Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc10c17
(869 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 142 4e-34
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 120 1e-27
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 118 5e-27
L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical p... 109 3e-24
L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical pr... 100 3e-21
Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical ... 45 8e-05
AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical ... 40 0.002
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 38 0.012
Z72502-11|CAH19081.1| 484|Caenorhabditis elegans Hypothetical p... 30 1.9
Z72502-10|CAA96587.1| 447|Caenorhabditis elegans Hypothetical p... 30 1.9
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF003139-4|ABJ99065.1| 78|Caenorhabditis elegans Hypothetical ... 29 4.3
AC024751-10|AAY55884.1| 654|Caenorhabditis elegans Hypothetical... 28 7.5
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 28 10.0
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 28 10.0
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 28 10.0
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 28 10.0
AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical ... 28 10.0
AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical ... 28 10.0
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 142 bits (343), Expect = 4e-34
Identities = 81/215 (37%), Positives = 119/215 (55%), Gaps = 5/215 (2%)
Frame = -2
Query: 760 LQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPK 584
L G + PP + G R+++MRFCPYA+R ++ L KNIP ++V +N D+ P W SP
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIPVEVVNVNPDRSPNWYLPKSPI 144
Query: 583 GTVPALEYEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSA--- 413
G VPALE GK +++SN+I YLDE +P + D +A KILVE +P +A
Sbjct: 145 GRVPALEIN-GKVVWESNVIVEYLDELFPTNTILPRDAYEKAHQKILVERLSPIMNALFE 203
Query: 412 YYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTKYLHGDEPGWVDYTLWPFLERFEAL 233
+Y ++ N QA + + H L + L R T Y G +PG+ DY +WPFLER + L
Sbjct: 204 FYGSSNNPQAQRQNDMNV-HSALRNSENLL--RDTFY-GGRQPGYADYLMWPFLERLQLL 259
Query: 232 PLIGKAEFA-IDKTKYERLVTYIEAMKNVPAVKSY 131
+ ++F Y ++ YI M+N P V +
Sbjct: 260 TMSPNSQFRYFPGLHYPKIGAYIARMQNQPEVLGF 294
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 120 bits (289), Expect = 1e-27
Identities = 71/248 (28%), Positives = 130/248 (52%), Gaps = 8/248 (3%)
Frame = -2
Query: 784 LFNMSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKP 611
L ++ K ++ GD P P SG +R++ MR+CP+A+R ++ + K IP +++ I+LDQKP
Sbjct: 4 LSGLNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKP 63
Query: 610 EWIFNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVES 434
+W F KG VPALE++ GK + +S +I YLD+ YPE + +D + Q K+L++
Sbjct: 64 DWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDR 123
Query: 433 FAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTKYLHG-DEPGWVDYTLWP 257
+ S+ + A + + E + + E + + G +PG+VDY ++P
Sbjct: 124 ISGQLSSAFYGVVQAAKISDLLKEKLVELAKAYDTAEELLTGDFYSGTSKPGFVDYLIYP 183
Query: 256 FLER-FEALPLIGKAEFAIDK---TKYERLVTYIEAMKNVPAVKSYFLAAETHAKFIESR 89
++R F +I ++ Y +L + + + ++P V + ET +F +S
Sbjct: 184 NIQRAFWTSHIIKDFPLKVESFPGPNYPKLSKWYKRLDSIPEVIATSQPTETAVEFFKSW 243
Query: 88 AKGDANYN 65
G N++
Sbjct: 244 IIGAPNFD 251
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical protein
C02D5.3a protein.
