Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10d22
(377 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 164 6e-40
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 140 6e-33
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 130 1e-29
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 109 2e-23
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 103 1e-21
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 100 8e-21
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 93 2e-18
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 92 3e-18
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 85 3e-16
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 83 2e-15
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 83 2e-15
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 79 4e-14
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 78 5e-14
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 77 1e-13
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 77 1e-13
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 74 8e-13
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 71 9e-12
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 69 2e-11
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 68 5e-11
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 65 4e-10
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 64 1e-09
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 63 2e-09
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 61 6e-09
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 60 2e-08
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 58 5e-08
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 51 6e-06
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 48 4e-05
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 47 1e-04
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 47 1e-04
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 43 0.002
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 39 0.035
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 37 0.14
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 36 0.33
UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.33
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.58
UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus buty... 33 1.3
UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2; ... 33 1.8
UniRef50_A4RXI9 Cluster: Predicted protein; n=1; Ostreococcus lu... 32 3.1
UniRef50_Q960Q6 Cluster: LD39933p; n=4; Sophophora|Rep: LD39933p... 32 3.1
UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1; ... 32 4.1
UniRef50_UPI00015B6325 Cluster: PREDICTED: similar to RE46851p; ... 31 5.4
UniRef50_UPI00015B56F8 Cluster: PREDICTED: hypothetical protein;... 31 5.4
UniRef50_Q9X010 Cluster: Flagellar biosynthesis protein FlhA; n=... 31 5.4
UniRef50_A1AQQ0 Cluster: Response regulator receiver protein; n=... 31 5.4
UniRef50_A0U4A5 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2; ... 31 5.4
UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1; ... 31 5.4
UniRef50_Q7NLQ1 Cluster: Gll1070 protein; n=1; Gloeobacter viola... 31 7.1
UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 7.1
UniRef50_A4AME9 Cluster: FKBP-type peptidyl-prolyl cis-transisom... 31 7.1
UniRef50_A7QJ50 Cluster: Chromosome chr2 scaffold_105, whole gen... 31 7.1
UniRef50_Q4QBA5 Cluster: Putative uncharacterized protein; n=7; ... 31 7.1
UniRef50_A6SKL1 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_Q97JY8 Cluster: Phage related protein, YonF B.subtilis ... 31 9.4
UniRef50_A0NN85 Cluster: Bacterial regulatory protein, GntR fami... 31 9.4
UniRef50_A7ANM9 Cluster: ATP-dependent protease La family protei... 31 9.4
UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia fuc... 31 9.4
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 164 bits (398), Expect = 6e-40
Identities = 82/115 (71%), Positives = 96/115 (83%), Gaps = 1/115 (0%)
Frame = -2
Query: 346 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 170
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 169 HAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAQA 5
HA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RKA A
Sbjct: 60 HAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRKAQTHA 114
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 140 bits (340), Expect = 6e-33
Identities = 74/113 (65%), Positives = 87/113 (76%)
Frame = -2
Query: 346 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 167
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 166 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAQ 8
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRKAAA+
