Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc10c05
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.7  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         24   3.6  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     24   3.6  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     24   3.6  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     24   3.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.2  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 13   YMVIYKTWFFKINQYRIYSLKVIIPRNGIKITHQLY 120
            + + YK W+F  +Q   Y + V+I  N I ++ + Y
Sbjct: 1162 HRIQYKVWWFVTSQPFEYMIFVLIMINTITLSMKFY 1197


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 7   FYYMVIYKTWFFKINQYRI 63
           F+ +  YK +FF+I+QY +
Sbjct: 527 FFDLQFYKKYFFEIDQYLV 545


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 7   FYYMVIYKTWFFKINQYRI 63
           F+ +  YK +FF+I+QY +
Sbjct: 527 FFDLQFYKKYFFEIDQYLV 545


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 7   FYYMVIYKTWFFKINQYRI 63
           F+ +  YK +FF+I+QY +
Sbjct: 527 FFDLQFYKKYFFEIDQYLV 545


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 7   FYYMVIYKTWFFKINQYRI 63
           F+ +  YK +FF+I+QY +
Sbjct: 527 FFDLQFYKKYFFEIDQYLV 545


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +2

Query: 509 NVLYKCSISRSQTLVARVIWTHSERKTLY*LITGFQ 616
           N+LY   I  S   V+ + W H++++    + TG Q
Sbjct: 303 NLLYTAKIPNSTYPVSALTWGHNDKRIF--IATGTQ 336


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,702
Number of Sequences: 2352
Number of extensions: 12832
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)