Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10d12
(787 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical pr... 206 2e-53
AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl prot... 182 3e-46
U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protea... 105 3e-23
U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protea... 105 3e-23
AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic prot... 104 6e-23
AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical... 103 1e-22
AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic prot... 103 1e-22
AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic prot... 103 1e-22
AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical... 102 3e-22
AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical ... 102 3e-22
U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protea... 99 2e-21
Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical pr... 99 3e-21
AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical ... 99 3e-21
U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protea... 96 2e-20
U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protea... 96 2e-20
AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical... 90 1e-18
U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 85 4e-17
AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical ... 83 2e-16
AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical... 82 5e-16
AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical ... 79 3e-15
U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U97000-6|AAC47992.2| 134|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF045642-6|AAC02590.1| 632|Caenorhabditis elegans Hypothetical ... 29 5.0
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 6.6
>Z50755-2|CAA90633.1| 444|Caenorhabditis elegans Hypothetical
protein R12H7.2 protein.
Length = 444
Score = 206 bits (502), Expect = 2e-53
Identities = 99/208 (47%), Positives = 135/208 (64%), Gaps = 1/208 (0%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLVQP-VFSFYLNRDPGATTXXXXXXXGSDPAHYRG 593
ILGMA+ IAV V PVF+ + Q V +FSF+LNR+P + G D Y
Sbjct: 202 ILGMAYPEIAVLGVQPVFNTLFEQKKVPSNLFSFWLNRNPDSEIGGEITFGGIDSRRYVE 261
Query: 592 DLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGAT 413
+ VP+ R YW+F MD V + C+ GC AIADTGTSLIAGP ++EA+ +GA
Sbjct: 262 PITYVPVTRKGYWQFKMDKVVGSGVLGCSNGCQAIADTGTSLIAGPKAQIEAIQNFIGAE 321
Query: 412 AIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVPKP 233
+ G+Y++ C +P LP V+F I G +F+L+G DYVL+V+Q G T+CLSGFM +D+P+
Sbjct: 322 PLIKGEYMISCDKVPTLPPVSFVIGGQEFSLKGEDYVLKVSQGGKTICLSGFMGIDLPER 381
Query: 232 MGPLWILGDVFIGKYYTEFDAGNRQLGF 149
+G LWILGDVFIG+YY+ FD ++GF
Sbjct: 382 VGELWILGDVFIGRYYSVFDFDQNRVGF 409
>AF077544-5|AAK39240.1| 398|Caenorhabditis elegans Aspartyl
protease protein 3 protein.
Length = 398
Score = 182 bits (442), Expect = 3e-46
Identities = 82/211 (38%), Positives = 131/211 (62%), Gaps = 4/211 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLV--QPVFSFYLNRDPG-ATTXXXXXXXGSDPAHY 599
I GM + TI+V+ ++ D + A + +F+F+L+RD T +DP HY
Sbjct: 181 IFGMGWDTISVNKISQPMDQIFANSAICKNQLFAFWLSRDANDITNGGEITLCETDPNHY 240
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
G++ PL+ + YW + SV ++ + + + +I DTGTSL+ GP+ ++ + +G
Sbjct: 241 VGNIAWEPLVSEDYWRIKLASVVIDGTTYTSGPIDSIVDTGTSLLTGPTDVIKKIQHKIG 300
Query: 418 ATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQ-FGHTVCLSGFMALDV 242
+ G+Y V+CS IP LP +TF + G +F L+G DY+L+++ G + CLSGFM +D+
Sbjct: 301 GIPLFNGEYEVECSKIPSLPNITFNLGGQNFDLQGKDYILQMSNGNGGSTCLSGFMGMDI 360
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
P P GPLWILGDVFIG++Y+ FD GN+++GF
Sbjct: 361 PAPAGPLWILGDVFIGRFYSVFDHGNKRVGF 391
>U41746-3|AAO25990.1| 429|Caenorhabditis elegans Aspartyl protease
protein 2, isoformb protein.