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAAK 103
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 130 bits (313), Expect = 1e-29
Identities = 62/79 (78%), Positives = 67/79 (84%)
Frame = -2
Query: 250 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIR 71
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 70 AKRKREELSNVLAQMRKAA 14
AKRKREELSN+L QM K A
Sbjct: 63 AKRKREELSNILTQMGKQA 81
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 109 bits (262), Expect = 2e-23
Identities = 56/104 (53%), Positives = 73/104 (70%)
Frame = -2
Query: 328 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 149
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 148 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 17
+E+L++SKDKRALKFLKRR+GTH RAK KREEL NV+ RKA
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRKA 102
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 103 bits (247), Expect = 1e-21
Identities = 56/106 (52%), Positives = 69/106 (65%)
Frame = -2
Query: 340 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 161
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 160 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 23
YEKR ELLKV KDKRALK KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 56 YEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 100 bits (240), Expect = 8e-21
Identities = 56/106 (52%), Positives = 67/106 (63%)
Frame = -2
Query: 322 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 143
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 142 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAQA 5
ELLKV KDKRALK KR+LGTH RAKRKREE+S+VL +MR A
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGGAA 107
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 93.1 bits (221), Expect = 2e-18
Identities = 55/119 (46%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Frame = -2
Query: 358 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVRE 179
+ +I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57
Query: 178 VVGHAQYEKRAMELLK---VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAA 11
V G A YE+ +EL+K S KRALKF K+RLGT RAK K +E+ V+ RK A
Sbjct: 58 VCGFAPYERHMIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRKRKA 116
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 92.3 bits (219), Expect = 3e-18
Identities = 52/113 (46%), Positives = 68/113 (60%)
Frame = -2
Query: 355 SEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREV 176
S A R + G+ KG TT I RP+ KGL+T+ FVR ++REV
Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREV 142
Query: 175 VGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 17
G + YEKR MELL+ SKDK+A K K+RLGT +R+KRK EELS V+ + R+A
Sbjct: 143 AGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRRA 195
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 85.4 bits (202), Expect = 3e-16
Identities = 44/86 (51%), Positives = 59/86 (68%)
Frame = -2
Query: 274 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 95
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 94 RRLGTHIRAKRKREELSNVLAQMRKA 17
+RLGT RAK K EEL++V+ R A
Sbjct: 73 KRLGTLKRAKGKIEELTSVIQSSRLA 98
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 82.6 bits (195), Expect = 2e-15
Identities = 52/110 (47%), Positives = 66/110 (60%)
Frame = -2
Query: 346 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 167
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 166 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 17
Y+ + L KVS DK A KF+K+R+G HI KRK EELS V+A MRKA
Sbjct: 51 MSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRKA 100
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 82.6 bits (195), Expect = 2e-15
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = -2
Query: 220 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 41
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRKRE+++
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAE 87
Query: 40 VLAQMR 23
L R
Sbjct: 88 ALRSKR 93
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 78.6 bits (185), Expect = 4e-14
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Frame = -2
Query: 340 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 161
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 160 YEKRAMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELSN-VLAQMRKAAAQAH 2
YEKR +EL+KV KR+LK+ K++LGTH R K KREE+ V+ Q RKAA H
Sbjct: 57 YEKRLIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRRKAATDKH 113
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 78.2 bits (184), Expect = 5e-14
Identities = 45/109 (41%), Positives = 67/109 (61%)
Frame = -2
Query: 346 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 167
