Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10d23
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 5.4
AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein. 31 5.4
AL832804-1|CAI46888.1| 165|Homo sapiens hypothetical protein pr... 31 7.1
X57110-1|CAA40393.1| 906|Homo sapiens c-cbl protein. 30 9.4
BC132733-1|AAI32734.1| 906|Homo sapiens CBL protein protein. 30 9.4
BC035516-1|AAH35516.1| 467|Homo sapiens coiled-coil domain cont... 30 9.4
AL929302-9|CAO03550.1| 660|Homo sapiens RALBP1 associated Eps d... 30 9.4
AL929302-8|CAI41286.1| 659|Homo sapiens RALBP1 associated Eps d... 30 9.4
AL732371-3|CAO03570.1| 660|Homo sapiens RALBP1 associated Eps d... 30 9.4
AL732371-2|CAI40017.1| 659|Homo sapiens RALBP1 associated Eps d... 30 9.4
AK022862-1|BAB14278.1| 467|Homo sapiens protein ( Homo sapiens ... 30 9.4
AF512951-1|AAM43953.1| 520|Homo sapiens RALBP1 associated Eps d... 30 9.4
AF511533-1|AAM43933.1| 659|Homo sapiens RALBP1 associated Eps d... 30 9.4
AF010233-1|AAC02901.1| 521|Homo sapiens RalBP1-interacting prot... 30 9.4
AB208937-1|BAD92174.1| 514|Homo sapiens RalBP1 associated Eps d... 30 9.4
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 31.1 bits (67), Expect = 5.4
Identities = 26/90 (28%), Positives = 44/90 (48%)
Frame = +1
Query: 541 RQYSPIQILNITDTTQLNSRDARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAH 720
R +SP + + + + + S R R R + + + T S++PS P P+K E
Sbjct: 168 RSHSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPS--PAPEKKEKTPELPE 225
Query: 721 LNLKNGK*SIEVPTSTSKMGSKAPKCPPRP 810
++K + S++ TSTS + K PK P P
Sbjct: 226 PSVKVKEPSVQEATSTSDI-LKVPKPEPIP 254
>AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.
Length = 1460
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +1
Query: 655 GSKA-PSCPPQPQKWEVKHRRAHLNLKNGK*SIEVPTSTSKMGSKAPKCPPRPSHINFEE 831
G++A PS PP P E A L+N + + + K P PP P + +
Sbjct: 307 GNEAGPSSPPDPLPNEAARTAAKALLENFGFELVIQYNEGKQAVPPPPTPPPPEALGGGD 366
Query: 832 KAAC 843
K AC
Sbjct: 367 KLAC 370
>AL832804-1|CAI46888.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 707 TVVPTSTSKMGSKASKCPPQPQKWEVKHRSAHLDLHILIS 826
TV+P SK ++A P P+ W+ + +S HL IL++
Sbjct: 68 TVLPRDVSKSWAQAILLPWPPKVWDYRCKSPHLGCFILMA 107
>X57110-1|CAA40393.1| 906|Homo sapiens c-cbl protein.
Length = 906
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 757 PTSTSKMGSKAPKCPPR--PSHINFEEKA-ACHQG 852
PT+ GS+ P+ PP+ P IN E KA +C QG
Sbjct: 809 PTTNVTEGSQVPERPPKPFPRRINSERKAGSCQQG 843
>BC132733-1|AAI32734.1| 906|Homo sapiens CBL protein protein.
Length = 906
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +1
Query: 757 PTSTSKMGSKAPKCPPR--PSHINFEEKA-ACHQG 852
PT+ GS+ P+ PP+ P IN E KA +C QG
Sbjct: 809 PTTNVTEGSQVPERPPKPFPRRINSERKAGSCQQG 843
>BC035516-1|AAH35516.1| 467|Homo sapiens coiled-coil domain
containing 71 protein.
Length = 467
Score = 30.3 bits (65), Expect = 9.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 189 QSPGNPRPRASAKTIKTIPRC 127
+ PGNPRP+A KT P+C
Sbjct: 218 KGPGNPRPKAPRKTTSKGPKC 238
>AL929302-9|CAO03550.1| 660|Homo sapiens RALBP1 associated Eps
domain containing 2 protein.
Length = 660
Score = 30.3 bits (65), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 577 DTTQLNSRD-ARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAHLNLKNGK*SIE 753
D+ L +R +RS A K+ G P+ PP+PQK H RA N
Sbjct: 449 DSNSLKARPRSRSYSSTSIEEAMKR--GEDPPTPPPRPQK---THSRASSLDLNKVFQPS 503
Query: 754 VPTSTSKMGSKAPKCPPRP 810
VP + S + P PPRP
Sbjct: 504 VPATKSGLLPPPPALPPRP 522
>AL929302-8|CAI41286.1| 659|Homo sapiens RALBP1 associated Eps
domain containing 2 protein.