Length = 429
Score = 105 bits (253), Expect = 3e-23
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLVQ-PVFSFYLNR--DPGATTXXXXXXXGSDPAHY 599
ILG+AF +IAVD +TP F N + Q LV P+F+ +L D G D +
Sbjct: 217 ILGLAFKSIAVDQITPPFINAINQNLVDLPLFTVFLEHEGDQNGVQGGVYTYGGIDTKNC 276
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ PL TY++F M ++ + S ++G I+DTGTSLI GP V A+ AVG
Sbjct: 277 GPVIAYQPLSSATYYQFKMSAIG-SGSYHSSKGWQVISDTGTSLIGGPKAYVSAIADAVG 335
Query: 418 AT-AIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDV 242
AT +G Y++ CS + + TI + ++ ++ ++ + G C+
Sbjct: 336 ATWRDDYGVYILPCS--AKINTLDITIGNQVYNIDSSNTIIPLGD-GSNNCIYAIFPFS- 391
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI +Y +D G +++GF
Sbjct: 392 SGGFGPSWILGDPFIRQYCNIYDVGTQRVGF 422
>U41746-2|AAO25989.1| 635|Caenorhabditis elegans Aspartyl protease
protein 2, isoforma protein.
Length = 635
Score = 105 bits (253), Expect = 3e-23
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLVQ-PVFSFYLNR--DPGATTXXXXXXXGSDPAHY 599
ILG+AF +IAVD +TP F N + Q LV P+F+ +L D G D +
Sbjct: 423 ILGLAFKSIAVDQITPPFINAINQNLVDLPLFTVFLEHEGDQNGVQGGVYTYGGIDTKNC 482
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ PL TY++F M ++ + S ++G I+DTGTSLI GP V A+ AVG
Sbjct: 483 GPVIAYQPLSSATYYQFKMSAIG-SGSYHSSKGWQVISDTGTSLIGGPKAYVSAIADAVG 541
Query: 418 AT-AIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDV 242
AT +G Y++ CS + + TI + ++ ++ ++ + G C+
Sbjct: 542 ATWRDDYGVYILPCS--AKINTLDITIGNQVYNIDSSNTIIPLGD-GSNNCIYAIFPFS- 597
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI +Y +D G +++GF
Sbjct: 598 SGGFGPSWILGDPFIRQYCNIYDVGTQRVGF 628
Score = 54.4 bits (125), Expect = 9e-08
Identities = 38/121 (31%), Positives = 56/121 (46%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNRDPGATTXXXXXXXGSDPAHYRGD 590
I+G+ F + ++ P F N V Q LV P+F YL P G D +
Sbjct: 81 IMGLGFLANSQQNIYPPFVNAVGQKLVDPIFHVYLGNRPNRA--GQITFGGQDTQNCAKV 138
Query: 589 LVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVGATA 410
PL ++F+M SV+ A G +A++DT +S+I GP V + A GAT+
Sbjct: 139 KQYHPLTTGAAYQFYMTSVSSGAYS-ARNGWTALSDTASSIIYGPKAIVAGIADAAGATS 197
Query: 409 I 407
I
Sbjct: 198 I 198
>AJ009861-1|CAA08899.1| 395|Caenorhabditis elegans aspartic
protease protein.
Length = 395
Score = 104 bits (250), Expect = 6e-23
Identities = 70/212 (33%), Positives = 103/212 (48%), Gaps = 5/212 (2%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFSFYLNRD---PGATTXXXXXXXGSDPAH 602
ILG+ ++ +AVD V P N++AQ L P+F+ +L+R+ T D +
Sbjct: 179 ILGLGWTALAVDQVVPPMQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVN 238
Query: 601 YRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAV 422
+ VPL TYW+F +D+ V + I+DTGTS + P+ V A+
Sbjct: 239 CAKQVTYVPLSAKTYWQFPLDAFAVGTYSETKKD-QVISDTGTSWLGAPNTIVSAIVKQT 297
Query: 421 GATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALD 245
A + Y VDCS + P + FTI G F ++ +YVL + Q G C ++
Sbjct: 298 KAVFDWSTELYTVDCSTMKTQPDLIFTIGGAQFPVKSVEYVLDL-QLGGGKCALAVFSMG 356
Query: 244 VPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI +Y +D GN Q+GF
Sbjct: 357 -SGGFGPSWILGDTFIRQYCNVYDIGNGQIGF 387
>AL132948-17|CAC51056.1| 396|Caenorhabditis elegans Hypothetical
protein Y39B6A.20 protein.