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 166 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 20
+ YE+R ++L++ S +KRA K K+RLG+ RAK K EE++N++A R+
Sbjct: 51 SPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 77.0 bits (181), Expect = 1e-13
Identities = 35/48 (72%), Positives = 44/48 (91%)
Frame = -2
Query: 157 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAA 14
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EELSNVLA +RKAA
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRKAA 103
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 76.6 bits (180), Expect = 1e-13
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = -2
Query: 289 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 113
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 112 ALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAQ 8
ALKF+++ LGTHI AKRK ELSNVLA R+A A+
Sbjct: 75 ALKFIQKMLGTHICAKRKARELSNVLATTREAVAK 109
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 74.1 bits (174), Expect = 8e-13
Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = -2
Query: 217 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREEL 47
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEI 115
Query: 46 SNVLAQMRKAAAQAH 2
V+ R+ AA+ H
Sbjct: 116 QKVVILQRRKAAEKH 130
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 70.5 bits (165), Expect = 9e-12
Identities = 42/96 (43%), Positives = 55/96 (57%)
Frame = -2
Query: 340 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 161
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 160 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKRE 53
YEKR ELLKV KDKRALK + ++G H + ++ E
Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 69.3 bits (162), Expect = 2e-11
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Frame = -2
Query: 337 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 158
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 157 EKRAMELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAQAH 2
EKR +EL K + KD K+A K +RLGT+ R KRK E + N+ MRK H
Sbjct: 56 EKRIIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRKQQQTKH 110
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 68.1 bits (159), Expect = 5e-11
Identities = 42/111 (37%), Positives = 60/111 (54%)
Frame = -2
Query: 352 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 173
E PR I G KG+KTT+ A R D+ L K + V+ ++ ++V
Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56
Query: 172 GHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 20
G + E+R ELL+V KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 57 GFSPMERRVQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 65.3 bits (152), Expect = 4e-10
Identities = 33/74 (44%), Positives = 50/74 (67%)
Frame = -2
Query: 229 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 50
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 49 LSNVLAQMRKAAAQ 8
++N+ RKA+A+
Sbjct: 95 IANI---NRKASAK 105
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 63.7 bits (148), Expect = 1e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = -2
Query: 136 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 41
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 62.9 bits (146), Expect = 2e-09
Identities = 37/107 (34%), Positives = 55/107 (51%)
Frame = -2
Query: 340 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 161
PR I G KGH TT+ + + P + KH + V+ ++ ++VG +
Sbjct: 6 PRTGIIAGFNKGHVTTR----------RPRQPSPNDRFAVPHKHLRAVKAIIADLVGLSP 55
Query: 160 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 20
EKR E L+V K+KRALK+ K+RLG AK+KR ++ L K
Sbjct: 56 LEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEALRHATK 102
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 61.3 bits (142), Expect = 6e-09
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = -2
Query: 211 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 44
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 59.7 bits (138), Expect = 2e-08
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = -2
Query: 247 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 74
+ P R GL + K F R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 73 RAKRKREELSNVLAQ 29
RA +K L V+ +
Sbjct: 71 RAMKKLNTLEEVVQE 85
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 58.0 bits (134), Expect = 5e-08
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = -2
Query: 298 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 128
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 127 SKDKRALKFLKRRLGTHIRA 68
+DK AL+F+ +HIRA
Sbjct: 69 FQDKLALRFMSG--PSHIRA 86
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 51.2 bits (117), Expect = 6e-06
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = -2
