Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10d07
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 89 4e-18
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 68 8e-12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 68 8e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 68 8e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 68 8e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 68 8e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 68 8e-12
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 63 3e-10
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 63 3e-10
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 2e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 2e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 2e-04
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 40 0.002
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.002
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.002
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.002
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.012
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.012
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.016
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.050
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 35 0.065
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.11
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.11
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.15
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.35
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 32 0.61
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.61
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 31 0.81
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 31 1.1
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 31 1.1
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 31 1.1
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.4
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 31 1.4
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 30 2.5
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 2.5
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 2.5
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 2.5
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 2.5
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 30 2.5
Z81536-11|CAB04363.2| 295|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 3.3
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 3.3
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 4.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 4.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 4.3
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z82055-2|CAB04844.1| 369|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 5.7
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 5.7
AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical... 29 5.7
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 5.7
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 5.7
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 29 5.7
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 29 5.7
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 5.7
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 5.7
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 7.5
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 7.5
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 9.9
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 89.0 bits (211), Expect = 4e-18
Identities = 54/148 (36%), Positives = 69/148 (46%), Gaps = 40/148 (27%)
Frame = -3
Query: 855 RSAFKCNRTGHFARDCKE-EAD----------RCYRCNGTGHIARECAQSPDEP------ 727
R+ +KC + GH +R+C E+D CY C TGH +R+C +
Sbjct: 4 RNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGG 63
Query: 726 ----SCYNCNKTGHIARNCP----EGG-----------RESATQTCYNCNKSGHISRNCP 604
SCYNC GH +R+CP EGG R Q CYNC +SGHISR C
Sbjct: 64 GGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRECT 123
Query: 603 DG----TKTCYVCGKPGHISRECDEARN 532
+ K CY C + GHISR+C N
Sbjct: 124 ESGSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 81.4 bits (192), Expect = 8e-16
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 37/132 (28%)
Frame = -3
Query: 798 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 652
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 651 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRE 550
+CYNC GH SR+CP G + CY CG+ GHISRE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 549 CDEARN*PQPPC 514
C E+ + + C
Sbjct: 122 CTESGSAEEKRC 133
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 68.1 bits (159), Expect = 8e-12
Identities = 39/119 (32%), Positives = 49/119 (41%), Gaps = 17/119 (14%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHI 694
+ F C + GH + DC KE R CY C GH +REC + P E
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGF 218
Query: 693 ARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 547
N GG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 219 GNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -3
Query: 675 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 44.4 bits (100), Expect = 1e-04
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 792 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 679
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -3
Query: 723 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 17/105 (16%)
Frame = -3
Query: 804 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESATQTCYNCN 634
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGG 214
Query: 633 KSGHISRNCPDG--------------TKTCYVCGKPGHISRECDE 541
+G + DG C+ C GH S EC E
Sbjct: 215 GAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 846 FKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 727
F C GH + +C E C+ C GH + EC +P +P
Sbjct: 245 FNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 588 CYVCGKPGHISRECDEARN*PQP 520
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 68.1 bits (159), Expect = 8e-12
Identities = 39/117 (33%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCN 709
+ F C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGG 431
Query: 708 KTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 547
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 432 NDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 6e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -3
Query: 726 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = -3
Query: 831 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 676