Length = 396
Score = 103 bits (248), Expect = 1e-22
Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFSFYLNRD---PGATTXXXXXXXGSDPAH 602
ILG+ + +AVD V P N++AQ L P+F+ +L+R+ T D +
Sbjct: 180 ILGLGWPALAVDQVVPPMQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVN 239
Query: 601 YRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAV 422
+ VPL TYW+F +D+ V + I+DTGTS + P+ V A+
Sbjct: 240 CAKQVTYVPLSAKTYWQFPLDAFAVGTYSETKKD-QVISDTGTSWLGAPNTIVSAIVKQT 298
Query: 421 GATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALD 245
A + Y VDCS + P + FTI G F ++ +YVL + Q G C ++
Sbjct: 299 KAVFDWSTELYTVDCSTMKTQPDLIFTIGGAQFPVKSVEYVLDL-QLGGGKCALAVFSMG 357
Query: 244 VPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI +Y +D GN Q+GF
Sbjct: 358 -SGGFGPSWILGDTFIRQYCNVYDIGNGQIGF 388
>AF210248-1|AAF19445.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 103 bits (248), Expect = 1e-22
Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFSFYLNRD---PGATTXXXXXXXGSDPAH 602
ILG+ + +AVD V P N++AQ L P+F+ +L+R+ T D +
Sbjct: 180 ILGLGWPALAVDQVVPPMQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVN 239
Query: 601 YRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAV 422
+ VPL TYW+F +D+ V + I+DTGTS + P+ V A+
Sbjct: 240 CAKQVTYVPLSAKTYWQFPLDAFAVGTYSETKKD-QVISDTGTSWLGAPNTIVSAIVKQT 298
Query: 421 GATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALD 245
A + Y VDCS + P + FTI G F ++ +YVL + Q G C ++
Sbjct: 299 KAVFDWSTELYTVDCSTMKTQPDLIFTIGGAQFPVKSVEYVLDL-QLGGGKCALAVFSMG 357
Query: 244 VPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI +Y +D GN Q+GF
Sbjct: 358 -SGGFGPSWILGDTFIRQYCNVYDIGNGQIGF 388
>AF208526-1|AAF19442.1| 396|Caenorhabditis elegans aspartic
protease 1 protein.
Length = 396
Score = 103 bits (248), Expect = 1e-22
Identities = 70/212 (33%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFSFYLNRD---PGATTXXXXXXXGSDPAH 602
ILG+ + +AVD V P N++AQ L P+F+ +L+R+ T D +
Sbjct: 180 ILGLGWPALAVDQVVPPMQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVN 239
Query: 601 YRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAV 422
+ VPL TYW+F +D+ V + I+DTGTS + P+ V A+
Sbjct: 240 CAKQVTYVPLSAKTYWQFPLDAFAVGTYSETKKD-QVISDTGTSWLGAPNTIVSAIVKQT 298
Query: 421 GATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALD 245
A + Y VDCS + P + FTI G F ++ +YVL + Q G C ++
Sbjct: 299 KAVFDWSTELYTVDCSTMKTQPDLIFTIGGAQFPVKSVEYVLDL-QLGGGKCALAVFSMG 357
Query: 244 VPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI +Y +D GN Q+GF
Sbjct: 358 -SGGFGPSWILGDTFIRQYCNVYDIGNGQIGF 388
>AL132948-20|CAD31821.1| 391|Caenorhabditis elegans Hypothetical
protein Y39B6A.24 protein.
