRQ 66
Query: 49 GESDDCIVRLTKKDGI 2
ESD I L GI
Sbjct: 67 AESDHAINHLAISKGI 82
>UniRef50_UPI0000499913 Cluster: 40S ribosomal protein S21; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S21 - Entamoeba histolytica HM-1:IMSS
Length = 86
Score = 55.6 bits (128), Expect = 2e-07
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = -3
Query: 211 VDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDC 32
++LY PR CS ++ LI A DHA+VQ+++ V+ G S +Y V G++R+ G SD
Sbjct: 7 IELYIPRHCSVTHTLIAADDHAAVQILVPHVN-ENGVILPESTVYTVKGSVRKDGISDHS 65
Query: 31 IVRLTKKDG 5
+ R +KDG
Sbjct: 66 LNRQFQKDG 74
>UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whole
genome shotgun sequence; n=2; Deuterostomia|Rep:
Chromosome undetermined SCAF15610, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 51
Score = 54.4 bits (125), Expect = 5e-07
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = -3
Query: 136 LVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGI 2
L + VD TGR K Y +CGAIRRMGESDD I+RL K D +
Sbjct: 4 LHLPQVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKNDSV 48
>UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillardia
theta|Rep: 40S ribosomal protein S21 - Guillardia theta
(Cryptomonas phi)
Length = 82
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/75 (38%), Positives = 42/75 (56%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
M + + V Y PRKCS SN+LI+ KDHAS+Q+ I +D ++ G +R
Sbjct: 1 MNSTNKKIVGEYIPRKCSLSNKLINNKDHASIQISIGVLD-KNDLFKGEYDIFAFSGLMR 59
Query: 55 RMGESDDCIVRLTKK 11
+ G+SD IV L +K
Sbjct: 60 KKGKSDYAIVNLIEK 74
>UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa
differentiation factor, partial; n=1; Pan
troglodytes|Rep: PREDICTED: similar to 8.2 kDa
differentiation factor, partial - Pan troglodytes
Length = 60
Score = 51.2 bits (117), Expect = 4e-06
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = -3
Query: 229 NDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 125
N+A EFVDLY PRKCS S+ +I AKDH S+Q+ +A
Sbjct: 1 NNASEFVDLYIPRKCSTSHHVIGAKDHTSMQMNMA 35
>UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 51.2 bits (117), Expect = 4e-06
Identities = 23/78 (29%), Positives = 45/78 (57%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
M ND + VD+Y PRKC +N ++++ D++SVQ+ + VD G + ++ G +R
Sbjct: 1 MINDEKQVVDIYVPRKCQYTNMILNSSDYSSVQINVGQVD-ENGVYNKKNNTVILAGYLR 59
Query: 55 RMGESDDCIVRLTKKDGI 2
+ G+S + + ++ G+
Sbjct: 60 QKGQSAAALEAILRQRGV 77
>UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S21-maize -
Ostreococcus tauri
Length = 101
Score = 49.6 bits (113), Expect = 1e-05
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = -3
Query: 235 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 56
M N GE VDLY PRKCS +NRLI A D ASVQL + +D A G + + G +R
Sbjct: 29 MINADGENVDLYIPRKCSWTNRLITATDKASVQLNVGHLD-ANGVYSGQYTTLALAGYVR 87
>UniRef50_Q0F1F0 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 316
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 63 APQTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRLLAEHF 191
AP T + + + P + +A+ S EAW AW RR + +F
Sbjct: 187 APATPPVAEAAHITPTLPAEAAVLSAVEAWRSAWSRRDINAYF 229
>UniRef50_Q7WYR4 Cluster: Putative uncharacterized protein; n=1;
Rhizobium leguminosarum bv. viciae 3841|Rep: Putative
uncharacterized protein - Rhizobium leguminosarum bv.