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 675 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 541
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 669 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 669 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -3
Query: 831 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 661
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 660 ATQTCYNCNKSG 625
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 15/103 (14%)
Frame = -3
Query: 855 RSAFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP--SC 721
R + C + GH +RDC EE NG G A + + C
Sbjct: 396 RVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKC 455
Query: 720 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 456 FNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 742
+ F C + GH + DC KE R CY C GH +R+C +
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 630 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 520
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 68.1 bits (159), Expect = 8e-12
Identities = 39/117 (33%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCN 709
+ F C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGG 431
Query: 708 KTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 547
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 432 NDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 6e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -3
Query: 726 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = -3
Query: 831 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 676
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 675 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 541
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 669 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 669 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -3
Query: 831 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 661
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 660 ATQTCYNCNKSG 625
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 15/103 (14%)
Frame = -3
Query: 855 RSAFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP--SC 721
R + C + GH +RDC EE NG G A + + C
Sbjct: 396 RVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKC 455
Query: 720 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 456 FNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 742
+ F C + GH + DC KE R CY C GH +R+C +
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 630 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 520
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 68.1 bits (159), Expect = 8e-12
Identities = 39/119 (32%), Positives = 49/119 (41%), Gaps = 17/119 (14%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHI 694
+ F C + GH + DC KE R CY C GH +REC + P E
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGF 218
Query: 693 ARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 547
N GG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 219 GNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -3
Query: 675 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 44.4 bits (100), Expect = 1e-04
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 792 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 679
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -3
Query: 723 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 17/105 (16%)
Frame = -3
Query: 804 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESATQTCYNCN 634
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGG 214
Query: 633 KSGHISRNCPDG--------------TKTCYVCGKPGHISRECDE 541
+G + DG C+ C GH S EC E
Sbjct: 215 GAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 846 FKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 727
F C GH + +C E C+ C GH + EC +P +P
Sbjct: 245 FNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 588 CYVCGKPGHISRECDEARN*PQP 520
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 68.1 bits (159), Expect = 8e-12
Identities = 39/119 (32%), Positives = 49/119 (41%), Gaps = 17/119 (14%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHI 694
+ F C + GH + DC KE R CY C GH +REC + P E
Sbjct: 159 NCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGF 218
Query: 693 ARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 547
N GG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 219 GNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 277
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -3
Query: 675 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 44.4 bits (100), Expect = 1e-04
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -3
Query: 792 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 679
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 243 KCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -3
Query: 723 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
C+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 244 CFNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 282
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 17/105 (16%)
Frame = -3
Query: 804 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRESATQTCYNCN 634
E + C+ C GH + +C + E CYNC + GH +R C E + +T
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGG 214
Query: 633 KSGHISRNCPDG--------------TKTCYVCGKPGHISRECDE 541
+G + DG C+ C GH S EC E
Sbjct: 215 GAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 846 FKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 727
F C GH + +C E C+ C GH + EC +P +P
Sbjct: 245 FNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 588 CYVCGKPGHISRECDEARN*PQP 520
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 68.1 bits (159), Expect = 8e-12
Identities = 39/117 (33%), Positives = 51/117 (43%), Gaps = 15/117 (12%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCYNCN 709
+ F C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGG 431
Query: 708 KTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 547
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 432 NDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 6e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -3
Query: 726 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = -3
Query: 831 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 676
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 675 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 541
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 669 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -3
Query: 669 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 535