Length = 391
Score = 102 bits (244), Expect = 3e-22
Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNRDPGAT---TXXXXXXXGSDPAHY 599
I G+A+ +AVD +TP N+++Q L PVFS +L+R A+ + G D +
Sbjct: 178 IFGLAWPALAVDQITPPMQNLISQ-LDVPVFSVWLDRKIQASHGGSAGMITYGGIDTKNC 236
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCS-AIADTGTSLIAGPSKEVEALNAAV 422
+ VPL TYW+F MD V + G + I+DTG+S I+ P + +
Sbjct: 237 DAGVTYVPLTAKTYWQFKMDGFAVGT--YSQYGYNQVISDTGSSWISAPYAMINDIATQT 294
Query: 421 GATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALD 245
AT + Y V CS + P + FTI G F ++ +Y+L + C L
Sbjct: 295 HATWDEMNEIYTVKCSTMKTQPDLVFTIGGALFPVKSVEYILDIG-LDEGKCALAISPL- 352
Query: 244 VPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
+ GP WILGDVFI +Y +D GN ++GF
Sbjct: 353 MASGFGPSWILGDVFIRQYCNIYDIGNARIGF 384
>AF045640-8|AAC02571.1| 394|Caenorhabditis elegans Hypothetical
protein C11D2.2 protein.
Length = 394
Score = 102 bits (244), Expect = 3e-22
Identities = 70/215 (32%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Frame = -1
Query: 784 RQVRRILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNRD--PGATTXXXXXXXGS 614
+++ ILG+ F+ +AV V P F N V QGLV +P+F+ YL + G
Sbjct: 177 QEIDGILGLGFTDLAVHSVPPPFVNAVEQGLVDEPIFTVYLEHHGIKKEASGGYFTYGGE 236
Query: 613 DPAHYRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEAL 434
DP H + +PL + YW+F M + ++ G I+DTGTS I GP K ++ +
Sbjct: 237 DPDHCGEIITWIPLTKAAYWQFRMQGIGIDNVNEHKNGWEVISDTGTSFIGGPGKVIQDI 296
Query: 433 NAAVGATAIAFG-QYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGF 257
GAT + YV+ CS I +L + I ND T E D + VA + C
Sbjct: 297 ANKYGATYDEYSDSYVIPCSEIKNLRSLKMKI--NDLTFE-IDPINLVAHPDSSECDLTL 353
Query: 256 MALDVPKPMGPLWILGDVFIGKYYTEFDAGNRQLG 152
+ GP WILGD FI ++ D N+++G
Sbjct: 354 FDM-YGGGFGPSWILGDPFIRQFCNIHDIKNKRIG 387
>U97000-3|AAC47996.1| 389|Caenorhabditis elegans Aspartyl protease
protein 6 protein.
Length = 389
Score = 99 bits (238), Expect = 2e-21
Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNRDPGATTXXXXXXXGS--DPAHY 599
ILG+AF+++AVD V P N + QG++ QP+FS +L A D +
Sbjct: 180 ILGLAFTSLAVDGVVPPLINAINQGILDQPLFSVWLEHRGAANNVGGGVFTYGAIDTTNC 239
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ PL TY++F + S + I+DTGTS + GP V+ L A G
Sbjct: 240 GALVAYQPLSSATYYQFKAAGFKLG-SYSNTKTVDVISDTGTSFLGGPQSVVDGLAKAAG 298
Query: 418 ATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDV 242
AT F + Y +DC+ P + TI N ++++ +Y++ G+ CL D
Sbjct: 299 ATYDDFNEVYFIDCAAQPGT--LDITIGTNTYSIQPVNYIVDA---GNGQCLFAAFPFDF 353
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI +Y +D GN+++GF
Sbjct: 354 GG-FGPSWILGDPFIRQYCNIYDIGNKRMGF 383
>Z82092-3|CAB05013.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 99.1 bits (236), Expect = 3e-21
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Frame = -1
Query: 784 RQVRRILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFS-FYLNRDPGA--TTXXXXXXXG 617
R + I G+A+ ++VD VTP N+V+Q L P+F+ F+ RDP + G
Sbjct: 168 RPIDGIFGLAWPALSVDQVTPPMQNLVSQNQLDAPIFTIFFDKRDPDYYYPSNGLITYGG 227
Query: 616 SDPAHYRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEA 437
D + ++ VP+ TYW+F +D V AI DTG+S P +
Sbjct: 228 LDTKNCNANISYVPVSSKTYWQFKVDGFQVGTYNRTVNRDQAIMDTGSSWFGLPYSVIAG 287
Query: 436 LNAAVGATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSG 260
+ AT + Y V CS + LP + FTI F + +YV V T C
Sbjct: 288 IATQTNATWDLYASVYTVPCSTMNSLPDLVFTIGAEKFPISAPEYVEDVGLDDGT-CALA 346
Query: 259 FMALDVPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
+D GP LG++FI +Y + FD GN ++GF
Sbjct: 347 MYGIDA-SGFGPSVTLGNIFIRRYCSVFDVGNARIGF 382
>AL021471-3|CAA16297.1| 638|Caenorhabditis elegans Hypothetical
protein ZK384.3 protein.
