Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10d22
         (377 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein p...    24   2.1  
AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein p...    24   2.1  
AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    24   2.1  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   4.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   8.6  
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    22   8.6  

>AJ441131-6|CAD29635.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 268 ITDKAI-RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 95
           IT+K + R  P R  G   +  +  R +++++  HA Y      +L  + DK   ++ K
Sbjct: 3   ITEKDLYRDTPVRYLGYANEIGEAFRPVIKKIFVHASYAVAISYVLADTADKSKKQYDK 61


>AJ439398-5|CAD28128.1|  152|Anopheles gambiae putative protein
           protein.
          Length = 152

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -2

Query: 268 ITDKAI-RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 95
           IT+K + R  P R  G   +  +  R +++++  HA Y      +L  + DK   ++ K
Sbjct: 3   ITEKDLYRDTPVRYLGYANEIGEAFRPVIKKIFVHASYAVAISYVLADTADKSKKQYDK 61


>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 39  TLLSSSRFLLARMCVPNRRFKNFRARL-SFDTLSNSIALFSY 161
           +L+  S  L A  CV NR+ +  + RL  +DT + +  +F Y
Sbjct: 101 SLIHPSVVLTAAHCVQNRKIEEVKVRLGEWDTQTKN-EMFDY 141


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 ILMALSVIPLRPADILVVLWPFRR 317
           +L+ L  +PL   +IL   WP  R
Sbjct: 88  LLLCLVTMPLTLVEILTKYWPMGR 111


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 296 CFVAFSQAYCDFKTRSHDFGLTD 364
           C   F + Y D+     +FGL+D
Sbjct: 421 CERIFVRLYADYPAECKEFGLSD 443


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 63  LLARMCVPNRRFKNFRARL-SFDTLSNSIALFSY 161
           L A  CV NR+ +  + RL  +DT + +  +F Y
Sbjct: 1   LTAAHCVQNRKIEEVKVRLGEWDTQTKN-EMFDY 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,539
Number of Sequences: 2352
Number of extensions: 7161
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)