Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10c18
         (204 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0370 + 15030829-15030837,15031579-15031957,15033434-150336...    29   0.39 
04_03_0381 - 15163425-15164903                                         28   1.2  
04_03_0380 - 15150814-15152304                                         28   1.2  
04_03_0369 + 15012906-15014417                                         28   1.2  
04_03_0348 + 14735581-14737071                                         28   1.2  
04_03_0347 + 14723118-14724548                                         28   1.2  
04_03_0323 - 14364145-14365656                                         28   1.2  
08_02_0607 + 19285580-19286138,19286734-19287668                       27   2.8  
04_03_0354 + 14830325-14830826,14831491-14832416                       27   2.8  
04_03_0353 - 14785648-14787213                                         27   2.8  
02_04_0351 + 22249117-22249624,22249710-22250674                       26   3.6  
08_02_1402 - 26786011-26786128,26786263-26786516,26787505-267877...    25   6.4  

>04_03_0370 +
           15030829-15030837,15031579-15031957,15033434-15033626,
           15033859-15034102,15035383-15035445
          Length = 295

 Score = 29.5 bits (63), Expect = 0.39
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+   + FAEQ+ NC+YK+ E+
Sbjct: 32  VPMLSWLFFAEQQTNCRYKQTEW 54


>04_03_0381 - 15163425-15164903
          Length = 492

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 392 VPMLSWPFFAEQQTNCRYKRTEW 414


>04_03_0380 - 15150814-15152304
          Length = 496

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 398 VPMLSWPFFAEQQTNCRYKRTEW 420


>04_03_0369 + 15012906-15014417
          Length = 503

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 402 VPMLSWPFFAEQQTNCRYKRTEW 424


>04_03_0348 + 14735581-14737071
          Length = 496

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 398 VPMLSWPFFAEQQTNCRYKRTEW 420


>04_03_0347 + 14723118-14724548
          Length = 476

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 376 VPMLSWPFFAEQQTNCRYKRTEW 398


>04_03_0323 - 14364145-14365656
          Length = 503

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 104 VPLSDAITFAEQKLNCKYKKIEF 36
           VP+     FAEQ+ NC+YK+ E+
Sbjct: 402 VPMLSWPFFAEQQTNCRYKRTEW 424


>08_02_0607 + 19285580-19286138,19286734-19287668
          Length = 497

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 80  FAEQKLNCKYKKIEF 36
           FAEQ+ NC+YK+ E+
Sbjct: 417 FAEQQTNCRYKRTEW 431


>04_03_0354 + 14830325-14830826,14831491-14832416
          Length = 475

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 80  FAEQKLNCKYKKIEF 36
           FAEQ+ NC+YK+ E+
Sbjct: 395 FAEQQTNCRYKRTEW 409


>04_03_0353 - 14785648-14787213
          Length = 521

 Score = 26.6 bits (56), Expect = 2.8
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 80  FAEQKLNCKYKKIEF 36
           FAEQ+ NC+YK+ E+
Sbjct: 441 FAEQQTNCRYKRTEW 455


>02_04_0351 + 22249117-22249624,22249710-22250674
          Length = 490

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -2

Query: 80  FAEQKLNCKYKKIEF 36
           FAEQ+ NC+YK +E+
Sbjct: 405 FAEQQTNCRYKCVEW 419


>08_02_1402 -
           26786011-26786128,26786263-26786516,26787505-26787732,
           26788920-26789759
          Length = 479

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 58  QFSFCSANVIASDNGTRPCNIKANN 132
           + SFC   V+ +    RPC IK ++
Sbjct: 404 EISFCDQTVVPTGADQRPCTIKIDS 428


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,701,430
Number of Sequences: 37544
Number of extensions: 42527
Number of successful extensions: 112
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 14,793,348
effective HSP length: 47
effective length of database: 13,028,780
effective search space used: 260575600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)