Length = 638
Score = 99.1 bits (236), Expect = 3e-21
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Frame = -1
Query: 784 RQVRRILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFS-FYLNRDPGA--TTXXXXXXXG 617
R + I G+A+ ++VD VTP N+V+Q L P+F+ F+ RDP + G
Sbjct: 168 RPIDGIFGLAWPALSVDQVTPPMQNLVSQNQLDAPIFTIFFDKRDPDYYYPSNGLITYGG 227
Query: 616 SDPAHYRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEA 437
D + ++ VP+ TYW+F +D V AI DTG+S P +
Sbjct: 228 LDTKNCNANISYVPVSSKTYWQFKVDGFQVGTYNRTVNRDQAIMDTGSSWFGLPYSVIAG 287
Query: 436 LNAAVGATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSG 260
+ AT + Y V CS + LP + FTI F + +YV V T C
Sbjct: 288 IATQTNATWDLYASVYTVPCSTMNSLPDLVFTIGAEKFPISAPEYVEDVGLDDGT-CALA 346
Query: 259 FMALDVPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
+D GP LG++FI +Y + FD GN ++GF
Sbjct: 347 MYGIDA-SGFGPSVTLGNIFIRRYCSVFDVGNARIGF 382
>U97000-5|AAC47991.1| 393|Caenorhabditis elegans Aspartyl protease
protein 5 protein.
Length = 393
Score = 96.3 bits (229), Expect = 2e-20
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 4/211 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNRDPGATTXXXXXXXGS--DPAHY 599
ILG+AF+++AVDHV P N + QGL+ QP+F+ +L A D +
Sbjct: 182 ILGLAFTSLAVDHVVPPLINAINQGLLDQPLFTVWLEHKGSANDVGGGVFTYGAVDTTNC 241
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ PL TY++F DS + S ++ I+DTGTS + GP V L +A+G
Sbjct: 242 GPVIAYQPLSSATYYQFVADSFKL-GSYSNSKKYQVISDTGTSFLGGPKAVVAGLASALG 300
Query: 418 ATAIA-FGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDV 242
AT + Y V C+ ++ + TI G +++ +Y++ V G T + F +
Sbjct: 301 ATYHSNDDSYYVPCA--TNIGTLDITIGGKVYSINPVNYIVDVG-MGDTCVFAAFAFNNF 357
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI ++ +D G +++GF
Sbjct: 358 --GFGPAWILGDPFIRQFCNIYDIGGQRMGF 386
>U34889-1|AAB06576.1| 388|Caenorhabditis elegans aspartic protease
protein.