Query: 328 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 149
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 148 AMELLKV 128
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 48.4 bits (110), Expect = 4e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = -2
Query: 262 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 113
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 47.2 bits (107), Expect = 1e-04
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -2
Query: 220 QTKHSKFVRDLVR-EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 44
+T+ S+F+ V E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+L+
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
Query: 43 NVLAQ 29
+L +
Sbjct: 102 RMLLE 106
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 46.8 bits (106), Expect = 1e-04
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -2
Query: 130 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 17
V+K + L+ R+LGTH RAKRKREE+SNVL +MR A
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMRSA 57
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 42.7 bits (96), Expect = 0.002
Identities = 23/67 (34%), Positives = 35/67 (52%)
Frame = -2
Query: 217 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNV 38
TK V D++RE G YE+ M+LL+ DK+AL + K+ + + E SNV
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNV 84
Query: 37 LAQMRKA 17
L + K+
Sbjct: 85 LLEAIKS 91
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 38.7 bits (86), Expect = 0.035
Identities = 18/63 (28%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -2
Query: 220 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 44
+T KF + ++ G ++EK+ +K+ +++ALK K++LG RAK+K + ++
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSIN 68
Query: 43 NVL 35
++L
Sbjct: 69 HIL 71
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 36.7 bits (81), Expect = 0.14
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = -2
Query: 367 RICQSEIMAPRFEIAVGLRK--GHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVR 194
R C+S+ A F++ RK KT + + G++ I D ++ + K + K+ R
Sbjct: 30 RFCRSKCHA-NFKMKRQPRKLKWTKTHRAARGKEMIVDSSLVLSQFAKK--RNTPVKYDR 86
Query: 193 DLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 29
+LV + +AME ++ + +R F KRRLG + +RKREE V+A+
Sbjct: 87 NLVAATI-------KAMERVEEIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 35.5 bits (78), Expect = 0.33
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = -2
Query: 214 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 47
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 292
Score = 35.5 bits (78), Expect = 0.33
Identities = 27/88 (30%), Positives = 48/88 (54%)
Frame = -2
Query: 271 GITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 92
G D+ I+ R ++KGL TK+SK ++LV + A++ LKV K K LK ++
Sbjct: 55 GQLDRVIQERETQVKGLTTKNSKRKQELVEAI--------NALKGLKVEKQK-LLKNVQT 105
Query: 91 RLGTHIRAKRKREELSNVLAQMRKAAAQ 8
H R+ +L++ + ++RK+ A+
Sbjct: 106 LKREHNINLRRITDLNSKIVKLRKSVAE 133
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 0.58
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -2
Query: 346 MAPRFEIAVGLRKGHKTTK 290
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_A2BM16 Cluster: Predicted Rad50; n=1; Hyperthermus
butylicus DSM 5456|Rep: Predicted Rad50 - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 887
Score = 33.5 bits (73), Expect = 1.3
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -2
Query: 238 ARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL----GTHIR 71
ARL+ L+T+ +K + H +YE+ EL K+ + + LKRRL +
Sbjct: 532 ARLEELRTEQAKLSERRLELFEKHKEYEEARKELEKLGQAVVEYRVLKRRLEELEKRRVE 591
Query: 70 AKRKREEL 47
A+R REEL
Sbjct: 592 AERLREEL 599
>UniRef50_UPI000038D597 Cluster: COG2319: FOG: WD40 repeat; n=2;
Nostoc punctiforme PCC 73102|Rep: COG2319: FOG: WD40
repeat - Nostoc punctiforme PCC 73102
Length = 1174
Score = 33.1 bits (72), Expect = 1.8
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = -2
Query: 358 QSEIM--APRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLV 185
Q+EI+ P E+ L + + G+T + + + + +QT + +R +
Sbjct: 368 QTEILPQVPWRELLEALESLKGRSLVETAATGLTQQPVIMEYVTEQFIQTIEREMIRGEL 427
Query: 184 REVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE-LSNVLAQMR 23
HA E + + ++ ++ + L L RL TH + + EE L +LAQ+R
Sbjct: 428 NLFKNHALIEAQTQDYVREAQIQFILHPLVERLFTHFDTQAQLEEQLCKILAQLR 482
>UniRef50_A4RXI9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 1163
Score = 32.3 bits (70), Expect = 3.1
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -2
Query: 205 KFVRDLVRE--VVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLA 32
+F+RD E V AQ K+ E + KR + L RR+ +RA +RE L + A