Length = 537
Score = 120 bits (289), Expect = 1e-27
Identities = 71/248 (28%), Positives = 130/248 (52%), Gaps = 8/248 (3%)
Frame = -2
Query: 784 LFNMSEKHLQTGDVLP--PYSGKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKP 611
L ++ K ++ GD P P SG +R++ MR+CP+A+R ++ + K IP +++ I+LDQKP
Sbjct: 287 LSGLNTKVVKNGDPAPAPPASGTIRIYNMRYCPWAQRALIFASLKKIPTEVINIHLDQKP 346
Query: 610 EWIFNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVES 434
+W F KG VPALE++ GK + +S +I YLD+ YPE + +D + Q K+L++
Sbjct: 347 DWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYLDDIYPEPRIIPTDHYEKVQQKLLLDR 406
Query: 433 FAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTKYLHG-DEPGWVDYTLWP 257
+ S+ + A + + E + + E + + G +PG+VDY ++P
Sbjct: 407 ISGQLSSAFYGVVQAAKISDLLKEKLVELAKAYDTAEELLTGDFYSGTSKPGFVDYLIYP 466
Query: 256 FLER-FEALPLIGKAEFAIDK---TKYERLVTYIEAMKNVPAVKSYFLAAETHAKFIESR 89
++R F +I ++ Y +L + + + ++P V + ET +F +S
Sbjct: 467 NIQRAFWTSHIIKDFPLKVESFPGPNYPKLSKWYKRLDSIPEVIATSQPTETAVEFFKSW 526
Query: 88 AKGDANYN 65
G N++
Sbjct: 527 IIGAPNFD 534
Score = 99.5 bits (237), Expect = 3e-21
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Frame = -2
Query: 694 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKA-LFDSNIINV 518
P A+R ++ + KNIP D++ ++L +KP+W F+ KG VP LE++ GK + +S +I
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPE 87
Query: 517 YLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKGLEG 338
YLD+ YPE + +DP + Q K+L++ + S + A P + E ++
Sbjct: 88 YLDDIYPETRILPTDPYEKVQQKLLLDRISGQVSPAFYGVVQA-VKNPDLREEKFADIKK 146
Query: 337 LQKELETRSTK--YLHGDEPGWVDYTLWPFLER-FEALPLIGKAEFAIDK---TKYERLV 176
E T Y +PG+VDY L+P ++R + A ++ + Y RL
Sbjct: 147 AYDNAEQLLTGDFYSGTSKPGFVDYLLYPNIQRAYWAAHIVPDFPLEAESFPGPNYPRLS 206
Query: 175 TYIEAMKNVPAVKSYFLAAETHAKFIESRAKGDANYN 65
+ +A++++P V + E F + G NY+
Sbjct: 207 KWYKALESIPEVAAASQPTENGVGFFKDYLGGSPNYD 243
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 118 bits (284), Expect = 5e-27
Identities = 63/184 (34%), Positives = 100/184 (54%), Gaps = 4/184 (2%)
Frame = -2
Query: 784 LFNMSEKHLQTGDVLPPYSGK--LRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKP 611
L ++ K L+TGD+ PP R+++MRFCP A+R ++ + K IP +++ INL QKP
Sbjct: 4 LEGINSKALKTGDLPPPSPSPNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKP 63
Query: 610 EWIFNFSPKGTVPALEYEPGKAL-FDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVES 434
+W F + KG VP LE+ GK L +S +I YLD+ +PE + SDP + Q K+L+E
Sbjct: 64 DWYFTKNYKGQVPTLEHAEGKKLVIESAVIPEYLDDIFPETKILPSDPYEKVQQKLLLER 123
Query: 433 FAPAQSAYYTAAFNAQALEPSMVETYHKGLEGLQK-ELETRSTKYLHGDEPGWVDYTLWP 257
+ + + F A + E + L+ ++ E Y PG+VDY ++P
Sbjct: 124 LSDQLTPAFGRVFRAIKNPEELKEKFESILKAFEEAESLLEGAFYSGTSSPGFVDYLIYP 183
Query: 256 FLER 245
+R
Sbjct: 184 SFQR 187
>L23651-11|AAA27959.1| 250|Caenorhabditis elegans Hypothetical
protein C29E4.7 protein.