Length = 388
Score = 96.3 bits (229), Expect = 2e-20
Identities = 67/211 (31%), Positives = 105/211 (49%), Gaps = 4/211 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNRDPGATTXXXXXXXGS--DPAHY 599
ILG+AF+++AVDHV P N + QGL+ QP+F+ +L A D +
Sbjct: 177 ILGLAFTSLAVDHVVPPLINAINQGLLDQPLFTVWLEHKGSANDVGGGVFTYGAVDTTNC 236
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ PL TY++F DS S ++ I+DTGTS + GP V L +A+G
Sbjct: 237 GPVIAYQPLSSATYYQFVADSFK-RGSYSYSKKYQVISDTGTSFLGGPKAVVAGLASALG 295
Query: 418 ATAIA-FGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDV 242
AT + Y V C+ ++ + TI G +++ +Y++ V G T + F +
Sbjct: 296 ATYHSNDDSYYVPCA--TNIGTLDITIGGKVYSINPVNYIVDVG-MGDTCVFAAFAFNNF 352
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILGD FI ++ +D G +++GF
Sbjct: 353 --GFGPAWILGDPFIRQFCNIYDIGGQRMGF 381
>AL132948-19|CAD31820.1| 395|Caenorhabditis elegans Hypothetical
protein Y39B6A.23 protein.
Length = 395
Score = 90.2 bits (214), Expect = 1e-18
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFSFYLNRDPGAT---TXXXXXXXGSDPAH 602
I G+ + I+VD VTP N+++Q L P+FS +++R + T D +
Sbjct: 180 IFGLGWPAISVDQVTPPMQNLISQKQLDAPLFSIWVDRKLQVSQGGTGGLITYGAVDTKN 239
Query: 601 YRGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAV 422
+ V L TYW+F MD V + Q AI+DTG++ + P+ + A+
Sbjct: 240 CDAQVNYVALSSKTYWQFPMDGVAIGNYAMMKQE-QAISDTGSAWLGLPNPVLNAIVQQT 298
Query: 421 GATAI-AFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALD 245
AT + Y +DCS + P + FTI G + ++ +Y+L + G+ C+ ++
Sbjct: 299 KATYDWNYEIYTLDCSTMQTQPDLVFTIGGMQYPVKSIEYILDLG-LGNGRCVLAMLSYS 357
Query: 244 VPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP ++LG VFI ++ +D GN ++GF
Sbjct: 358 -NTGFGPSYVLGHVFIRQFCNVYDIGNARIGF 388
>U97000-4|AAC47994.1| 395|Caenorhabditis elegans Hypothetical
protein F21F8.4 protein.
Length = 395
Score = 87.0 bits (206), Expect = 1e-17
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNRDPGATTXXXXXXXGS--DPAHY 599
ILG+AF+++AVD VTP N + + ++ QP+F+ +L A D +
Sbjct: 182 ILGLAFTSLAVDGVTPPLINAINKKILDQPLFTVFLEHKGTAKNVGGGVFTYGAVDTTNC 241
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ PL TY++F D + S + I+DTG+SLI GPS + A+G
Sbjct: 242 GPVIAYQPLSSATYYQFVADGFKLG-SYSNNKKSQVISDTGSSLIGGPSAVINGFAQALG 300
Query: 418 ATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDV 242
A + Y + CS + TI GN +++E +Y+L V G T C+ + D
Sbjct: 301 AKYHSDDDAYYLPCSTSKGT--LDITIGGNVYSIEPVNYILDVGM-GDT-CVFAAFSFDF 356
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WI GD FI +Y +D G +++GF
Sbjct: 357 GG-FGPSWIFGDPFIRQYCNIYDIGQQRIGF 386
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 85.4 bits (202), Expect = 4e-17
Identities = 65/211 (30%), Positives = 97/211 (45%), Gaps = 5/211 (2%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQG-LVQPVFSFYL-NRDPGATTXXXXXXXGS-DPAHY 599
I+G+ + +AV+ TP N++ QG L QP F YL N P + G D H
Sbjct: 219 IIGLGWPALAVNQQTPPLFNLMNQGKLDQPYFVVYLANIGPTSQINGGAFTVGGLDTTHC 278
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNA-SRFCAQGCSAIADTGTSLIAGPSKEVEALNAAV 422
++ VPL T+W+F + V+ + S+ G A ADT S I P V +L AV
Sbjct: 279 SSNVDWVPLSTQTFWQFKLGGVSSGSYSQAPNSGWQAAADTAASFIGAPKSVVTSLAKAV 338
Query: 421 GATAIAF-GQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALD 245
GAT + G + +DC + +P + FTI G + + +V+ G C+ F L
Sbjct: 339 GATYVPLTGAFFMDCDAV--VPDIVFTINGKTYNMPSTSFVVSA---GPGPCMFAFYEL- 392
Query: 244 VPKPMGPLWILGDVFIGKYYTEFDAGNRQLG 152
P W+LG F+ Y D + +LG
Sbjct: 393 TAGGFYPAWMLGPPFMRAYCHVHDMKSGRLG 423
>AF016435-2|AAB65877.2| 380|Caenorhabditis elegans Hypothetical
protein F59D6.2 protein.