Length = 659
Score = 30.3 bits (65), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 577 DTTQLNSRD-ARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAHLNLKNGK*SIE 753
D+ L +R +RS A K+ G P+ PP+PQK H RA N
Sbjct: 448 DSNSLKARPRSRSYSSTSIEEAMKR--GEDPPTPPPRPQK---THSRASSLDLNKVFQPS 502
Query: 754 VPTSTSKMGSKAPKCPPRP 810
VP + S + P PPRP
Sbjct: 503 VPATKSGLLPPPPALPPRP 521
>AL732371-3|CAO03570.1| 660|Homo sapiens RALBP1 associated Eps
domain containing 2 protein.
Length = 660
Score = 30.3 bits (65), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 577 DTTQLNSRD-ARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAHLNLKNGK*SIE 753
D+ L +R +RS A K+ G P+ PP+PQK H RA N
Sbjct: 449 DSNSLKARPRSRSYSSTSIEEAMKR--GEDPPTPPPRPQK---THSRASSLDLNKVFQPS 503
Query: 754 VPTSTSKMGSKAPKCPPRP 810
VP + S + P PPRP
Sbjct: 504 VPATKSGLLPPPPALPPRP 522
>AL732371-2|CAI40017.1| 659|Homo sapiens RALBP1 associated Eps
domain containing 2 protein.
Length = 659
Score = 30.3 bits (65), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 577 DTTQLNSRD-ARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAHLNLKNGK*SIE 753
D+ L +R +RS A K+ G P+ PP+PQK H RA N
Sbjct: 448 DSNSLKARPRSRSYSSTSIEEAMKR--GEDPPTPPPRPQK---THSRASSLDLNKVFQPS 502
Query: 754 VPTSTSKMGSKAPKCPPRP 810
VP + S + P PPRP
Sbjct: 503 VPATKSGLLPPPPALPPRP 521
>AK022862-1|BAB14278.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ12800 fis, clone NT2RP2002079, weakly similar to
HISTONE H1, GONADAL. ).
Length = 467
Score = 30.3 bits (65), Expect = 9.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 189 QSPGNPRPRASAKTIKTIPRC 127
+ PGNPRP+A KT P+C
Sbjct: 218 KGPGNPRPKAPRKTTSKGPKC 238
>AF512951-1|AAM43953.1| 520|Homo sapiens RALBP1 associated Eps
domain containing protein 2b protein.
Length = 520
Score = 30.3 bits (65), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 577 DTTQLNSRD-ARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAHLNLKNGK*SIE 753
D+ L +R +RS A K+ G P+ PP+PQK H RA N
Sbjct: 309 DSNSLKARPRSRSYSSTSIEEAMKR--GEDPPTPPPRPQK---THSRASSLDLNKVFQPS 363
Query: 754 VPTSTSKMGSKAPKCPPRP 810
VP + S + P PPRP
Sbjct: 364 VPATKSGLLPPPPALPPRP 382
>AF511533-1|AAM43933.1| 659|Homo sapiens RALBP1 associated Eps
domain containing protein 2a protein.
Length = 659
Score = 30.3 bits (65), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 577 DTTQLNSRD-ARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAHLNLKNGK*SIE 753
D+ L +R +RS A K+ G P+ PP+PQK H RA N
Sbjct: 448 DSNSLKARPRSRSYSSTSIEEAMKR--GEDPPTPPPRPQK---THSRASSLDLNKVFQPS 502
Query: 754 VPTSTSKMGSKAPKCPPRP 810
VP + S + P PPRP
Sbjct: 503 VPATKSGLLPPPPALPPRP 521
>AF010233-1|AAC02901.1| 521|Homo sapiens RalBP1-interacting protein
protein.
Length = 521
Score = 30.3 bits (65), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 577 DTTQLNSRD-ARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAHLNLKNGK*SIE 753
D+ L +R +RS A K+ G P+ PP+PQK H RA N
Sbjct: 310 DSNSLKARPRSRSYSSTSIEEAMKR--GEDPPTPPPRPQK---THSRASSLDLNKVFQPS 364
Query: 754 VPTSTSKMGSKAPKCPPRP 810
VP + S + P PPRP
Sbjct: 365 VPATKSGLLPPPPALPPRP 383
>AB208937-1|BAD92174.1| 514|Homo sapiens RalBP1 associated Eps
domain containing protein 2 variant protein.
Length = 514
Score = 30.3 bits (65), Expect = 9.4
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 577 DTTQLNSRD-ARSGRIRIYHTAQKK*TGSKAPSCPPQPQKWEVKHRRAHLNLKNGK*SIE 753
D+ L +R +RS A K+ G P+ PP+PQK H RA N
Sbjct: 356 DSNSLKARPRSRSYSSTSIEEAMKR--GEDPPTPPPRPQK---THSRASSLDLNKVFQPS 410
Query: 754 VPTSTSKMGSKAPKCPPRP 810
VP + S + P PPRP
Sbjct: 411 VPATKSGLLPPPPALPPRP 429
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,372,688
Number of Sequences: 237096
Number of extensions: 2937441
Number of successful extensions: 6942
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6881
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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