Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10d19
(798 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 349 5e-96
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 349 5e-96
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 349 5e-96
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 349 5e-96
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 349 5e-96
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 347 3e-95
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 54 8e-07
BC058900-1|AAH58900.1| 533|Homo sapiens RABEP2 protein protein. 31 3.6
BC027584-1|AAH27584.1| 369|Homo sapiens RABEP2 protein protein. 31 3.6
AK026935-1|BAB15594.1| 538|Homo sapiens protein ( Homo sapiens ... 31 3.6
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 173/258 (67%), Positives = 203/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSXK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 349 bits (859), Expect = 5e-96
Identities = 172/258 (66%), Positives = 202/258 (78%), Gaps = 4/258 (1%)
Frame = -2
Query: 764 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 585
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 584 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 405
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 404 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 225
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 224 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 45
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGK 240
Query: 44 XXGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 241 ATGDETGAKVERADGYEP 258
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 347 bits (853), Expect = 3e-95
Identities = 171/257 (66%), Positives = 201/257 (78%), Gaps = 4/257 (1%)
Frame = -2
Query: 761 KIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKG 582
K K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKG
Sbjct: 5 KNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKG 64
Query: 581 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 402
RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+I
Sbjct: 65 RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMI 121
Query: 401 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 222
EA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L
Sbjct: 122 EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL 181
Query: 221 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXX 42
+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH
Sbjct: 182 KEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKA 241
Query: 41 XGD----KSERPEGYEP 3
GD K ER +GYEP
Sbjct: 242 TGDETGAKVERADGYEP 258
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 53.6 bits (123), Expect = 8e-07
Identities = 28/53 (52%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Frame = -2
Query: 149 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD----KSERPEGYEP 3
PL DV +RKVK+LK+P+FE+ KLMELH GD K ER +GYEP
Sbjct: 1 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEP 53
>BC058900-1|AAH58900.1| 533|Homo sapiens RABEP2 protein protein.
Length = 533
Score = 31.5 bits (68), Expect = 3.6
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 332 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 156
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 155 IYPLRDVCIRKVKVLKRPRFEISKLMEL 72
LR++ + K ++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>BC027584-1|AAH27584.1| 369|Homo sapiens RABEP2 protein protein.
Length = 369
Score = 31.5 bits (68), Expect = 3.6
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 332 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 156
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 155 IYPLRDVCIRKVKVLKRPRFEISKLMEL 72
LR++ + K ++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>AK026935-1|BAB15594.1| 538|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23282 fis, clone HEP07626. ).
Length = 538
Score = 31.5 bits (68), Expect = 3.6
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = -2
Query: 332 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 156
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 155 IYPLRDVCIRKVKVLKRPRFEISKLMEL 72
LR++ + K ++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,429,323
Number of Sequences: 237096
Number of extensions: 2641126
Number of successful extensions: 10708
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10691
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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