Length = 380
Score = 83.0 bits (196), Expect = 2e-16
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNRDP--GATTXXXXXXXGSDPAHYR 596
+LG+ + A++ + N++ Q L QP+F+ Y + T D H +
Sbjct: 168 VLGLGWPATALNGTSTTMQNLLPQ-LDQPLFTTYFTKSSVHNGTVGGEITFGAIDTTHCQ 226
Query: 595 GDLVRVPLLRDTYWEFHMDSVNV-NASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ V L D+ W + +D + N SR Q +AI DT +S P+ + + A G
Sbjct: 227 SQINYVRLAYDSLWSYSIDGFSFGNYSR--NQTDTAIPDTTSSYTGVPNLVLAEIVIATG 284
Query: 418 ATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDV 242
A Q Y + CS LP + FTI GN + + +YV+ + LS F
Sbjct: 285 AQYDWNHQAYTLPCSSTATLPDLVFTIGGNSYNVRAVEYVVNLNLPNGQCALSLFGTFS- 343
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLG 152
P GPLW+ GD F+ Y FD GN ++G
Sbjct: 344 -SPSGPLWVFGDNFLRSYCHIFDFGNSRIG 372
>AL132948-18|CAD31819.1| 390|Caenorhabditis elegans Hypothetical
protein Y39B6A.22 protein.
Length = 390
Score = 81.8 bits (193), Expect = 5e-16
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 7/214 (3%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNR---DPGATTXXXXXXXGSDPAHY 599
+LG+A+ +AVD +TP N++ Q L P+F+ +L+R + D +
Sbjct: 177 VLGLAWPPVAVDQITPPMQNLMPQ-LDAPIFTLWLDRVLQGSQGGSGGLITFGAIDTKNC 235
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ V L T+W+F +D V + + + AI+D+G + P + LNA +
Sbjct: 236 DAQVNYVALSSKTFWQFPLDGVAIGSYTSMKKD-QAISDSGDFGLRLP---LAVLNAVIQ 291
Query: 418 ATAIAFGQ----YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMA 251
T + Y +DCS + P + FTI G + ++ +Y+L + G+ C+ M
Sbjct: 292 QTKATYDWTNEFYTLDCSTMQTQPDLVFTIGGMQYPVKSVEYILDLG-LGNGRCVLA-MF 349
Query: 250 LDVPKPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
D GP + G+VF+ +Y FD GN ++GF
Sbjct: 350 TDSSTGFGPSFGFGNVFLRQYCNIFDVGNARIGF 383
>AF016435-1|AAB65878.1| 474|Caenorhabditis elegans Hypothetical
protein F59D6.3 protein.
Length = 474
Score = 79.4 bits (187), Expect = 3e-15
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 4/210 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLVQPVFSFYLNRDP--GATTXXXXXXXGSDPAHYR 596
+LG+ + A++ + N++ Q L Q +F+ Y + T D H +
Sbjct: 262 VLGLGWPATALNGTSTTMQNLLPQ-LDQKLFTTYFTKSNMHNGTAGGDIMFGAIDTTHCQ 320
Query: 595 GDLVRVPLLRDTYWEFHMDSVNVNA-SRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ VPL +++W + +D ++ SR Q + I DT + P+ + + A G
Sbjct: 321 SQVNYVPLAYNSFWSYSVDGFSIGTYSR--TQTETTIPDTSSGWTGVPNVVLAGIVKATG 378
Query: 418 ATAIAFGQ-YVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDV 242
AT Q Y + CS LP + FTI GN + + +YV+ + LS F
Sbjct: 379 ATYDWNHQAYTLPCSSTATLPDMVFTIGGNSYNVRAVEYVVNLNLPNGQCALSLFGT--A 436
Query: 241 PKPMGPLWILGDVFIGKYYTEFDAGNRQLG 152
GP WILGD F+ Y FD GN ++G
Sbjct: 437 ASQSGPAWILGDNFLRSYCHVFDFGNSRIG 466
>U64851-4|AAC47989.1| 389|Caenorhabditis elegans Hypothetical
protein F28A12.4 protein.