Length = 250
Score = 109 bits (261), Expect = 3e-24
Identities = 72/248 (29%), Positives = 121/248 (48%), Gaps = 7/248 (2%)
Frame = -2
Query: 784 LFNMSEKHLQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIPYDLVFINLDQKPE 608
L ++ K ++ GD PP S G RV+ MRFCP+AER +L + AK I ++V +N+ K E
Sbjct: 3 LTGVTSKAIRKGDAEPPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEVVNLNVTDKLE 62
Query: 607 WIFNFSPKGTVPALEYEPGKALFDSNIINVYLDEKYPEIPLQASDPLRRAQDKILVESFA 428
W + +G PA+E+ GK + +S I YLD+ +PE + +DP + Q K+L +
Sbjct: 63 WYWTKHYQGKAPAVEHN-GKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRLT 121
Query: 427 PAQSAYYTAAFNAQALEPSMVETYHKGLEGLQKELETRSTKYLHGDEPGWVDYTLWPFLE 248
A F E K E L++ + + G +PG+ DY +PF E
Sbjct: 122 AVAHA-VPLLFAVMRDRTLKDEKQRKVFEVLKQAENLLANDFYAGSQPGYPDYLSFPFFE 180
Query: 247 R-FEALPLIGKAEFAI----DKTKYERLVTYIEAMKNVPAVKSYFLAAETHAKFIESRA- 86
+ + + L G + + +Y +L + + M + V+S + E A F+ + A
Sbjct: 181 KIWWSASLDGVVDLPTIEFPGEEEYPKLTKWFQKMISSDVVQSVTQSLEHGAAFMNAYAT 240
Query: 85 KGDANYNM 62
+ NY++
Sbjct: 241 HQELNYDL 248
>L16622-2|ABB51199.1| 246|Caenorhabditis elegans Hypothetical
protein C02D5.3b protein.
Length = 246
Score = 99.5 bits (237), Expect = 3e-21
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 7/217 (3%)
Frame = -2
Query: 694 PYAERTVLTLNAKNIPYDLVFINLDQKPEWIFNFSPKGTVPALEYEPGKA-LFDSNIINV 518
P A+R ++ + KNIP D++ ++L +KP+W F+ KG VP LE++ GK + +S +I
Sbjct: 28 PVAQRALIYASVKNIPSDVINVHLQEKPDWYFSKHYKGQVPTLEHDEGKKHVIESAVIPE 87
Query: 517 YLDEKYPEIPLQASDPLRRAQDKILVESFAPAQSAYYTAAFNAQALEPSMVETYHKGLEG 338
YLD+ YPE + +DP + Q K+L++ + S + A P + E ++
Sbjct: 88 YLDDIYPETRILPTDPYEKVQQKLLLDRISGQVSPAFYGVVQA-VKNPDLREEKFADIKK 146
Query: 337 LQKELETRSTK--YLHGDEPGWVDYTLWPFLER-FEALPLIGKAEFAIDK---TKYERLV 176
E T Y +PG+VDY L+P ++R + A ++ + Y RL
Sbjct: 147 AYDNAEQLLTGDFYSGTSKPGFVDYLLYPNIQRAYWAAHIVPDFPLEAESFPGPNYPRLS 206
Query: 175 TYIEAMKNVPAVKSYFLAAETHAKFIESRAKGDANYN 65
+ +A++++P V + E F + G NY+
Sbjct: 207 KWYKALESIPEVAAASQPTENGVGFFKDYLGGSPNYD 243
>Z66560-1|CAA91449.1| 214|Caenorhabditis elegans Hypothetical
protein D1053.1 protein.