Sbjct: 606 QFLRDASYENVVSARAQMAKKHEEAENI---KRQNEELARRIEQEVRADEERERLMSEAA 662
Query: 31 QMRKAAAQA 5
++R+ AA+A
Sbjct: 663 KVREEAAKA 671
>UniRef50_Q960Q6 Cluster: LD39933p; n=4; Sophophora|Rep: LD39933p -
Drosophila melanogaster (Fruit fly)
Length = 801
Score = 32.3 bits (70), Expect = 3.1
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = -2
Query: 268 ITDKAIRIRPARLKGLQTKHSK-FVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 92
+T I R R L+T K + RDL++++ ++R++ELL+ K++R + L R
Sbjct: 273 VTGDGIMERNLRSAELETARKKDYQRDLMQQI----DEKRRSIELLR-EKERRQEEALTR 327
Query: 91 RLGTHIRAKRKREELSNVLAQMRKA 17
RL ++ + E+L + KA
Sbjct: 328 RLEAQLKTIQLEEQLEKERVRAEKA 352
>UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 540
Score = 31.9 bits (69), Expect = 4.1
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -2
Query: 196 RDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 26
R+L+ ++G + A+ LLK D + F + R+ H+ A K EE++N+LA++
Sbjct: 62 RELLLTLLGD---HEEAIHLLKEIDDLKKSPFSQFRIARHLGALGKHEEMNNLLARL 115
>UniRef50_UPI00015B6325 Cluster: PREDICTED: similar to RE46851p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE46851p - Nasonia vitripennis
Length = 509
Score = 31.5 bits (68), Expect = 5.4
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 6/113 (5%)
Frame = -2
Query: 343 APRFEIAVGLRKGHKTTKISAGRKGIT---DKAIRIRPARLKGLQTKHSKFVRDLVREVV 173
A R E L+ + K+ A T D+A R+R +L L+ + S+ +L E
Sbjct: 277 ASRLEREKELQLENSAIKLQAAELECTRSRDEAARLRE-QLDKLRAEKSRL--ELALEEA 333
Query: 172 GHAQYEKRAME---LLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 23
H R E L +S+ RALK + L I A+R+ EE++ + +R
Sbjct: 334 QHDADRAREAEKRTALSLSETNRALKSAEEELALRIDAERRIEEMAQEIENLR 386
>UniRef50_UPI00015B56F8 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 154
Score = 31.5 bits (68), Expect = 5.4
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Frame = -2
Query: 223 LQTKHSKF---VRDLVR----EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 65
L+ K SKF V+D + ++ G A Y+ + ELLK+ ++ ALK R +RA
Sbjct: 48 LEDKVSKFAQNVKDKITNWWDKITGRAAYKAKQQELLKLKQEYEALKEESERA---VRA- 103
Query: 64 RKREELSNVLAQMRKAAAQ 8
K+E VLA+ K A+
Sbjct: 104 -KKEAWQKVLAENEKRLAE 121
>UniRef50_Q9X010 Cluster: Flagellar biosynthesis protein FlhA; n=5;
Thermotogaceae|Rep: Flagellar biosynthesis protein FlhA
- Thermotoga maritima
Length = 678
Score = 31.5 bits (68), Expect = 5.4
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -2
Query: 232 LKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKRE 53
++GL+ K K V DL+ +V+ A+ +K LLK R L + T + + K +
Sbjct: 495 IEGLKEKFPKLVEDLIPDVLKPAEIKKVLQRLLKEGVSIRNLPTI---FETLLESAEKSK 551
Query: 52 ELSNVLAQMRKA 17
++ ++ +RKA
Sbjct: 552 DIDYLVESVRKA 563
>UniRef50_A1AQQ0 Cluster: Response regulator receiver protein; n=2;
Desulfuromonadales|Rep: Response regulator receiver
protein - Pelobacter propionicus (strain DSM 2379)
Length = 217
Score = 31.5 bits (68), Expect = 5.4
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -2
Query: 157 EKRAMELLKVSKDKRALK--FLKRRLGTHIRAKRKREELSNVLAQMRKA 17
E R +E+ V + K +KRR+ TH+ KRK ++L+ A++R+A
Sbjct: 91 ELRGLEIGAVDYITKPFKTAVVKRRIDTHLALKRKTDQLARSNAELREA 139
>UniRef50_A0U4A5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 1489
Score = 31.5 bits (68), Expect = 5.4
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = -2
Query: 250 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYE--KRAMELLKVSKDKRALKFLKRRLGTH 77
R+R R+ GLQ H V DL AQ E +RA E + +RA R+G H
Sbjct: 211 RLRGLRVAGLQAAHRTLVHDLEHAAQARAQQERRRRAAEHVLPQHVRRA-----ERIGDH 265
Query: 76 IRAKRKREEL-SNVLAQMRKA 17
RA E ++ L Q+R A
Sbjct: 266 ERAGAGDERAEADRLPQLRLA 286
>UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 458
Score = 31.5 bits (68), Expect = 5.4
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -2
Query: 184 REVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 47
R++ + EKR E L++ K++ L+ K + +R K+++EEL
Sbjct: 85 RKIKERKEREKREQEELRLKKEQEELRLKKEKEQEELRLKKEQEEL 130
>UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 723
Score = 31.5 bits (68), Expect = 5.4
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 48 SSSRFLLARMCVPNRRFKNFR--ARLSFDTLSNSIALFSY 161
++S L+ R CV RF+ FR +R +FDTLS L SY
Sbjct: 489 TNSHDLIMRTCVTYLRFRPFRIDSRNTFDTLSARYPLLSY 528
>UniRef50_Q7NLQ1 Cluster: Gll1070 protein; n=1; Gloeobacter
violaceus|Rep: Gll1070 protein - Gloeobacter violaceus
Length = 163
Score = 31.1 bits (67), Expect = 7.1
Identities = 20/68 (29%), Positives = 37/68 (54%)
Frame = -2
Query: 205 KFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 26
+F R L + H +A +++ V+ ++R L F++ L + A+ + EEL+ L ++
Sbjct: 85 RFAR-LAAQEAAHRADRCQARQVVLVA-ERRMLGFVREALAPLLGAQVRLEELAKDLCKL 142
Query: 25 RKAAAQAH 2
R A QAH
Sbjct: 143 RAAELQAH 150
>UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 416