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 366 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -3
Query: 831 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 661
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 660 ATQTCYNCNKSG 625
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/103 (30%), Positives = 41/103 (39%), Gaps = 15/103 (14%)
Frame = -3
Query: 855 RSAFKCNRTGHFARDCKEEADRCYRCNGT-------------GHIARECAQSPDEP--SC 721
R + C + GH +RDC EE NG G A + + C
Sbjct: 396 RVCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKC 455
Query: 720 YNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
+NC GH + CPE R C+NC + GH S CP+ K
Sbjct: 456 FNCKGEGHRSAECPEPPRG-----CFNCGEQGHRSNECPNPAK 493
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -3
Query: 852 SAFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 742
+ F C + GH + DC KE R CY C GH +R+C +
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -3
Query: 630 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 520
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 62.9 bits (146), Expect = 3e-10
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Frame = -3
Query: 864 GNVRSAFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIA 691
GN N+ G++ D E C+ C GHI++EC P P C NC + GH A
Sbjct: 549 GNTFGEPSDNQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFA 605
Query: 690 RNCPEGGRESATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN* 529
+C + C NC GH + +C D K C CG+ GH +++C + R
Sbjct: 606 SDCDQ--PRVPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRME 662
Query: 528 PQPPC 514
P PC
Sbjct: 663 PTEPC 667
Score = 62.9 bits (146), Expect = 3e-10
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Frame = -3
Query: 855 RSAFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIA 691
R C GH +++C K + R C C GH A +C Q P P C NC GH A
Sbjct: 570 RGCHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFA 628
Query: 690 RNCPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 547
+C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 629 VDCDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 61.7 bits (143), Expect = 7e-10
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = -3
Query: 840 CNRTGHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP- 679
C + GHFA DC + C C GH A +C Q P P C NC + GH A++C
Sbjct: 598 CEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQN 656
Query: 678 EGGRESATQTCYNCNKSGHISRNCPDGTK 592
E R T+ C C + GH CP K
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = -3
Query: 840 CNRTGHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 730
C + GHFA+DC+ E R C RC GH EC P +
Sbjct: 644 CGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -3
Query: 588 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 496
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 62.9 bits (146), Expect = 3e-10
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 8/125 (6%)
Frame = -3
Query: 864 GNVRSAFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIA 691
GN N+ G++ D E C+ C GHI++EC P P C NC + GH A
Sbjct: 549 GNTFGEPSDNQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFA 605
Query: 690 RNCPEGGRESATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN* 529
+C + C NC GH + +C D K C CG+ GH +++C + R
Sbjct: 606 SDCDQ--PRVPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRME 662
Query: 528 PQPPC 514
P PC
Sbjct: 663 PTEPC 667
Score = 62.9 bits (146), Expect = 3e-10
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Frame = -3
Query: 855 RSAFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIA 691
R C GH +++C K + R C C GH A +C Q P P C NC GH A
Sbjct: 570 RGCHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFA 628
Query: 690 RNCPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 547
+C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 629 VDCDQP--KVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 61.7 bits (143), Expect = 7e-10
Identities = 33/89 (37%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = -3
Query: 840 CNRTGHFARDCKEEA---DRCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCP- 679
C + GHFA DC + C C GH A +C Q P P C NC + GH A++C
Sbjct: 598 CEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQN 656
Query: 678 EGGRESATQTCYNCNKSGHISRNCPDGTK 592
E R T+ C C + GH CP K
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECPTRPK 685
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = -3
Query: 840 CNRTGHFARDCKEEADR------CYRCNGTGHIARECAQSPDE 730
C + GHFA+DC+ E R C RC GH EC P +
Sbjct: 644 CGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.050
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -3
Query: 588 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 496
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 59.3 bits (137), Expect = 4e-09
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Frame = -3
Query: 846 FKCNRTGHFAR-DCKEEADRCYRCNGTGHIARECAQ---SPDEPSCYNCNKTGHIARNCP 679
+K T R D K C+ C GH +C + S + C+ C H C
Sbjct: 211 WKTRETRRIGRQDQKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECK 270
Query: 678 EGGRESATQ-TCYNCNKSGHISRNC--------PDGTKTCYVCGKPGHISRECDE 541
+ G + TC+ C + GHISR+C PDG C VCG H+ R+C E
Sbjct: 271 KKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCGANTHLRRDCPE 324
Score = 54.8 bits (126), Expect = 8e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -3
Query: 726 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 565
+C++C + GH +CP+ S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 564 HISRECDEARN 532
HISR+C + N
Sbjct: 290 HISRDCHQNVN 300
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -3
Query: 852 SAFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEG 673
+ F C + GH +RDC + + Y PD C C H+ R+CPE
Sbjct: 281 TCFVCKQVGHISRDCHQNVNGVY---------------PDGGCCNVCGANTHLRRDCPEL 325
Query: 672 GRESA 658
+ A
Sbjct: 326 AAQKA 330
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -3
Query: 681 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 520
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -3
Query: 792 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 664
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -3
Query: 681 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 520
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -3
Query: 792 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 664
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -3
Query: 681 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 520
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -3
Query: 792 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 664
