Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10d17
(763 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 25 1.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 25 1.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 25 1.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 25 1.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 25 1.0
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 24 1.3
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.3
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 3.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 3.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 22 7.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 7.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 7.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 7.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 7.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 7.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 7.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 7.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 7.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 7.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 7.1
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 725 NWNRAFYNKSNMDQLIAIVNFLEK 654
N+N + YN +N QL +N++E+
Sbjct: 88 NYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 725 NWNRAFYNKSNMDQLIAIVNFLEK 654
N+N + YN +N QL +N++E+
Sbjct: 88 NYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 725 NWNRAFYNKSNMDQLIAIVNFLEK 654
N+N + YN +N QL +N++E+
Sbjct: 88 NYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 725 NWNRAFYNKSNMDQLIAIVNFLEK 654
N+N + YN +N QL +N++E+
Sbjct: 88 NYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 1.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 725 NWNRAFYNKSNMDQLIAIVNFLEK 654
N+N + YN +N QL +N++E+
Sbjct: 88 NYNYSNYNNNNYKQLCYNINYIEQ 111
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 307 SFNSAKFALVSTAVCLFLLAGIAALSLEDDDVDRSAI 417
S+NS FA++ T + +LE DD R+ I
Sbjct: 206 SYNSDIFAMIGTIFLWLFWPSFNSAALEGDDQQRAII 242
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 582 LLAFGHFAFVLHDRHYVEDIVNVLFFQEIYNSN 680
LL + H + D H E +V+++F N+N
Sbjct: 218 LLLYNHARLMSQDNHSKEYLVSIMFSHYDRNNN 250
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 725 NWNRAFYNKSNMDQLIAIVNFLEK 654
N+N + YN +N QL +N +E+
Sbjct: 88 NYNYSNYNNNNYKQLCYNINHIEQ 111
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -3
Query: 725 NWNRAFYNKSNMDQLIAIVNFLEK 654
N++ +YN +N +L +N++E+
Sbjct: 312 NYSNNYYNNNNYKKLYYNINYIEQ 335
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 93 NYNNNYNNYNKHNYNKLYYNINYIEQ 118
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYIEQ 351
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = -3
Query: 725 NWNRAF--YNKSNMDQLIAIVNFLEK 654
N+N + YNK N ++L +N++E+
Sbjct: 326 NYNNNYNNYNKHNYNKLYYNINYIEQ 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,492
Number of Sequences: 438
Number of extensions: 4299
Number of successful extensions: 25
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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