Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10d05
         (141 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   2.3  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    21   4.0  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    21   4.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   7.0  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    20   9.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 75   YTPTIGRTYVYDNKY 119
            + PTI RTY  D +Y
Sbjct: 2059 FVPTINRTYSIDYEY 2073


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 44  KKPINNAELFIHPHHRAYLRVRQ*ILQ 124
           KKP+++  LFI  H    L  +Q I +
Sbjct: 48  KKPVHDEHLFIVTHQAYELWFKQIIFE 74


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 44  KKPINNAELFIHPHHRAYLRVRQ*ILQ 124
           KKP+++  LFI  H    L  +Q I +
Sbjct: 48  KKPVHDEHLFIVTHQAYELWFKQIIFE 74


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -1

Query: 111  CRTRKYARWWGCMNNSALF 55
            C+  KY R  GC++  A +
Sbjct: 1019 CKENKYDRHQGCLDCPACY 1037


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 102 VYDNKYYKNLGC 137
           +Y+N YY N  C
Sbjct: 158 IYNNNYYYNYYC 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,347
Number of Sequences: 2352
Number of extensions: 1978
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 26
effective length of database: 502,827
effective search space used: 10056540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)