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -3
Query: 681 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 520
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.050
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -3
Query: 792 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 664
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 657 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 517
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -3
Query: 864 GNVRSAFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 745
G + F C + GH A +C C C H A ECA
Sbjct: 199 GISNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 726 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 657 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 517
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 35.5 bits (78), Expect = 0.050
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -3
Query: 864 GNVRSAFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 745
G + F C + GH A +C C C H A ECA
Sbjct: 199 GISNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 726 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 592
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/119 (26%), Positives = 40/119 (33%), Gaps = 2/119 (1%)
Frame = -3
Query: 864 GNVRSAFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARN 685
G CN H C E D + C G H ++C + C C + R
Sbjct: 411 GKTPKEVSCNPCAHEKYSCGSECDGMFSC-GIHHCTKKC----HDKECGECETGANRIRT 465
Query: 684 CPEGGR--ESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQPPC 514
CP G +S T C + D TC GK H +C E P PPC
Sbjct: 466 CPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCGTPGKNHHCREKCHEG---PCPPC 521
Score = 31.5 bits (68), Expect = 0.81
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Frame = +3
Query: 597 CRRDSCGRCGRTC-----CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRA 758
C CG C C R+ Q+ R P+C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPG 504
Query: 759 LCAPCRYICSNGQPLPCNPSQSVLCGC 839
CR C G PCN + SV+C C
Sbjct: 505 KNHHCREKCHEGPCPPCNLNTSVICRC 531
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/91 (34%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Frame = +3
Query: 597 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNTTARPGSVRTRALCAPC 773
C S G CG+TCC APP S CG P C C V T C C
Sbjct: 66 CGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCKCC 114
Query: 774 RYICSNGQPLPCNPSQSVLCGCT*KHFSRCR 866
+ +C+N C CGCT SR R
Sbjct: 115 QPVCTNA----CTNGGGCSCGCTRGGCSRKR 141
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 744 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 568
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 567 GHISREC 547
GHI+ C
Sbjct: 684 GHIAWNC 690
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 798 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 628
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 627 GHISRNCP 604
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 798 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 676
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 653 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 692
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 843 KCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 724
+C ++G C + +R C+RCN GHIA C + + S
Sbjct: 658 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 744 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 568
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 567 GHISREC 547
GHI+ C
Sbjct: 587 GHIAWNC 593
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 798 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 628
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 627 GHISRNCP 604
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 798 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 676
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 556 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 595
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 843 KCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 724
+C ++G C + +R C+RCN GHIA C + + S
Sbjct: 561 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -3
Query: 744 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 568
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 567 GHISREC 547
GHI+ C
Sbjct: 598 GHIAWNC 604
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 798 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 628
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 627 GHISRNCP 604
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 798 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 676
+ +C C +G C + + +C+ CN+ GHIA NCP+
Sbjct: 567 SQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIAWNCPK 606
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 843 KCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 724
+C ++G C + +R C+RCN GHIA C + + S
Sbjct: 572 ECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -3
Query: 726 SCYNCNKTGHIARNCPE-GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRE 550
+C+NC++ GH A CP G+ Q ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 549 C 547
C
Sbjct: 265 C 265
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = -3
Query: 819 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 640
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 639 CNKSGHISRNCPDG 598
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = -3
Query: 840 CNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARNCPE 676
C+ GH A C + R N H + + PD+ + CY C + GH A C +
Sbjct: 209 CHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANRCHK 267
Query: 675 GGRESATQTCY 643
G + T +
Sbjct: 268 GALAFLSNTAH 278
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 723 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 607
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.037
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -3
Query: 828 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 673
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = -3
Query: 648 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 547
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 723 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 607
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.037
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -3
Query: 828 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 673
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = -3
Query: 648 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 547
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.016
