Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10d05
         (141 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC069254-1|AAH69254.1|  697|Homo sapiens CDCP1 protein protein.        30   1.5  
BC021099-1|AAH21099.1|  343|Homo sapiens CUB domain containing p...    30   1.5  
AY375452-1|AAR21289.1|  691|Homo sapiens membrane glycoprotein g...    30   1.5  
AY358779-1|AAQ89139.1|  343|Homo sapiens AGLN2486 protein.             30   1.5  
AY167484-1|AAO34538.1|  836|Homo sapiens transmembrane and assoc...    30   1.5  
AY026461-1|AAK02058.1|  836|Homo sapiens CUB domain containing p...    30   1.5  
AK026622-1|BAB15511.1|  836|Homo sapiens protein ( Homo sapiens ...    30   1.5  
AF468010-1|AAO33397.1|  836|Homo sapiens NCSG135 protein.              30   1.5  

>BC069254-1|AAH69254.1|  697|Homo sapiens CDCP1 protein protein.
          Length = 697

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 57  IMPNYSYTPTIGRTYVYDNKYYKNLG 134
           + P+ S  PT+ RT+++D K +K++G
Sbjct: 111 LQPSTSLLPTLNRTFIWDVKAHKSIG 136


>BC021099-1|AAH21099.1|  343|Homo sapiens CUB domain containing
           protein 1 protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 57  IMPNYSYTPTIGRTYVYDNKYYKNLG 134
           + P+ S  PT+ RT+++D K +K++G
Sbjct: 111 LQPSTSLLPTLNRTFIWDVKAHKSIG 136


>AY375452-1|AAR21289.1|  691|Homo sapiens membrane glycoprotein
           gp140 protein.
          Length = 691

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 57  IMPNYSYTPTIGRTYVYDNKYYKNLG 134
           + P+ S  PT+ RT+++D K +K++G
Sbjct: 111 LQPSTSLLPTLNRTFIWDVKAHKSIG 136


>AY358779-1|AAQ89139.1|  343|Homo sapiens AGLN2486 protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 57  IMPNYSYTPTIGRTYVYDNKYYKNLG 134
           + P+ S  PT+ RT+++D K +K++G
Sbjct: 111 LQPSTSLLPTLNRTFIWDVKAHKSIG 136


>AY167484-1|AAO34538.1|  836|Homo sapiens transmembrane and
           associated with src kinases protein.
          Length = 836

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 57  IMPNYSYTPTIGRTYVYDNKYYKNLG 134
           + P+ S  PT+ RT+++D K +K++G
Sbjct: 111 LQPSTSLLPTLNRTFIWDVKAHKSIG 136


>AY026461-1|AAK02058.1|  836|Homo sapiens CUB domain containing
           protein 1 protein.
          Length = 836

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 57  IMPNYSYTPTIGRTYVYDNKYYKNLG 134
           + P+ S  PT+ RT+++D K +K++G
Sbjct: 111 LQPSTSLLPTLNRTFIWDVKAHKSIG 136


>AK026622-1|BAB15511.1|  836|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22969 fis, clone KAT10759. ).
          Length = 836

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 57  IMPNYSYTPTIGRTYVYDNKYYKNLG 134
           + P+ S  PT+ RT+++D K +K++G
Sbjct: 111 LQPSTSLLPTLNRTFIWDVKAHKSIG 136


>AF468010-1|AAO33397.1|  836|Homo sapiens NCSG135 protein.
          Length = 836

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 57  IMPNYSYTPTIGRTYVYDNKYYKNLG 134
           + P+ S  PT+ RT+++D K +K++G
Sbjct: 111 LQPSTSLLPTLNRTFIWDVKAHKSIG 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,368,737
Number of Sequences: 237096
Number of extensions: 199746
Number of successful extensions: 560
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 76,859,062
effective HSP length: 27
effective length of database: 70,457,470
effective search space used: 1338691930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)