Length = 214
Score = 46.4 bits (105), Expect = 3e-05
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Frame = -2
Query: 697 CPYAERTVLTLNAKNIPYDLVFINL--DQKPEWIFNFSPKGTVPALEYEPGKALFDSNII 524
C + R L L KN+ Y+ ++L ++ + +P VP + G+ + +S I
Sbjct: 16 CSWRVRIALAL--KNVDYEYKTVDLLSEEAKSKLKEINPAAKVPTFVVD-GQVITESLAI 72
Query: 523 NVYLDEKYPEIPLQASDPLRRAQDK---ILVES-FAPAQSAYY-------TAAFNAQALE 377
YL+E +P++PL DP++RA + +LV S P + A F Q +
Sbjct: 73 IEYLEETHPDVPLLPKDPIKRAHARAISLLVASGIQPLHNLKVLQLLNKKEAGFGGQFAK 132
Query: 376 PSMVETYHKGLEGLQKELETRSTKYLHGDEPGWVDYTLWPFL 251
+VE GL L+ L+ S KY GD+ D ++ P +
Sbjct: 133 QFVVE----GLTALEILLKQHSGKYAVGDDVTIADLSIPPLI 170
>AF025462-4|AAN72424.1| 123|Caenorhabditis elegans Hypothetical
protein K10F12.4b protein.
Length = 123
Score = 44.8 bits (101), Expect = 8e-05
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -2
Query: 760 LQTGDVLPPYS-GKLRVFAMRFCPYAERTVLTLNAKNIP 647
L G + PP + G R+++MRFCPYA+R ++ L KNIP
Sbjct: 85 LHPGSIEPPLTPGNYRLYSMRFCPYAQRVLIYLAKKNIP 123
>AC006804-5|AAF60754.1| 213|Caenorhabditis elegans Hypothetical
protein Y53G8B.1 protein.
Length = 213
Score = 39.9 bits (89), Expect = 0.002
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Frame = -2
Query: 697 CPYAERTVLTLNAKNIPYDLVFINL--DQKPEWIFNFSPKGTVPALEYEPGKALFDSNII 524
C RT L L K I Y+ +NL QK + +P VP L+ G L +S I
Sbjct: 15 CSSRVRTALAL--KKIDYEYQPVNLLNKQKEQEFHGNNPAEKVPILKIN-GLTLTESMAI 71
Query: 523 NVYLDEKYPEIPLQASDPLRRAQDKI----LVESFAPAQSAYYTAAFNAQALEPSMVETY 356
YLDE YP+ PL +P +A+ + + + P Q+ N + EP + +
Sbjct: 72 IEYLDEIYPDPPLLPKEPELKARARAIAFHIASNIQPLQNKPIYLMLNEK--EPGYGDFW 129
Query: 355 -----HKGLEGLQKELETRSTKYLHGDEPGWVDYTL 263
KG + L++ L+ S + G++ D L
Sbjct: 130 CQHFISKGFKALEELLQMHSGDFCVGNQISIADICL 165
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 37.5 bits (83), Expect = 0.012
Identities = 45/155 (29%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Frame = -2
Query: 688 AERTVLTLNAKNIPYDLVFINL---DQKPEWIF-NFSPKGTVPALEYEPGKALFDSNIIN 521
A R + L KNI Y+ I+L + K F +P VP L G +L +S I
Sbjct: 15 AWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTLVIN-GLSLTESLAII 73
Query: 520 VYLDEKYPEIPLQASDPLRRAQDKI----LVESFAPAQSAYYTAAFNAQALEPSMVETY- 356
YLDE YP+ P + +R+ + +V S P Q+ N + EP + +
Sbjct: 74 EYLDEAYPDPPFLPKELDKRSYSRAIALHIVASIQPLQAINIHKMLNEK--EPGYGDFWC 131
Query: 355 ----HKGLEGLQKELETRSTKYLHGDEPGWVDYTL 263
+KG L++ L+ S KY GD+ D L
Sbjct: 132 NHFVNKGFLALEELLKKHSGKYCVGDQLTIADINL 166
>Z72502-11|CAH19081.1| 484|Caenorhabditis elegans Hypothetical
protein C08B6.4b protein.
Length = 484
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -2
Query: 739 PPYSGKLRVFAMRFCPYAERTV---LTLNAKN--IPYDLVFINLDQKPEW 605
P S +++ F FC Y + TL+ KN +P D +F NL +P+W
Sbjct: 370 PGESRRIKAFKW-FCGYFDTPTGPEATLSCKNMPVPLDQIFYNLSYQPDW 418
>Z72502-10|CAA96587.1| 447|Caenorhabditis elegans Hypothetical
protein C08B6.4a protein.
Length = 447
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -2
Query: 739 PPYSGKLRVFAMRFCPYAERTV---LTLNAKN--IPYDLVFINLDQKPEW 605
P S +++ F FC Y + TL+ KN +P D +F NL +P+W
Sbjct: 333 PGESRRIKAFKW-FCGYFDTPTGPEATLSCKNMPVPLDQIFYNLSYQPDW 381
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 316 RSTKYLHGDEPGWVDYTLWPFLERFEALPLIGKAEFAIDK 197
++T+ LH D P W++ W L+ + + G FAI K
Sbjct: 2073 KTTEDLHADMPSWIEEHFWRCLKWVRSHKISGITSFAILK 2112
>AF003139-4|ABJ99065.1| 78|Caenorhabditis elegans Hypothetical
protein F53G12.13 protein.
Length = 78
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = -2
Query: 313 STKYLHG-DEPGWVDYTLWPFLERFEALPLIGKA---EFAIDKTKYERLVTYIEAMK 155
S KY +EP W+D + L +F+ PL +A +F D+T L+T++ MK
Sbjct: 11 SNKYFFDVNEPSWLDCKAFAVLAQFKYTPLQNEARVKQFMKDRT--PNLMTFVTRMK 65
>AC024751-10|AAY55884.1| 654|Caenorhabditis elegans Hypothetical
protein Y18H1A.15 protein.
Length = 654
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = -2
Query: 274 DYTLWPFLERFEA----LPLIGKAEFAIDKTKYERLVTYIEAMKNVPAVKSYFLAAETHA 107
D++ P ER +P + K +FA+ + + R+ ++ N FL
Sbjct: 178 DHSFMPIKERLHRKLSYIPCLFKRDFAVTENERRRINWFLHDYANFTMFNKLFLKIPAKK 237
Query: 106 KFIESRAK 83
F+E + K
Sbjct: 238 SFVEGKCK 245
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
protein W09C2.3c protein.
Length = 1249
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -2
Query: 367 VETYHKGLEGLQKELETRSTKYLHGDE 287
+ T H+G+EGL K+L+T S L+G++
Sbjct: 59 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 85
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical
protein W09C2.3b protein.
Length = 1228
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -2
Query: 367 VETYHKGLEGLQKELETRSTKYLHGDE 287
+ T H+G+EGL K+L+T S L+G++
Sbjct: 38 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 64
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
protein W09C2.3a protein.
Length = 1252
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -2
Query: 367 VETYHKGLEGLQKELETRSTKYLHGDE 287
+ T H+G+EGL K+L+T S L+G++
Sbjct: 62 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 88
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -2
Query: 367 VETYHKGLEGLQKELETRSTKYLHGDE 287
+ T H+G+EGL K+L+T S L+G++
Sbjct: 59 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 85
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -2
Query: 367 VETYHKGLEGLQKELETRSTKYLHGDE 287
+ T H+G+EGL K+L+T S L+G++
Sbjct: 62 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 88
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -2
Query: 367 VETYHKGLEGLQKELETRSTKYLHGDE 287
+ T H+G+EGL K+L+T S L+G++
Sbjct: 38 LSTEHEGVEGLCKKLKTDSLVGLNGEQ 64
>AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical
protein T22D1.3b protein.
Length = 462
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 517 YLDEKYPEIPLQASDPLRRAQDKILVESFA 428
Y+ EK+P + + A + + RAQ K+L++ A
Sbjct: 307 YIKEKHPHVQVIAGNVVTRAQAKLLIDQGA 336
>AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical
protein T22D1.3a protein.
Length = 534
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 517 YLDEKYPEIPLQASDPLRRAQDKILVESFA 428
Y+ EK+P + + A + + RAQ K+L++ A
Sbjct: 307 YIKEKHPHVQVIAGNVVTRAQAKLLIDQGA 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,652,307
Number of Sequences: 27780
Number of extensions: 413237
Number of successful extensions: 1168
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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