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 654 QTCYNCNKSGHISRNCPDG 598
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.050
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -3
Query: 726 SCYNCNKTGHIARNCPEG 673
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 594 KTCYVCGKPGHISREC 547
+ CY C +PGHISR C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 855 RSAFKCNRTGHFARDCKE-EADRCYRCNGTGHI 760
R+ +KC + GH +R+C E+D R G G +
Sbjct: 4 RNCYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.050
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -3
Query: 789 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 625
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.46
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 729 PSCYNCNKTGHIARNCPEGGRES 661
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 4.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 648 CYNCNKSGHISRNCPDGT 595
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 35.1 bits (77), Expect = 0.065
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Frame = +3
Query: 609 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSC---CS--CNTTARPGSVRTRALCAPC 773
+C +C +C + + + +C P C C C T A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 774 RYICSNGQPLPCNPSQSVLCGCT*KHFSRC 863
C+ + C P Q+ CGC +++S C
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGCQ-QNYSPC 319
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -3
Query: 789 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 610
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -3
Query: 789 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 610
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = +3
Query: 600 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNTTARPGSVRTRA 758
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 759 LCAPCRYICSNGQPLP 806
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/86 (25%), Positives = 31/86 (36%)
Frame = +3
Query: 609 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICS 788
S C +C + SA T + C SC SC+ + + PC C+
Sbjct: 172 SSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPCERSCN 231
Query: 789 NGQPLPCNPSQSVLCGCT*KHFSRCR 866
+G C+ S S L C CR
Sbjct: 232 SGCRSTCS-STSTLSVCIPACQQTCR 256
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 762 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 598
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = -3
Query: 855 RSAFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 676
R +C+R GHF C + A AR+ S S Y N +G +N E
Sbjct: 1355 RQCHQCHRIGHFVESCPQRA--------LAKEARKRFGSNSTNSSYRSNDSGRGFKNGEE 1406
Query: 675 GG 670
GG
Sbjct: 1407 GG 1408
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 31.9 bits (69), Expect = 0.61
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = -2
Query: 694 RTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVL-RVRQARPHLARVRRGAELAAAT 518
RT L R G + ++V LP SR +DV+ + RQA P + RRG +++
Sbjct: 643 RTTLPRSGTAQWKNEYSDGEEVTEKLPVESRDWRDVINQQRQAAPGNSADRRGIAATSSS 702
Query: 517 LSPLQSTMYIMMPRTDDKQRTPRATHDNRLQYRCRAASAPQTEE 386
LS L S YI R +K+R + +Y A P E
Sbjct: 703 LSNLPS--YI--NRRMEKEREREIEYRRDREYSMPPADPPVITE 742
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.61
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -3
Query: 738 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 604
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = -3
Query: 789 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 676
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.81
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +3
Query: 612 CGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAP 770
C +C TC ++ Q AP ++ P C C TT + + + CAP
Sbjct: 174 CQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTTCQQFAPVCQQQCAP 224
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Frame = -3
Query: 849 AFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTG------HIAR 688
A CN TG DC + + +C C G ++C Q PS +N G +I
Sbjct: 987 ACDCNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAGCQFCHCNIYG 1042
Query: 687 NCPEGGRESATQTCYNC--NKSGHISRNCPDG 598
+ +G + T C C N G + C DG
Sbjct: 1043 SIEDGKCDQTTGKC-ECRENVEGTMCEKCADG 1073
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Frame = -3
Query: 849 AFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTG------HIAR 688
A CN TG DC + + +C C G ++C Q PS +N G +I
Sbjct: 987 ACDCNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAGCQFCHCNIYG 1042
Query: 687 NCPEGGRESATQTCYNC--NKSGHISRNCPDG 598
+ +G + T C C N G + C DG
Sbjct: 1043 SIEDGKCDQTTGKC-ECRENVEGTMCEKCADG 1073
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Frame = -3
Query: 849 AFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTG------HIAR 688
A CN TG DC + + +C C G ++C Q PS +N G +I
Sbjct: 987 ACDCNDTGSIGSDCDQVSGQC-NCK-QGVFGKQCDQC--RPSYFNFTDAGCQFCHCNIYG 1042
Query: 687 NCPEGGRESATQTCYNC--NKSGHISRNCPDG 598
+ +G + T C C N G + C DG
Sbjct: 1043 SIEDGKCDQTTGKC-ECRENVEGTMCEKCADG 1073
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +3
Query: 609 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 770
S +C TC S S+ TP P + V+C PSC +C + P +V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 771 CRYICSNGQPL-PCNPSQSVLC 833
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 597 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 734
CR C C RTCC + T P CG CC C R
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 121
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 597 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 734
CR C C RTCC + T P CG CC C R
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 124
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = +3
Query: 627 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 779
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 780 --ICSNGQPLPCNPSQ 821
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 30.7 bits (66), Expect = 1.4
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = -3
Query: 861 NVRSAFKCNRTGHFAR-DCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARN 685
++R+A KC+R G+F + C +E C TG +P+C + N +
Sbjct: 571 SLRNAMKCDRAGNFEQYQCDDEGCFCVDI-ATGEELPGSRAIGRKPNCESRNPCEPLVCK 629
Query: 684 --CPEGGRESATQTCYNCN-KSGHISRNCPDGTKTCYVCGKPGHISRECDEARN-*PQPP 517
CP G E + +C C K+ CP G+ C + S +C + N PQP
Sbjct: 630 VACP-FGFERGSNSCPTCKCKNPCKEVKCPQGS-VCVMS------SIQCYQKGNCVPQPR 681
Query: 516 CL 511
C+
Sbjct: 682 CV 683
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -3
Query: 810 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 634
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 633 KSGHISRNCPDGTKTC 586