Length = 389
Score = 73.3 bits (172), Expect = 2e-13
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Frame = -1
Query: 769 ILGMAFSTIAVDHVTPVFDNMVAQGLV-QPVFSFYLNR--DPGATTXXXXXXXGSDPAHY 599
I G+AF+ +AVD++TP N + QGL+ QP+F+ + + PG + G D H
Sbjct: 181 IFGLAFTALAVDNITPPIINAINQGLLDQPLFTTWFGQRGAPGTSASGAFTYGGLDKNHC 240
Query: 598 RGDLVRVPLLRDTYWEFHMDSVNVNASRFCAQGCSAIADTGTSLIAGPSKEVEALNAAVG 419
+ L +++F ++ S I DT TS + GP ++ L A G
Sbjct: 241 GPVIGYAELTNARHFQFQATGFSL-GSYVSTTTYEVITDTATSFLCGPQAAIDNLAKAAG 299
Query: 418 ATAIAFGQYVVDCSLIPHLPRVTFTIAGNDFTLEGNDYVLRVAQFGHTVCLSGFMALDVP 239
AT Q V + + I ++ + N+Y+L++ CL + +
Sbjct: 300 ATWDPTNQ-VFNIPCDADAGPIKMKIGQFNYVIRANNYILKI---DTNSCLFAAIPQNY- 354
Query: 238 KPMGPLWILGDVFIGKYYTEFDAGNRQLGF 149
GP WILG F+ +Y D G +++GF
Sbjct: 355 AGFGPSWILGGPFMRQYCNVHDIGQKRVGF 384
>U97000-6|AAC47992.2| 134|Caenorhabditis elegans Hypothetical
protein F21F8.2 protein.
Length = 134
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = -1
Query: 490 IADTGTSLIAGPSKEVEALNAAVGATAI-AFGQYVVDCSLIPHLPRVTFTIAGNDFTLEG 314
+ DTGTS IA P + + +GAT Y V C+ P + I N + +E
Sbjct: 19 MTDTGTSFIAAPFYVLNEIIVTLGATYDNTTKSYYVSCN--SEKPNLNIVIGNNIYVVEP 76
Query: 313 NDYVLRVAQFGHTVCLSGFMALDVPKPMGPLWILGDVFIGKYYTEFDAGNRQLG 152
N+YV+ + Q CL L MGP WILG +F+ ++ D GN+Q+G
Sbjct: 77 NNYVIDINQGDK--CLLAISGLS-GYGMGPTWILGTLFMRQFCHVHDIGNQQIG 127
>AF045642-6|AAC02590.1| 632|Caenorhabditis elegans Hypothetical
protein C17H12.12 protein.
Length = 632
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 209 PQDPQRAHGLRHVQ---RHEAGQAHRVPELRHPEHVVVALEREV 331
P+ P+ G+ H++ R E RV L +P H +A+EREV
Sbjct: 414 PERPKFTLGITHLESDIRVEDRLMFRVRALNNPRHYAMAVEREV 457
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -3
Query: 374 HTAPAASH-LYHRRERLHARGQRLRAPGGAIRAHGVPVRLHGAGRAEAHG 228
H SH ++H H G A G HGV HGAG HG
Sbjct: 576 HHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHG 625
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,525,632
Number of Sequences: 27780
Number of extensions: 331007
Number of successful extensions: 996
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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