Score = 31.1 bits (67), Expect = 7.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 253 IRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 161
+R ARL G+QTKH+K D V+ AQ
Sbjct: 286 LRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316
>UniRef50_A4AME9 Cluster: FKBP-type peptidyl-prolyl
cis-transisomerase; n=11; Bacteroidetes|Rep: FKBP-type
peptidyl-prolyl cis-transisomerase - Flavobacteriales
bacterium HTCC2170
Length = 462
Score = 31.1 bits (67), Expect = 7.1
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Frame = -2
Query: 346 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 167
+AP FE+++ +K KI A +K + D+ +RI+ K + K +++
Sbjct: 135 LAPSFEVSLKTKKSLTHYKIVADKKMVNDQVLRIQKQYGKLVSKKEIGKDFEVLGTFANE 194
Query: 166 AQ--YEKRAMELLKVSKDKRALK-FLKRRLGTHIRAKRK 59
A+ K +EL ++ K K+AL L +++G + K K
Sbjct: 195 AEEIENKTTLELDQI-KSKKALDILLGKKVGDIVSLKTK 232
>UniRef50_A7QJ50 Cluster: Chromosome chr2 scaffold_105, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_105, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 241
Score = 31.1 bits (67), Expect = 7.1
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -2
Query: 244 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK-VSKDKRALKFLKRRLGTHIRA 68
R AR K +++ + + +DL E G E+ L K +S DK + ++KR + +
Sbjct: 23 RKARKK-VESMNKRLAKDLNEERRGREAMERVCEVLAKEISSDKAEISWMKREIEEERKM 81
Query: 67 KRKREELSNVLAQMRKAAAQ 8
R E L QM+ A A+
Sbjct: 82 LRMAEVLREERVQMKLADAK 101
>UniRef50_Q4QBA5 Cluster: Putative uncharacterized protein; n=7;
cellular organisms|Rep: Putative uncharacterized protein
- Leishmania major
Length = 1241
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 10 GRLPSSSERARC*VLHASSWRGCVCPIVASRTSEHACLLTP*VTP*PSSHIERVRQLRVL 189
G LP S ++C LH+SSWR C R S ++C + P P + +
Sbjct: 41 GSLPPSPSTSQC-NLHSSSWRSC---RALRRCSSYSCAIPSSADPYPQHGLRGCGHRSEM 96
Query: 190 NHG 198
N G
Sbjct: 97 NRG 99
>UniRef50_A6SKL1 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 713
Score = 31.1 bits (67), Expect = 7.1
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +1
Query: 85 PIVASRTSEHAC----LLTP*VTP*PSSHIERVRQLRVLNHGQTWSVSFED 225
P V SR + H P P PS HI+ RQ R L H QT S SF+D
Sbjct: 273 PRVVSRIATHNTPGFLFAQPARRPGPSPHIQSARQPRTLRH-QTNSFSFDD 322
>UniRef50_Q97JY8 Cluster: Phage related protein, YonF B.subtilis
homolog; n=1; Clostridium acetobutylicum|Rep: Phage
related protein, YonF B.subtilis homolog - Clostridium
acetobutylicum
Length = 589
Score = 30.7 bits (66), Expect = 9.4
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = -2
Query: 205 KFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 26
K++ DL E +A + + ++ +K+SKD +KF + G+ I A ++ SN+ +
Sbjct: 129 KYINDLGEE---NANFAREIIQPIKISKDGAKVKF---KNGSEIEAMAMNKDGSNIRGER 182
Query: 25 RK 20
RK
Sbjct: 183 RK 184
>UniRef50_A0NN85 Cluster: Bacterial regulatory protein, GntR family
protein; n=1; Stappia aggregata IAM 12614|Rep: Bacterial
regulatory protein, GntR family protein - Stappia
aggregata IAM 12614
Length = 215
Score = 30.7 bits (66), Expect = 9.4
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 187 VREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAQ 8
+R +G E + LKV + + AL+ L L + +K +R L + MR+AAA+
Sbjct: 61 IRPRLGIVVAEMNPSDFLKVLEARHALERLVAGLAARLASKDERRTLEAIAEDMREAAAK 120
>UniRef50_A7ANM9 Cluster: ATP-dependent protease La family protein;
n=1; Babesia bovis|Rep: ATP-dependent protease La family
protein - Babesia bovis
Length = 1122
Score = 30.7 bits (66), Expect = 9.4
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = -2
Query: 241 PARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKR 62
P+R+ L S RD ++ ++ +KR +L+V++ ++ + T I K
Sbjct: 441 PSRIADLIAGISMAKRDQLQAILAEVNLDKRLAMVLEVARTDLEFAKVQAEVKTQIEEKM 500
Query: 61 KREELSNVLAQMRK 20
RE+ +L + K
Sbjct: 501 SREQRKYILTEQMK 514
>UniRef50_A6SNX0 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 1521
Score = 30.7 bits (66), Expect = 9.4
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Frame = -2
Query: 304 HKTTKISAGRKGITDKAIRIRPARLK----GLQTKHSKFVRDLVREVVGHAQYEKRAMEL 137
H+ K S T++ IR R A K L + +L EV+G + E R E
Sbjct: 498 HQVIKSSPNNGQQTEENIRQRQAAEKIIRQELNADNEALQAELFGEVIGETEEEMREREE 557
Query: 136 LKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAQA 5
K + +R + +++ KRK+ E RKAA QA
Sbjct: 558 AKRLEAQRVREQKEKQDLIDAERKRKKNEARAKKENERKAAEQA 601
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,864,774
Number of Sequences: 1657284
Number of extensions: 6313000
Number of successful extensions: 16433
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 16170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16409
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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