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -3
Query: 810 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 634
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 633 KSGHISRNCPDGTKTC 586
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Frame = +3
Query: 612 CG--RCGRTCCSYSRSASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAP 770
CG R +CC Y A P PP +S CGPS CC P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
Query: 771 CRYICSNGQPLPCNP 815
+C P+P NP
Sbjct: 130 SPLVCCKQAPVPENP 144
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Frame = +3
Query: 609 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 770
S +C TC S S+ TP P + V+C PSC +C + P V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 771 CRYICSNGQPL-PCNPSQSVLC 833
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 606 PD-GTKTCYVCGKPGHISRECDEAR 535
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 606 PD-GTKTCYVCGKPGHISRECDEAR 535
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 606 PD-GTKTCYVCGKPGHISRECDEAR 535
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Frame = +3
Query: 618 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTARPGSVRTRALCAP-CRYIC-S 788
+C C ++ PP SS C SC C A C P C+ C S
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTICAAACQPSCQSSCSS 351
Query: 789 NGQPL-PCNPSQSVLC 833
N Q + C PS C
Sbjct: 352 NAQCVQACLPSCESSC 367
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 627 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 758
RTCC SA+ P+ S + C P CNT AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>Z81536-11|CAB04363.2| 295|Caenorhabditis elegans Hypothetical
protein F40D4.7 protein.
Length = 295
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 303 CVLNHLNNRD*TIDGVALQFLALQSIYLIYFVQIFLS 193
C N N D T++ VA LAL + +I+F + LS
Sbjct: 198 CKANKTKNNDATMNRVAANRLALIDVIIIFFFDVLLS 234
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 648 CYNCNKSGHISRNCPDGTKTCYVC 577
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 3.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 648 CYNCNKSGHISRNCP 604
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 7.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 723 CYNCNKTGHIARNCPE 676
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -3
Query: 819 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 676
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 3.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 648 CYNCNKSGHISRNCPDGTKTCYVC 577
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/76 (22%), Positives = 26/76 (34%)
Frame = -3
Query: 780 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 601
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 600 GTKTCYVCGKPGHISR 553
CG P +S+
Sbjct: 96 ANWNMQKCGIPHVVSK 111
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +3
Query: 597 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 734
CR C C RTCC +R + CG CC C R
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGCGGGGR 121
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 597 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 734
CRR C C RTCC + T P CG CC C R
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 135
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.1 bits (62), Expect = 4.3
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Frame = +3
Query: 609 SCGR-CGRTC-------CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRAL 761
SC R C R C S S++ +QTP + G C S C+ T R S R
Sbjct: 122 SCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCR-SSCSNRVS 180
Query: 762 CAPCRYICSNGQPLPCNPSQS 824
+ C C N C PSQS
Sbjct: 181 QSTCDATCQNTCSSMC-PSQS 200
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 597 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 734
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 597 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 734
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -3
Query: 804 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 697
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>Z82055-2|CAB04844.1| 369|Caenorhabditis elegans Hypothetical
protein T26H2.2 protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 131 GRSRSSLLIQTHGTPASNLSFDK-KICTKYIKYILCNAKNCNATPSI 268
G SR ++ +G P L +D K +KY C+AK TP +
Sbjct: 174 GVSRKAIRDLFNGVPILQLIYDSDKFPNNVLKYTSCHAKQAKITPGL 220
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Frame = -3
Query: 840 CNRTGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE 676
CN GH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1861 CNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDR 1918
Query: 675 ------GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 577
G + + ++C C +G+ SR+C + CY+C
Sbjct: 1919 CASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = -3
Query: 804 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 637
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 636 NKSGHISRNCPDGTKTC 586
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Frame = -3
Query: 840 CNRTGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE 676
CN GH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1861 CNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDR 1918
Query: 675 ------GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 577
G + + ++C C +G+ SR+C + CY+C
Sbjct: 1919 CASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = -3
Query: 804 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 637
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 636 NKSGHISRNCPDGTKTC 586
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -3
Query: 816 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 640
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 639 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 538
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -3
Query: 816 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 640
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 639 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 538
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -3
Query: 816 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 640
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 639 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 538
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -3
Query: 816 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 640
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 639 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 538
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical
protein Y113G7B.24 protein.