viciae (strain 3841)
Length = 452
Score = 31.5 bits (68), Expect = 3.7
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 69 QTTYILDVSAARPVAGSTSAITSCTEAWS-LAWMRRLLAEHFLG 197
Q TY+L + R V GSTS +AW+ +WM LL F G
Sbjct: 327 QPTYLLVGAVHRGVEGSTSTAMFIADAWADFSWMGVLLFSLFAG 370
>UniRef50_UPI0000D9D58F Cluster: PREDICTED: similar to olfactory
receptor, family 7, subfamily D, member 4; n=1; Macaca
mulatta|Rep: PREDICTED: similar to olfactory receptor,
family 7, subfamily D, member 4 - Macaca mulatta
Length = 400
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +2
Query: 149 MVLSVDEAVAGRAFPRAVQVNEFTGVVLH 235
+VL +D AVA +FP +Q+++ T ++LH
Sbjct: 247 VVLGIDVAVAIGSFPWHIQIHKLTSIILH 275
>UniRef50_A3XS22 Cluster: Putative uncharacterized protein; n=1;
Vibrio sp. MED222|Rep: Putative uncharacterized protein
- Vibrio sp. MED222
Length = 292
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 35 IIRLSHPSDSPTDNIHFRCVSSTT 106
IIR PS +P +NI F+C++ TT
Sbjct: 104 IIREVRPSKTPLENIRFKCINRTT 127
>UniRef50_UPI000050F9B6 Cluster: COG1593: TRAP-type C4-dicarboxylate
transport system, large permease component; n=1;
Brevibacterium linens BL2|Rep: COG1593: TRAP-type
C4-dicarboxylate transport system, large permease
component - Brevibacterium linens BL2
Length = 528
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +3
Query: 90 VSAARPVAGSTSAITSCTEAWSLAWMRRLLAEHFLGQYKSTNSPAS 227
V ++ AGS++A +S T A S A RLL G STN PA+
Sbjct: 236 VVSSTSTAGSSTASSSSTAAGSGATKTRLLKAGTAGTSSSTNGPAT 281
>UniRef50_UPI000023E5AC Cluster: hypothetical protein FG10491.1; n=1;
Gibberella zeae PH-1|Rep: hypothetical protein FG10491.1
- Gibberella zeae PH-1
Length = 949
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +3
Query: 18 VNLTMQSSDSPILRIAPQTTYILDVSAARPVAGSTSAITS 137
VN+TMQ S SP++ +TTY A +P AG T + S
Sbjct: 896 VNVTMQQSQSPVV----ETTY-SPAPAVQPTAGKTETVVS 930
>UniRef50_Q6K957 Cluster: Pentatricopeptide (PPR) repeat-containing
protein-like; n=3; Oryza sativa|Rep: Pentatricopeptide
(PPR) repeat-containing protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 727
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = -1
Query: 243 HIKCRTTPVNSLTCTARGNARPATASST 160
H++CR+TP +SLT N PA++SS+
Sbjct: 81 HLRCRSTPRDSLTYNTLLNHLPASSSSS 108
>UniRef50_UPI00015B625A Cluster: PREDICTED: similar to dynein heavy
chain isotype 1B; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to dynein heavy chain isotype 1B -
Nasonia vitripennis
Length = 4116
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 60 IAPQTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRLL 179
+A Q T+ + + R + GS A T+ W L W R+LL
Sbjct: 665 VANQNTWKDTLRSMRDIVGSVEAAYGNTKVWKLHWDRQLL 704
>UniRef50_Q8C1R7 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:1700009P10 product:hypothetical
Serine-rich region containing protein, full insert
sequence; n=2; Mus musculus|Rep: Adult male testis cDNA,
RIKEN full-length enriched library, clone:1700009P10
product:hypothetical Serine-rich region containing
protein, full insert sequence - Mus musculus (Mouse)
Length = 112
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -1
Query: 282 AFASVNSVYRVDVHIKCRTTPVNSLTCTARGNARPATASSTLRT 151
A AS ++ Y C T P SLT RG P T+S+ LR+
Sbjct: 26 ASASASAAYCRLSRAGCSTLPTPSLTVPLRGGRGPRTSSACLRS 69
>UniRef50_Q54EW0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1154
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 29 DAIIRLSHPSDSPTDNIHFRCVSSTTCGGVYV 124
DAII SHP SPT++I F + C G YV
Sbjct: 326 DAIIDTSHPC-SPTESILFAALQCQICFGDYV 356
>UniRef50_A3R6S6 Cluster: Erythrocyte membrane protein 1; n=3;
Eukaryota|Rep: Erythrocyte membrane protein 1 -
Plasmodium falciparum
Length = 2051
Score = 30.3 bits (65), Expect = 8.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 234 CRTTPVNSLTCTARGNARPAT 172
C T P+N +TC RG P T
Sbjct: 1230 CETCPLNGVTCNGRGGTNPCT 1250
>UniRef50_A2QR73 Cluster: Contig An08c0130, complete genome.
precursor; n=6; Trichocomaceae|Rep: Contig An08c0130,
complete genome. precursor - Aspergillus niger
Length = 549
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 33 QSSDSPILRIAPQTTYILDVSAARPVAGSTSAITSCTEAWSLAW 164
++S S ++ +TT +AA A + TS T AW+ AW
Sbjct: 314 EASTSSVVTPVVETTAAATTAAAATTAAAEEVATSWTSAWTSAW 357
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,628,766
Number of Sequences: 1657284
Number of extensions: 5054706
Number of successful extensions: 15102
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 14827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15098
length of database: 575,637,011
effective HSP length: 71
effective length of database: 457,969,847
effective search space used: 10075336634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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