Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10c08
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          25   3.3  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          25   3.3  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          25   3.3  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          25   3.3  
AY752895-1|AAV30069.1|   95|Anopheles gambiae peroxidase 3 protein.    23   7.5  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 365 QPPPLTEQLFCWNN 324
           QPP LTE+L C +N
Sbjct: 268 QPPTLTEELLCKHN 281


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 365 QPPPLTEQLFCWNN 324
           QPP LTE+L C +N
Sbjct: 268 QPPTLTEELLCKHN 281


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 365 QPPPLTEQLFCWNN 324
           QPP LTE+L C +N
Sbjct: 268 QPPTLTEELLCKHN 281


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 365 QPPPLTEQLFCWNN 324
           QPP LTE+L C +N
Sbjct: 268 QPPTLTEELLCKHN 281


>AY752895-1|AAV30069.1|   95|Anopheles gambiae peroxidase 3 protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 439 LPASLRSALRPTSLPVHLLYSCEH 368
           L A +RS   P +  VHLL+  EH
Sbjct: 1   LVADIRSYQSPMAATVHLLFLREH 24


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,384
Number of Sequences: 2352
Number of extensions: 12178
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)