Length = 224
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = -2
Query: 697 HRTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVLRVRQARPHL---ARVRRGAELA 527
HR EL R G D LQ++ + +H+ R + + L + ++ E A
Sbjct: 80 HRVELQRIGFITSDYVRCRLQKIESNPHDAIDQHKK--RKEEGKSDLLSESEMKFAEEYA 137
Query: 526 AATLSPLQSTMYIMMPRTDDKQRTPRATHDNRLQY 422
A + Q T+ MP K PR HD+ + Y
Sbjct: 138 LAESNLFQKTVLEFMPAALKKMPVPRGDHDDVMVY 172
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 5.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 588 CYVCGKPGHISREC 547
CY CGK GH + EC
Sbjct: 411 CYYCGKRGHTANEC 424
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -3
Query: 816 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 640
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 639 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 538
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Frame = -3
Query: 723 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVCGK 571
C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 570 PGHISREC 547
H + C
Sbjct: 372 GNHHTVFC 379
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 28.7 bits (61), Expect = 5.7
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 600 RRDSCGRCGRTCCSYSRSASQTPAP-PRDSSVR-CGPSCCSCNTTARPGSVRTRALCAPC 773
R+ C R G S + SQ+P R+ + R CG SC TT RP + + + C
Sbjct: 88 RQAQCSRPGTGFGSSTPFPSQSPQRCGRNETFRTCGSSCEPSCTTPRPQACTMQCIVNVC 147
Query: 774 RYICSNG 794
+ CS G
Sbjct: 148 Q--CSEG 152
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Frame = -3
Query: 840 CNRTGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE 676
CN GH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1861 CNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDR 1918
Query: 675 ------GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 577
G + + ++C C +G+ SR+C + CY+C
Sbjct: 1919 CASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = -3
Query: 804 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 637
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 636 NKSGHISRNCPDGTKTC 586
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.7 bits (61), Expect = 5.7
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Frame = -3
Query: 840 CNRTGHFARDCKEEADRCYRCN----GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE 676
CN GH+ C C T + A+ C S +E CN K G+ C
Sbjct: 1861 CNE-GHYGNATNGSPYDCMACACPFAPTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDR 1918
Query: 675 ------GGRESATQTCYNCNKSGHI----SRNCPDGTKTCYVC 577
G + + ++C C +G+ SR+C + CY+C
Sbjct: 1919 CASGFFGHPQISGESCSPCQCNGNNNLTDSRSCHPNSGDCYLC 1961
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = -3
Query: 804 EEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNC 637
E C +CNG ++ + P+ CY C N G +C G + C +C
Sbjct: 1932 ESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSC 1990
Query: 636 NKSGHISRNCPDGTKTC 586
S S+ C + + C
Sbjct: 1991 ECSQCGSQYCDNKSGGC 2007
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 672 GRESATQTCYNCNKSGHISRNCP 604
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 672 GRESATQTCYNCNKSGHISRNCP 604
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = -3
Query: 810 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 634
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 633 KSGHISRNCPDGTKTC 586
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 684 CPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN 532
CP ++ QTC + + R C + + C +C P HI+ C A++
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQS 972
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 612 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 698
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,543,395
Number of Sequences: 27780
Number of extensions: 410619
Number of successful extensions: 1850
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1715
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -